PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:58.8 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Pig:26.5 nTPM
Mouse:37.2 nTPM
Allen mouse:2.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 58.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 30.8
2090 Male, age 80, both hemispheres 36.5
2188 Female, age 91, both hemispheres 31.5
1984 Male, age 76, both hemispheres 30.4
2301 Female, age 85, both hemispheres 24.9
Area postrema
nTPM: 58.8
2054 Male, age 76, both hemispheres 82.9
2799 Male, age 61, both hemispheres 52.9
2306 Male, age 80, both hemispheres 40.6
Dorsal cochlear nucleus
nTPM: 39.0
2058 Male, age 76, both hemispheres 46.5
2370 Male, age 61, both hemispheres 39.3
2187 Female, age 91, both hemispheres 37.1
2378 Male, age 80, both hemispheres 36.8
2802 Male, age 74, right hemisphere 35.1
Dorsal medullary reticular nucleus
nTPM: 42.9
2088 Male, age 76, both hemispheres 50.0
2040 Female, age 85, both hemispheres 42.6
2373 Male, age 61, both hemispheres 36.0
Dorsal motor vagal complex
nTPM: 47.6
2185 Male, age 76, both hemispheres 53.6
2844 Male, age 55, unknown 52.2
2813 Female, age 72, unknown 51.3
2643 Male, age 74, both hemispheres 49.5
2133 Female, age 91, both hemispheres 47.3
2797 Male, age 61, both hemispheres 44.5
2807 Female, age 85, both hemispheres 44.5
2000 Male, age 74, unknown 38.1
Dorsal tegmental nucleus
nTPM: 46.4
2358 Male, age 61, both hemispheres 54.3
1936 Male, age 76, left hemisphere 46.9
2083 Male, age 80, both hemispheres 45.7
2326 Male, age 74, both hemispheres 38.7
Dorsolateral tegmental area
nTPM: 46.2
2337 Male, age 61, both hemispheres 56.7
2141 Male, age 76, both hemispheres 49.8
2360 Male, age 74, both hemispheres 44.3
2654 Male, age 80, both hemispheres 42.5
2751 Female, age 85, both hemispheres 37.9
Gigantocellular reticular nuclei, medullary
nTPM: 37.4
2022 Male, age 76, right hemisphere 46.4
1876 Female, age 85, both hemispheres 39.6
2462 Male, age 74, both hemispheres 37.4
2314 Male, age 61, both hemispheres 37.2
2310 Male, age 80, both hemispheres 32.0
2387 Female, age 91, both hemispheres 32.0
Gigantocellular reticular nuclei, pars
nTPM: 35.0
2084 Female, age 85, both hemispheres 42.5
2336 Male, age 61, both hemispheres 38.5
2330 Male, age 80, both hemispheres 34.6
2706 Male, age 80, both hemispheres 34.3
2168 Male, age 76, both hemispheres 25.2
Inferior olive
nTPM: 40.9
2085 Female, age 85, both hemispheres 44.9
2563 Male, age 74, both hemispheres 43.3
2379 Male, age 80, both hemispheres 42.3
2178 Male, age 61, both hemispheres 38.1
2628 Female, age 91, both hemispheres 36.1
Kolliker-Fuse nucleus
nTPM: 44.8
2315 Male, age 76, right hemisphere 56.4
2163 Male, age 80, both hemispheres 43.7
2793 Female, age 91, left hemisphere 34.2
Lateral lemniscal nuclei
nTPM: 30.1
2453 Male, age 74, right hemisphere 34.8
2746 Female, age 85, left hemisphere 30.5
2036 Male, age 80, both hemispheres 29.4
2320 Female, age 91, left hemisphere 29.4
2169 Male, age 76, both hemispheres 26.4
Lateral medullary reticular nucleus
nTPM: 39.2
2044 Male, age 76, both hemispheres 46.7
2804 Female, age 91, both hemispheres 42.1
2852 Male, age 80, both hemispheres 39.6
2190 Female, age 85, both hemispheres 38.8
2374 Male, age 61, both hemispheres 34.1
2305 Male, age 74, both hemispheres 33.9
Lateral parabrachial nucleus
nTPM: 37.7
2792 Male, age 76, both hemispheres 43.8
2790 Male, age 61, both hemispheres 37.7
2013 Male, age 80, both hemispheres 35.7
2139 Female, age 85, right hemisphere 33.5
Lateral vestibular nucleus
nTPM: 39.8
2184 Male, age 76, both hemispheres 43.3
2311 Male, age 80, both hemispheres 36.4
Locus coeruleus
nTPM: 54.4
2014 Male, age 55, unknown 62.9
1980 Male, age 76, both hemispheres 62.3
2123 Female, age 91, both hemispheres 59.5
2162 Male, age 80, both hemispheres 52.5
2720 Male, age 74, both hemispheres 50.3
2317 Female, age 72, unknown 47.2
2788 Male, age 74, unknown 45.9
Medial olivary nucleus
nTPM: 37.7
2851 Male, age 80, both hemispheres 39.8
1962 Male, age 76, both hemispheres 38.8
2138 Female, age 91, both hemispheres 37.8
1943 Male, age 61, both hemispheres 34.2
Medial parabrachial nucleus
nTPM: 42.4
2463 Female, age 85, right hemisphere 47.7
2786 Male, age 76, both hemispheres 46.2
2156 Male, age 61, both hemispheres 43.4
2170 Female, age 91, both hemispheres 38.9
2854 Male, age 80, both hemispheres 35.9
Medial periolivary nuclei
nTPM: 28.6
2791 Male, age 74, right hemisphere 34.1
2458 Female, age 91, both hemispheres 32.1
2081 Male, age 80, both hemispheres 29.9
2063 Male, age 76, both hemispheres 24.4
2171 Female, age 85, both hemispheres 22.5
Medial vestibular nucleus
nTPM: 39.3
2134 Male, age 76, both hemispheres 50.5
2624 Male, age 61, both hemispheres 41.6
2803 Female, age 91, both hemispheres 37.7
2093 Male, age 80, both hemispheres 37.0
2743 Female, age 85, both hemispheres 35.8
2801 Male, age 74, both hemispheres 33.1
Motor facial nucleus
nTPM: 30.8
2126 Male, age 61, both hemispheres 35.6
2365 Male, age 74, right hemisphere 32.2
2795 Female, age 91, both hemispheres 31.9
2327 Male, age 80, both hemispheres 30.4
2697 Female, age 85, both hemispheres 28.4
2062 Male, age 76, both hemispheres 26.3
Motor hypoglossal nucleus
nTPM: 45.5
2277 Male, age 76, both hemispheres 80.3
2182 Male, age 80, both hemispheres 41.5
2132 Female, age 85, both hemispheres 37.0
2125 Female, age 91, both hemispheres 36.0
2461 Male, age 61, both hemispheres 32.5
Motor trigeminal nucleus
nTPM: 35.7
2309 Male, age 76, both hemispheres 41.8
2335 Male, age 61, both hemispheres 40.1
2560 Male, age 74, both hemispheres 34.2
2079 Male, age 80, both hemispheres 32.0
2321 Female, age 91, both hemispheres 30.1
Nuclei of the trapezoid body
nTPM: 27.9
2166 Male, age 80, both hemispheres 30.0
2368 Female, age 91, both hemispheres 29.1
2735 Female, age 85, both hemispheres 29.1
1983 Male, age 76, both hemispheres 27.6
2159 Male, age 61, both hemispheres 23.8
Nucleus ambiguus
nTPM: 50.2
2096 Female, age 85, both hemispheres 55.3
2071 Male, age 76, both hemispheres 45.1
Nucleus cuneatus
nTPM: 38.5
2564 Male, age 74, both hemispheres 45.1
2562 Male, age 61, both hemispheres 42.2
2131 Male, age 76, both hemispheres 41.4
2805 Female, age 91, both hemispheres 40.6
2100 Male, age 76, both hemispheres 40.0
2808 Female, age 85, both hemispheres 37.9
2381 Male, age 80, both hemispheres 37.3
2376 Male, age 61, both hemispheres 32.6
2380 Male, age 80, both hemispheres 29.5
Nucleus gracilis
nTPM: 40.4
2627 Male, age 74, both hemispheres 41.4
2382 Male, age 80, both hemispheres 40.2
2299 Female, age 85, both hemispheres 39.6
Nucleus raphe magnus
nTPM: 29.3
2328 Male, age 80, both hemispheres 30.2
2455 Male, age 74, both hemispheres 30.0
2160 Male, age 61, both hemispheres 29.8
2172 Female, age 85, both hemispheres 29.8
2459 Female, age 91, both hemispheres 29.4
2051 Male, age 76, both hemispheres 26.6
Nucleus raphe obscurus
nTPM: 43.4
2142 Male, age 76, midline 53.2
2800 Male, age 61, midline 40.6
2845 Female, age 85, midline 36.5
Nucleus raphe pallidus
nTPM: 41.5
2183 Male, age 80, midline 44.9
2145 Male, age 76, midline 40.6
1924 Male, age 61, midline 39.1
Nucleus tractus solitarii
nTPM: 48.2
2656 Male, age 76, both hemispheres 63.7
2307 Male, age 80, both hemispheres 51.1
2191 Female, age 85, both hemispheres 46.1
2144 Female, age 91, right hemisphere 31.7
Paramedian reticular nucleus
nTPM: 41.0
2052 Male, age 76, both hemispheres 50.6
2057 Male, age 80, both hemispheres 44.8
2313 Male, age 61, both hemispheres 38.9
2050 Female, age 85, both hemispheres 29.6
Parvicellular reticular nuclei
nTPM: 36.9
2119 Male, age 80, both hemispheres 44.5
2095 Male, age 76, both hemispheres 34.8
2558 Male, age 74, both hemispheres 31.5
Parvicellular reticular nuclei, medullary
nTPM: 42.7
2189 Female, age 91, both hemispheres 43.9
2091 Female, age 85, both hemispheres 43.5
2181 Male, age 80, left hemisphere 40.8
Pedunculopontine tegmental nucleus
nTPM: 41.2
2334 Male, age 80, both hemispheres 46.4
1921 Female, age 85, both hemispheres 45.0
2338 Male, age 61, both hemispheres 32.1
Peritrigeminal nucleus
nTPM: 39.6
2067 Female, age 85, both hemispheres 43.2
2136 Male, age 76, both hemispheres 41.7
2179 Male, age 61, both hemispheres 33.8
Pontine nuclei
nTPM: 29.3
2115 Male, age 80, left hemisphere 34.9
2454 Male, age 74, left hemisphere 31.4
2787 Female, age 85, both hemispheres 31.3
2319 Female, age 91, both hemispheres 30.3
2727 Male, age 61, right hemisphere 27.5
2109 Female, age 72, unknown 27.0
1863 Male, age 55, unknown 26.2
1968 Male, age 76, left hemisphere 26.0
Pontine raphe nucleus
nTPM: 41.3
2853 Male, age 76, midline 48.1
2122 Female, age 85, midline 34.5
Posteroventral cochlear nucleus
nTPM: 41.6
2070 Male, age 76, both hemispheres 54.1
2752 Female, age 85, both hemispheres 42.2
2341 Male, age 80, both hemispheres 40.5
2371 Male, age 61, both hemispheres 37.3
2135 Female, age 91, both hemispheres 34.1
Prepositus hypoglossal nucleus
nTPM: 37.2
2086 Male, age 80, both hemispheres 41.3
2855 Female, age 85, right hemisphere 33.2
Principal sensory trigeminal nucleus
nTPM: 33.6
2324 Male, age 76, both hemispheres 44.1
2158 Male, age 61, both hemispheres 31.0
2008 Male, age 80, left hemisphere 29.8
2367 Female, age 91, left hemisphere 29.4
Reticular pontine nucleus, caudal
nTPM: 32.3
2559 Male, age 74, both hemispheres 35.1
2332 Male, age 80, right hemisphere 33.8
2092 Male, age 76, both hemispheres 30.5
2457 Female, age 91, both hemispheres 29.8
Reticular pontine nucleus, oral
nTPM: 37.0
1939 Male, age 80, both hemispheres 47.6
2167 Male, age 76, both hemispheres 45.6
2012 Female, age 85, both hemispheres 32.5
2366 Female, age 91, both hemispheres 30.5
2361 Male, age 74, both hemispheres 28.6
Reticulotegmental nucleus
nTPM: 37.6
2333 Male, age 80, both hemispheres 40.0
2322 Female, age 91, both hemispheres 37.7
2452 Male, age 74, both hemispheres 37.0
2325 Male, age 76, both hemispheres 35.7
Spinal trigeminal nucleus, caudal
nTPM: 43.3
2642 Male, age 74, both hemispheres 51.6
2447 Male, age 76, both hemispheres 44.8
2390 Female, age 91, both hemispheres 42.2
2308 Male, age 80, both hemispheres 41.7
2312 Male, age 61, both hemispheres 36.0
Spinal trigeminal nucleus, interpolar
nTPM: 39.8
2066 Male, age 76, right hemisphere 45.5
2033 Male, age 80, both hemispheres 44.2
2625 Male, age 61, both hemispheres 40.4
2386 Female, age 85, both hemispheres 39.3
2389 Female, age 91, both hemispheres 29.4
Spinal trigeminal nucleus, oral
nTPM: 40.6
1978 Male, age 76, both hemispheres 42.3
2737 Female, age 85, both hemispheres 40.2
2164 Male, age 80, both hemispheres 39.3
Spinal vestibular nucleus
nTPM: 39.5
2748 Male, age 76, both hemispheres 46.5
2780 Male, age 80, both hemispheres 43.8
2796 Male, age 61, both hemispheres 39.1
2186 Female, age 91, both hemispheres 37.1
2384 Male, age 74, both hemispheres 36.5
2806 Female, age 85, both hemispheres 33.9
Subcoeruleus area
nTPM: 39.4
2323 Female, age 91, left hemisphere 51.9
2451 Male, age 74, both hemispheres 42.1
2369 Female, age 85, left hemisphere 36.6
1958 Male, age 80, both hemispheres 35.0
2089 Male, age 76, left hemisphere 31.3
Superior olive
nTPM: 28.2
2364 Male, age 74, right hemisphere 31.9
2329 Male, age 80, right hemisphere 29.6
1875 Female, age 85, both hemispheres 28.5
2561 Female, age 91, both hemispheres 27.1
2020 Male, age 76, both hemispheres 23.8
Superior vestibular nucleus
nTPM: 43.4
2061 Male, age 76, both hemispheres 52.0
2015 Male, age 80, both hemispheres 41.6
2383 Male, age 74, both hemispheres 36.7
Ventral medullary reticular nucleus
nTPM: 44.1
2060 Male, age 76, both hemispheres 50.0
2372 Male, age 61, both hemispheres 38.1
Ventral periolivary nuclei
nTPM: 29.3
2794 Female, age 91, left hemisphere 31.4
2165 Male, age 80, both hemispheres 29.6
2023 Male, age 76, both hemispheres 29.0
2130 Female, age 85, both hemispheres 27.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 39.7
1986 Male, age 76, both hemispheres 49.3
2741 Female, age 85, both hemispheres 38.7
2180 Male, age 61, both hemispheres 38.0
2118 Male, age 80, both hemispheres 37.6
2302 Female, age 91, both hemispheres 35.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 33.2
2359 Male, age 61, both hemispheres 45.1
2840 Female, age 85, both hemispheres 35.8
2456 Female, age 91, both hemispheres 31.3
2449 Male, age 74, both hemispheres 30.2
2161 Male, age 80, both hemispheres 28.7
1959 Male, age 76, both hemispheres 28.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 12.1
FF:10165-103B3 76 years, female 12.5
FF:10182-103D2 60 years, female 11.8
Medulla oblongata
Scaled Tags Per Million: 14.0
FF:10038-101F2 18-64 years, mixed 17.6
FF:10174-103C3 60 years, female 13.6
FF:10155-103A2 76 years, female 10.8
Pons
Scaled Tags Per Million: 12.7
FF:10033-101E6 18-54 years, mixed 12.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 26.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 26.5
Samples: 4

Max nTPM: 28.2
Min nTPM: 24.2
Sample A Female 27.7
Sample B Female 24.2
Sample C Male 28.2
Sample D Male 25.8
Pons
nTPM: 26.3
Samples: 4

Max nTPM: 29.8
Min nTPM: 24.0
Sample A Female 29.8
Sample B Female 24.1
Sample C Male 27.2
Sample D Male 24.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 37.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 37.3
Samples: 4

Max nTPM: 42.8
Min nTPM: 33.1
Sample A Male 39.0
Sample B Male 34.1
Sample C Female 42.8
Sample D Female 33.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.4
69549250 Antisense, RP_050125_02_C01, Mouse strain C57BL/6J (56 days, male) 2.4
Pons
Expression energy: 1.6
69549250 Antisense, RP_050125_02_C01, Mouse strain C57BL/6J (56 days, male) 1.6

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