PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:151.7 nTPM
FANTOM5:468.7 Scaled Tags Per Million
Pig:139.0 nTPM
Mouse:359.1 nTPM
Allen mouse:7.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 151.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 56.9
2301 Female, age 85, both hemispheres 76.1
1984 Male, age 76, both hemispheres 68.4
2188 Female, age 91, both hemispheres 48.3
2090 Male, age 80, both hemispheres 34.7
Area postrema
nTPM: 33.2
2054 Male, age 76, both hemispheres 56.1
2799 Male, age 61, both hemispheres 23.1
2306 Male, age 80, both hemispheres 20.3
Dorsal cochlear nucleus
nTPM: 46.8
2187 Female, age 91, both hemispheres 58.6
2058 Male, age 76, both hemispheres 53.5
2370 Male, age 61, both hemispheres 49.8
2378 Male, age 80, both hemispheres 42.8
2802 Male, age 74, right hemisphere 29.1
Dorsal medullary reticular nucleus
nTPM: 69.2
2040 Female, age 85, both hemispheres 105.2
2373 Male, age 61, both hemispheres 53.0
2088 Male, age 76, both hemispheres 49.5
Dorsal motor vagal complex
nTPM: 64.4
2813 Female, age 72, unknown 112.0
2133 Female, age 91, both hemispheres 96.3
2000 Male, age 74, unknown 94.1
2844 Male, age 55, unknown 77.4
2807 Female, age 85, both hemispheres 38.5
2185 Male, age 76, both hemispheres 35.9
2643 Male, age 74, both hemispheres 34.3
2797 Male, age 61, both hemispheres 26.6
Dorsal tegmental nucleus
nTPM: 73.3
2358 Male, age 61, both hemispheres 110.1
2083 Male, age 80, both hemispheres 81.0
1936 Male, age 76, left hemisphere 58.1
2326 Male, age 74, both hemispheres 43.8
Dorsolateral tegmental area
nTPM: 54.5
2141 Male, age 76, both hemispheres 76.5
2751 Female, age 85, both hemispheres 63.6
2654 Male, age 80, both hemispheres 63.0
2360 Male, age 74, both hemispheres 39.5
2337 Male, age 61, both hemispheres 29.7
Gigantocellular reticular nuclei, medullary
nTPM: 64.1
2462 Male, age 74, both hemispheres 83.7
1876 Female, age 85, both hemispheres 79.3
2310 Male, age 80, both hemispheres 74.4
2022 Male, age 76, right hemisphere 65.2
2387 Female, age 91, both hemispheres 41.5
2314 Male, age 61, both hemispheres 40.6
Gigantocellular reticular nuclei, pars
nTPM: 90.9
2168 Male, age 76, both hemispheres 126.8
2084 Female, age 85, both hemispheres 92.3
2336 Male, age 61, both hemispheres 90.0
2330 Male, age 80, both hemispheres 78.0
2706 Male, age 80, both hemispheres 67.2
Inferior olive
nTPM: 34.2
2628 Female, age 91, both hemispheres 57.8
2563 Male, age 74, both hemispheres 47.3
2085 Female, age 85, both hemispheres 28.5
2178 Male, age 61, both hemispheres 19.2
2379 Male, age 80, both hemispheres 18.0
Kolliker-Fuse nucleus
nTPM: 98.1
2163 Male, age 80, both hemispheres 124.6
2793 Female, age 91, left hemisphere 112.8
2315 Male, age 76, right hemisphere 56.7
Lateral lemniscal nuclei
nTPM: 102.3
2169 Male, age 76, both hemispheres 147.2
2036 Male, age 80, both hemispheres 138.4
2320 Female, age 91, left hemisphere 78.0
2746 Female, age 85, left hemisphere 74.2
2453 Male, age 74, right hemisphere 73.7
Lateral medullary reticular nucleus
nTPM: 53.9
2044 Male, age 76, both hemispheres 104.8
2374 Male, age 61, both hemispheres 51.3
2804 Female, age 91, both hemispheres 45.8
2190 Female, age 85, both hemispheres 45.6
2305 Male, age 74, both hemispheres 44.3
2852 Male, age 80, both hemispheres 31.9
Lateral parabrachial nucleus
nTPM: 59.7
2139 Female, age 85, right hemisphere 107.0
2013 Male, age 80, both hemispheres 53.0
2792 Male, age 76, both hemispheres 44.4
2790 Male, age 61, both hemispheres 34.4
Lateral vestibular nucleus
nTPM: 84.0
2184 Male, age 76, both hemispheres 96.5
2311 Male, age 80, both hemispheres 71.5
Locus coeruleus
nTPM: 122.3
2720 Male, age 74, both hemispheres 232.1
2123 Female, age 91, both hemispheres 162.2
2014 Male, age 55, unknown 103.9
2788 Male, age 74, unknown 99.7
1980 Male, age 76, both hemispheres 96.8
2162 Male, age 80, both hemispheres 86.5
2317 Female, age 72, unknown 75.0
Medial olivary nucleus
nTPM: 31.7
2851 Male, age 80, both hemispheres 62.6
1962 Male, age 76, both hemispheres 30.0
2138 Female, age 91, both hemispheres 22.9
1943 Male, age 61, both hemispheres 11.2
Medial parabrachial nucleus
nTPM: 75.1
2854 Male, age 80, both hemispheres 113.1
2156 Male, age 61, both hemispheres 83.5
2170 Female, age 91, both hemispheres 70.5
2786 Male, age 76, both hemispheres 54.8
2463 Female, age 85, right hemisphere 53.6
Medial periolivary nuclei
nTPM: 79.7
2171 Female, age 85, both hemispheres 137.3
2063 Male, age 76, both hemispheres 118.1
2791 Male, age 74, right hemisphere 54.1
2458 Female, age 91, both hemispheres 49.6
2081 Male, age 80, both hemispheres 39.2
Medial vestibular nucleus
nTPM: 99.3
2624 Male, age 61, both hemispheres 152.8
2134 Male, age 76, both hemispheres 102.2
2801 Male, age 74, both hemispheres 95.6
2803 Female, age 91, both hemispheres 91.8
2743 Female, age 85, both hemispheres 80.7
2093 Male, age 80, both hemispheres 73.0
Motor facial nucleus
nTPM: 88.1
2062 Male, age 76, both hemispheres 130.5
2697 Female, age 85, both hemispheres 114.9
2365 Male, age 74, right hemisphere 96.1
2327 Male, age 80, both hemispheres 82.5
2795 Female, age 91, both hemispheres 57.8
2126 Male, age 61, both hemispheres 46.7
Motor hypoglossal nucleus
nTPM: 103.8
2461 Male, age 61, both hemispheres 229.8
2132 Female, age 85, both hemispheres 85.5
2125 Female, age 91, both hemispheres 76.6
2182 Male, age 80, both hemispheres 69.9
2277 Male, age 76, both hemispheres 57.4
Motor trigeminal nucleus
nTPM: 67.1
2079 Male, age 80, both hemispheres 76.3
2335 Male, age 61, both hemispheres 73.4
2309 Male, age 76, both hemispheres 62.7
2321 Female, age 91, both hemispheres 61.8
2560 Male, age 74, both hemispheres 61.1
Nuclei of the trapezoid body
nTPM: 102.0
2159 Male, age 61, both hemispheres 164.1
1983 Male, age 76, both hemispheres 118.6
2735 Female, age 85, both hemispheres 107.7
2166 Male, age 80, both hemispheres 65.6
2368 Female, age 91, both hemispheres 54.0
Nucleus ambiguus
nTPM: 74.6
2096 Female, age 85, both hemispheres 118.2
2071 Male, age 76, both hemispheres 30.9
Nucleus cuneatus
nTPM: 43.4
2131 Male, age 76, both hemispheres 75.4
2100 Male, age 76, both hemispheres 50.7
2562 Male, age 61, both hemispheres 50.5
2381 Male, age 80, both hemispheres 49.2
2564 Male, age 74, both hemispheres 48.7
2376 Male, age 61, both hemispheres 48.3
2805 Female, age 91, both hemispheres 28.6
2808 Female, age 85, both hemispheres 22.0
2380 Male, age 80, both hemispheres 16.8
Nucleus gracilis
nTPM: 22.9
2627 Male, age 74, both hemispheres 31.5
2382 Male, age 80, both hemispheres 19.5
2299 Female, age 85, both hemispheres 17.6
Nucleus raphe magnus
nTPM: 116.6
2160 Male, age 61, both hemispheres 156.7
2455 Male, age 74, both hemispheres 154.0
2172 Female, age 85, both hemispheres 153.2
2328 Male, age 80, both hemispheres 95.1
2051 Male, age 76, both hemispheres 87.3
2459 Female, age 91, both hemispheres 53.1
Nucleus raphe obscurus
nTPM: 30.4
2845 Female, age 85, midline 41.2
2800 Male, age 61, midline 32.2
2142 Male, age 76, midline 17.7
Nucleus raphe pallidus
nTPM: 63.0
2183 Male, age 80, midline 129.0
1924 Male, age 61, midline 37.2
2145 Male, age 76, midline 22.7
Nucleus tractus solitarii
nTPM: 62.2
2656 Male, age 76, both hemispheres 68.2
2144 Female, age 91, right hemisphere 66.6
2307 Male, age 80, both hemispheres 59.8
2191 Female, age 85, both hemispheres 54.0
Paramedian reticular nucleus
nTPM: 90.3
2050 Female, age 85, both hemispheres 114.7
2057 Male, age 80, both hemispheres 99.6
2313 Male, age 61, both hemispheres 94.1
2052 Male, age 76, both hemispheres 52.7
Parvicellular reticular nuclei
nTPM: 72.4
2119 Male, age 80, both hemispheres 77.1
2095 Male, age 76, both hemispheres 74.5
2558 Male, age 74, both hemispheres 65.6
Parvicellular reticular nuclei, medullary
nTPM: 98.7
2189 Female, age 91, both hemispheres 122.0
2091 Female, age 85, both hemispheres 90.2
2181 Male, age 80, left hemisphere 83.9
Pedunculopontine tegmental nucleus
nTPM: 75.6
2334 Male, age 80, both hemispheres 81.2
2338 Male, age 61, both hemispheres 73.1
1921 Female, age 85, both hemispheres 72.5
Peritrigeminal nucleus
nTPM: 85.1
2179 Male, age 61, both hemispheres 95.0
2136 Male, age 76, both hemispheres 82.3
2067 Female, age 85, both hemispheres 77.9
Pontine nuclei
nTPM: 91.7
2787 Female, age 85, both hemispheres 158.5
1863 Male, age 55, unknown 121.2
1968 Male, age 76, left hemisphere 106.9
2727 Male, age 61, right hemisphere 95.9
2109 Female, age 72, unknown 82.6
2454 Male, age 74, left hemisphere 67.1
2115 Male, age 80, left hemisphere 53.4
2319 Female, age 91, both hemispheres 48.0
Pontine raphe nucleus
nTPM: 86.2
2122 Female, age 85, midline 106.5
2853 Male, age 76, midline 66.0
Posteroventral cochlear nucleus
nTPM: 50.8
2752 Female, age 85, both hemispheres 90.6
2070 Male, age 76, both hemispheres 75.8
2371 Male, age 61, both hemispheres 42.2
2341 Male, age 80, both hemispheres 24.6
2135 Female, age 91, both hemispheres 20.8
Prepositus hypoglossal nucleus
nTPM: 54.0
2855 Female, age 85, right hemisphere 63.3
2086 Male, age 80, both hemispheres 44.7
Principal sensory trigeminal nucleus
nTPM: 98.7
2158 Male, age 61, both hemispheres 139.5
2324 Male, age 76, both hemispheres 103.7
2008 Male, age 80, left hemisphere 87.2
2367 Female, age 91, left hemisphere 64.4
Reticular pontine nucleus, caudal
nTPM: 76.0
2332 Male, age 80, right hemisphere 116.3
2092 Male, age 76, both hemispheres 90.3
2559 Male, age 74, both hemispheres 49.8
2457 Female, age 91, both hemispheres 47.5
Reticular pontine nucleus, oral
nTPM: 86.9
2361 Male, age 74, both hemispheres 155.0
2012 Female, age 85, both hemispheres 85.8
1939 Male, age 80, both hemispheres 66.3
2167 Male, age 76, both hemispheres 64.2
2366 Female, age 91, both hemispheres 63.3
Reticulotegmental nucleus
nTPM: 74.5
2325 Male, age 76, both hemispheres 97.4
2333 Male, age 80, both hemispheres 77.2
2322 Female, age 91, both hemispheres 76.5
2452 Male, age 74, both hemispheres 46.6
Spinal trigeminal nucleus, caudal
nTPM: 85.7
2390 Female, age 91, both hemispheres 173.3
2447 Male, age 76, both hemispheres 71.1
2312 Male, age 61, both hemispheres 64.2
2308 Male, age 80, both hemispheres 61.7
2642 Male, age 74, both hemispheres 58.3
Spinal trigeminal nucleus, interpolar
nTPM: 151.7
2625 Male, age 61, both hemispheres 343.3
2066 Male, age 76, right hemisphere 137.0
2389 Female, age 91, both hemispheres 120.6
2033 Male, age 80, both hemispheres 85.2
2386 Female, age 85, both hemispheres 72.4
Spinal trigeminal nucleus, oral
nTPM: 82.6
2737 Female, age 85, both hemispheres 96.3
2164 Male, age 80, both hemispheres 88.8
1978 Male, age 76, both hemispheres 62.8
Spinal vestibular nucleus
nTPM: 73.6
2796 Male, age 61, both hemispheres 95.3
2186 Female, age 91, both hemispheres 94.5
2780 Male, age 80, both hemispheres 86.9
2806 Female, age 85, both hemispheres 68.4
2748 Male, age 76, both hemispheres 65.0
2384 Male, age 74, both hemispheres 31.6
Subcoeruleus area
nTPM: 85.7
2323 Female, age 91, left hemisphere 157.8
1958 Male, age 80, both hemispheres 97.4
2089 Male, age 76, left hemisphere 86.1
2369 Female, age 85, left hemisphere 44.6
2451 Male, age 74, both hemispheres 42.3
Superior olive
nTPM: 80.7
1875 Female, age 85, both hemispheres 100.1
2364 Male, age 74, right hemisphere 81.9
2329 Male, age 80, right hemisphere 81.6
2020 Male, age 76, both hemispheres 74.6
2561 Female, age 91, both hemispheres 65.3
Superior vestibular nucleus
nTPM: 60.4
2015 Male, age 80, both hemispheres 66.7
2061 Male, age 76, both hemispheres 60.0
2383 Male, age 74, both hemispheres 54.6
Ventral medullary reticular nucleus
nTPM: 51.9
2060 Male, age 76, both hemispheres 66.3
2372 Male, age 61, both hemispheres 37.4
Ventral periolivary nuclei
nTPM: 97.3
2130 Female, age 85, both hemispheres 136.4
2165 Male, age 80, both hemispheres 105.9
2794 Female, age 91, left hemisphere 77.5
2023 Male, age 76, both hemispheres 69.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 64.4
1986 Male, age 76, both hemispheres 95.0
2741 Female, age 85, both hemispheres 90.4
2302 Female, age 91, both hemispheres 58.1
2180 Male, age 61, both hemispheres 49.2
2118 Male, age 80, both hemispheres 29.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 78.4
2840 Female, age 85, both hemispheres 130.0
1959 Male, age 76, both hemispheres 91.0
2449 Male, age 74, both hemispheres 82.0
2161 Male, age 80, both hemispheres 66.1
2359 Male, age 61, both hemispheres 59.0
2456 Female, age 91, both hemispheres 42.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 468.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 195.8
FF:10182-103D2 60 years, female 268.1
FF:10165-103B3 76 years, female 123.5
Medulla oblongata
Scaled Tags Per Million: 127.0
FF:10038-101F2 18-64 years, mixed 195.7
FF:10174-103C3 60 years, female 98.4
FF:10155-103A2 76 years, female 87.1
Pons
Scaled Tags Per Million: 468.7
FF:10033-101E6 18-54 years, mixed 468.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 139.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 105.7
Samples: 4

Max nTPM: 129.8
Min nTPM: 59.2
Sample A Female 108.6
Sample B Female 125.2
Sample C Male 129.8
Sample D Male 59.2
Pons
nTPM: 139.0
Samples: 4

Max nTPM: 188.8
Min nTPM: 92.5
Sample A Female 170.6
Sample B Female 92.5
Sample C Male 104.2
Sample D Male 188.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 359.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 359.1
Samples: 4

Max nTPM: 373.7
Min nTPM: 350.2
Sample A Male 359.8
Sample B Male 350.2
Sample C Female 373.7
Sample D Female 352.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 7.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.4
70616005 Antisense, RP_050725_01_D08, Mouse strain C57BL/6J (56 days, male) 9.6
564648 Antisense, RP_040826_01_B04, Mouse strain C57BL/6J (56 days, male) 5.1
Pons
Expression energy: 7.3
70616005 Antisense, RP_050725_01_D08, Mouse strain C57BL/6J (56 days, male) 9.9
564648 Antisense, RP_040826_01_B04, Mouse strain C57BL/6J (56 days, male) 4.8

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