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  • ADORA2A
BRAIN CAUDATE Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: High
Synapses: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:86.7 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:184.0 nTPM

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody CAB001943
Glial cells Not detected
Neuronal cells Medium
Neuronal projections High
Synapses High

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA075997
Glial cells Not detected
Neuronal cells Medium
Neuronal projections High
Synapses High

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA075997Antibody CAB001943
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 86.7
Samples: 246

Max nTPM: 227.1
Min nTPM: 3.7
Std nTPM: 47.5
Median nTPM: 79.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 227.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 212.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 207.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 206.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 191.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 190.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 187.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 186.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 185.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 183.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 180.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 179.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 178.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 177.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 176.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 174.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 173.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 172.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 169.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 167.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 164.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 164.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 163.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 163.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 161.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 160.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 159.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 154.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 151.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 147.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 146.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 144.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 144.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 142.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 140.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 140.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 140.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 139.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 138.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 137.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 136.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 135.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 134.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 134.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 133.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 130.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 126.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 126.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 124.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 123.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 122.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 121.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 121.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 120.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 118.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 117.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 117.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 115.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 114.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 114.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 113.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 113.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 112.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 112.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 111.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 111.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 110.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 110.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 110.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 109.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 109.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 108.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 108.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 108.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 107.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 106.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 106.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 105.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 104.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 104.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 104.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 104.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 103.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 102.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 101.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 101.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 100.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 100.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 100.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 98.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 98.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 98.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 98.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 97.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 95.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 95.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 94.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 94.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 90.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 90.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 90.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 90.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 88.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 88.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 88.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 88.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 86.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 84.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 84.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 84.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 84.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 82.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 82.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 82.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 82.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 81.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 81.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 81.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 80.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 80.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 79.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 79.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 79.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 79.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 79.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 78.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 78.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 77.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 77.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 76.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 76.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 76.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 76.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 75.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 74.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 73.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 72.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 72.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 71.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 71.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 71.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 70.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 70.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 69.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 68.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 67.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 67.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 66.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 66.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 66.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 65.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 65.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 65.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 65.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 64.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 64.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 63.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 63.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 63.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 62.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 61.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 61.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 61.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 61.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 60.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 60.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 60.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 60.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 60.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 58.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 57.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 57.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 57.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 56.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 56.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 55.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 55.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 54.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 53.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 53.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 53.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 52.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 50.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 47.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 47.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 46.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 45.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 45.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 44.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 44.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 43.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 43.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 43.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 42.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 41.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 39.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 38.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 37.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 37.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 37.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 37.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 35.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 35.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 34.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 34.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 33.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 33.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 32.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 31.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 31.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 31.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 31.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 31.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 30.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 30.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 30.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 30.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 30.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 29.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 29.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 29.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 29.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 27.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 26.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 25.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 23.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 23.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 22.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 21.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 21.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 20.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 20.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 17.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 16.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 15.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 13.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 13.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 13.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 5.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 3.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 32.1
FF:10164-103B2 76 years, female 32.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.0
Pig sample Sample description nTPM
Caudate
nTPM: 184.0
Samples: 4

Max nTPM: 251.7
Min nTPM: 114.7
Sample A Female 114.7
Sample B Female 194.5
Sample C Male 251.7
Sample D Male 175.0

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