PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:179.9 nTPM
FANTOM5:96.1 Scaled Tags Per Million
Pig:95.8 nTPM
Mouse:29.6 nTPM
Allen mouse:0.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 179.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 98.2
2301 Female, age 85, both hemispheres 114.1
2090 Male, age 80, both hemispheres 103.0
1984 Male, age 76, both hemispheres 89.5
2188 Female, age 91, both hemispheres 86.4
Area postrema
nTPM: 179.9
2799 Male, age 61, both hemispheres 303.5
2306 Male, age 80, both hemispheres 140.4
2054 Male, age 76, both hemispheres 95.9
Dorsal cochlear nucleus
nTPM: 107.1
2802 Male, age 74, right hemisphere 122.4
2378 Male, age 80, both hemispheres 120.8
2370 Male, age 61, both hemispheres 105.5
2187 Female, age 91, both hemispheres 100.9
2058 Male, age 76, both hemispheres 86.1
Dorsal medullary reticular nucleus
nTPM: 106.3
2373 Male, age 61, both hemispheres 129.6
2088 Male, age 76, both hemispheres 99.7
2040 Female, age 85, both hemispheres 89.5
Dorsal motor vagal complex
nTPM: 132.4
2797 Male, age 61, both hemispheres 231.4
2185 Male, age 76, both hemispheres 145.1
2844 Male, age 55, unknown 143.2
2643 Male, age 74, both hemispheres 136.5
2813 Female, age 72, unknown 112.4
2000 Male, age 74, unknown 105.0
2133 Female, age 91, both hemispheres 94.8
2807 Female, age 85, both hemispheres 90.6
Dorsal tegmental nucleus
nTPM: 100.9
2083 Male, age 80, both hemispheres 107.4
2326 Male, age 74, both hemispheres 101.8
1936 Male, age 76, left hemisphere 101.1
2358 Male, age 61, both hemispheres 93.2
Dorsolateral tegmental area
nTPM: 101.3
2337 Male, age 61, both hemispheres 115.4
2751 Female, age 85, both hemispheres 110.7
2654 Male, age 80, both hemispheres 107.2
2141 Male, age 76, both hemispheres 93.4
2360 Male, age 74, both hemispheres 79.6
Gigantocellular reticular nuclei, medullary
nTPM: 94.5
2314 Male, age 61, both hemispheres 162.5
1876 Female, age 85, both hemispheres 93.3
2387 Female, age 91, both hemispheres 86.1
2310 Male, age 80, both hemispheres 81.9
2462 Male, age 74, both hemispheres 75.1
2022 Male, age 76, right hemisphere 68.2
Gigantocellular reticular nuclei, pars
nTPM: 89.7
2336 Male, age 61, both hemispheres 104.6
2084 Female, age 85, both hemispheres 90.9
2330 Male, age 80, both hemispheres 88.2
2706 Male, age 80, both hemispheres 86.3
2168 Male, age 76, both hemispheres 78.5
Inferior olive
nTPM: 137.8
2178 Male, age 61, both hemispheres 161.4
2379 Male, age 80, both hemispheres 150.5
2085 Female, age 85, both hemispheres 135.4
2563 Male, age 74, both hemispheres 129.2
2628 Female, age 91, both hemispheres 112.4
Kolliker-Fuse nucleus
nTPM: 104.2
2315 Male, age 76, right hemisphere 141.5
2163 Male, age 80, both hemispheres 98.6
2793 Female, age 91, left hemisphere 72.5
Lateral lemniscal nuclei
nTPM: 74.4
2169 Male, age 76, both hemispheres 84.4
2746 Female, age 85, left hemisphere 81.1
2320 Female, age 91, left hemisphere 71.6
2036 Male, age 80, both hemispheres 70.1
2453 Male, age 74, right hemisphere 64.7
Lateral medullary reticular nucleus
nTPM: 125.6
2374 Male, age 61, both hemispheres 153.4
2852 Male, age 80, both hemispheres 146.9
2804 Female, age 91, both hemispheres 126.3
2190 Female, age 85, both hemispheres 125.2
2305 Male, age 74, both hemispheres 108.2
2044 Male, age 76, both hemispheres 93.7
Lateral parabrachial nucleus
nTPM: 98.6
2792 Male, age 76, both hemispheres 114.4
2139 Female, age 85, right hemisphere 103.9
2013 Male, age 80, both hemispheres 88.7
2790 Male, age 61, both hemispheres 87.5
Lateral vestibular nucleus
nTPM: 114.9
2311 Male, age 80, both hemispheres 122.0
2184 Male, age 76, both hemispheres 107.8
Locus coeruleus
nTPM: 94.6
2317 Female, age 72, unknown 113.1
2014 Male, age 55, unknown 102.2
2788 Male, age 74, unknown 98.5
2162 Male, age 80, both hemispheres 94.0
1980 Male, age 76, both hemispheres 88.2
2123 Female, age 91, both hemispheres 84.2
2720 Male, age 74, both hemispheres 81.9
Medial olivary nucleus
nTPM: 149.6
1962 Male, age 76, both hemispheres 189.5
1943 Male, age 61, both hemispheres 157.0
2138 Female, age 91, both hemispheres 132.4
2851 Male, age 80, both hemispheres 119.7
Medial parabrachial nucleus
nTPM: 103.1
2170 Female, age 91, both hemispheres 119.4
2786 Male, age 76, both hemispheres 107.3
2463 Female, age 85, right hemisphere 101.0
2854 Male, age 80, both hemispheres 100.2
2156 Male, age 61, both hemispheres 87.7
Medial periolivary nuclei
nTPM: 76.9
2081 Male, age 80, both hemispheres 92.4
2791 Male, age 74, right hemisphere 86.8
2063 Male, age 76, both hemispheres 76.5
2458 Female, age 91, both hemispheres 68.6
2171 Female, age 85, both hemispheres 60.1
Medial vestibular nucleus
nTPM: 97.2
2801 Male, age 74, both hemispheres 111.0
2624 Male, age 61, both hemispheres 105.4
2093 Male, age 80, both hemispheres 101.3
2743 Female, age 85, both hemispheres 94.6
2803 Female, age 91, both hemispheres 85.6
2134 Male, age 76, both hemispheres 85.5
Motor facial nucleus
nTPM: 80.3
2126 Male, age 61, both hemispheres 106.1
2795 Female, age 91, both hemispheres 91.5
2365 Male, age 74, right hemisphere 77.3
2062 Male, age 76, both hemispheres 74.2
2697 Female, age 85, both hemispheres 69.8
2327 Male, age 80, both hemispheres 62.7
Motor hypoglossal nucleus
nTPM: 102.5
2182 Male, age 80, both hemispheres 120.2
2461 Male, age 61, both hemispheres 111.9
2125 Female, age 91, both hemispheres 100.9
2277 Male, age 76, both hemispheres 97.7
2132 Female, age 85, both hemispheres 81.7
Motor trigeminal nucleus
nTPM: 83.3
2309 Male, age 76, both hemispheres 92.9
2335 Male, age 61, both hemispheres 90.9
2560 Male, age 74, both hemispheres 78.6
2321 Female, age 91, both hemispheres 77.3
2079 Male, age 80, both hemispheres 76.7
Nuclei of the trapezoid body
nTPM: 71.5
2166 Male, age 80, both hemispheres 83.4
2368 Female, age 91, both hemispheres 75.1
1983 Male, age 76, both hemispheres 74.1
2159 Male, age 61, both hemispheres 68.3
2735 Female, age 85, both hemispheres 56.6
Nucleus ambiguus
nTPM: 124.0
2071 Male, age 76, both hemispheres 156.8
2096 Female, age 85, both hemispheres 91.2
Nucleus cuneatus
nTPM: 124.9
2380 Male, age 80, both hemispheres 146.7
2564 Male, age 74, both hemispheres 142.5
2562 Male, age 61, both hemispheres 136.0
2805 Female, age 91, both hemispheres 131.8
2808 Female, age 85, both hemispheres 128.5
2100 Male, age 76, both hemispheres 119.6
2381 Male, age 80, both hemispheres 118.6
2376 Male, age 61, both hemispheres 109.1
2131 Male, age 76, both hemispheres 91.3
Nucleus gracilis
nTPM: 127.1
2299 Female, age 85, both hemispheres 134.6
2382 Male, age 80, both hemispheres 123.8
2627 Male, age 74, both hemispheres 123.0
Nucleus raphe magnus
nTPM: 68.8
2051 Male, age 76, both hemispheres 102.3
2328 Male, age 80, both hemispheres 80.2
2455 Male, age 74, both hemispheres 74.9
2459 Female, age 91, both hemispheres 59.0
2160 Male, age 61, both hemispheres 50.2
2172 Female, age 85, both hemispheres 46.0
Nucleus raphe obscurus
nTPM: 148.2
2142 Male, age 76, midline 201.0
2800 Male, age 61, midline 122.2
2845 Female, age 85, midline 121.4
Nucleus raphe pallidus
nTPM: 156.8
2145 Male, age 76, midline 184.3
1924 Male, age 61, midline 174.6
2183 Male, age 80, midline 111.5
Nucleus tractus solitarii
nTPM: 82.1
2307 Male, age 80, both hemispheres 86.3
2144 Female, age 91, right hemisphere 84.2
2191 Female, age 85, both hemispheres 81.0
2656 Male, age 76, both hemispheres 76.9
Paramedian reticular nucleus
nTPM: 92.9
2052 Male, age 76, both hemispheres 115.7
2057 Male, age 80, both hemispheres 102.6
2313 Male, age 61, both hemispheres 80.3
2050 Female, age 85, both hemispheres 72.8
Parvicellular reticular nuclei
nTPM: 94.5
2095 Male, age 76, both hemispheres 117.6
2119 Male, age 80, both hemispheres 105.5
2558 Male, age 74, both hemispheres 60.5
Parvicellular reticular nuclei, medullary
nTPM: 93.3
2181 Male, age 80, left hemisphere 96.9
2091 Female, age 85, both hemispheres 95.1
2189 Female, age 91, both hemispheres 87.7
Pedunculopontine tegmental nucleus
nTPM: 108.7
2338 Male, age 61, both hemispheres 123.0
1921 Female, age 85, both hemispheres 104.4
2334 Male, age 80, both hemispheres 98.7
Peritrigeminal nucleus
nTPM: 122.5
2067 Female, age 85, both hemispheres 132.4
2136 Male, age 76, both hemispheres 123.8
2179 Male, age 61, both hemispheres 111.3
Pontine nuclei
nTPM: 72.8
2115 Male, age 80, left hemisphere 86.5
2319 Female, age 91, both hemispheres 80.9
1863 Male, age 55, unknown 79.9
2109 Female, age 72, unknown 79.9
1968 Male, age 76, left hemisphere 75.6
2454 Male, age 74, left hemisphere 71.6
2727 Male, age 61, right hemisphere 56.2
2787 Female, age 85, both hemispheres 51.3
Pontine raphe nucleus
nTPM: 82.3
2853 Male, age 76, midline 99.0
2122 Female, age 85, midline 65.5
Posteroventral cochlear nucleus
nTPM: 100.8
2371 Male, age 61, both hemispheres 116.8
2341 Male, age 80, both hemispheres 111.4
2070 Male, age 76, both hemispheres 110.8
2135 Female, age 91, both hemispheres 89.8
2752 Female, age 85, both hemispheres 75.2
Prepositus hypoglossal nucleus
nTPM: 105.4
2855 Female, age 85, right hemisphere 116.3
2086 Male, age 80, both hemispheres 94.5
Principal sensory trigeminal nucleus
nTPM: 79.9
2324 Male, age 76, both hemispheres 109.1
2367 Female, age 91, left hemisphere 79.0
2008 Male, age 80, left hemisphere 66.4
2158 Male, age 61, both hemispheres 65.1
Reticular pontine nucleus, caudal
nTPM: 77.7
2092 Male, age 76, both hemispheres 95.9
2559 Male, age 74, both hemispheres 85.4
2457 Female, age 91, both hemispheres 66.3
2332 Male, age 80, right hemisphere 63.3
Reticular pontine nucleus, oral
nTPM: 86.3
2167 Male, age 76, both hemispheres 104.9
1939 Male, age 80, both hemispheres 98.1
2012 Female, age 85, both hemispheres 82.1
2366 Female, age 91, both hemispheres 76.1
2361 Male, age 74, both hemispheres 70.1
Reticulotegmental nucleus
nTPM: 87.7
2333 Male, age 80, both hemispheres 95.0
2322 Female, age 91, both hemispheres 89.1
2452 Male, age 74, both hemispheres 87.5
2325 Male, age 76, both hemispheres 79.2
Spinal trigeminal nucleus, caudal
nTPM: 103.0
2312 Male, age 61, both hemispheres 126.5
2308 Male, age 80, both hemispheres 115.0
2642 Male, age 74, both hemispheres 96.6
2447 Male, age 76, both hemispheres 90.5
2390 Female, age 91, both hemispheres 86.5
Spinal trigeminal nucleus, interpolar
nTPM: 82.6
2625 Male, age 61, both hemispheres 88.5
2033 Male, age 80, both hemispheres 87.5
2386 Female, age 85, both hemispheres 83.0
2389 Female, age 91, both hemispheres 79.6
2066 Male, age 76, right hemisphere 74.8
Spinal trigeminal nucleus, oral
nTPM: 87.1
2164 Male, age 80, both hemispheres 92.1
1978 Male, age 76, both hemispheres 91.6
2737 Female, age 85, both hemispheres 77.6
Spinal vestibular nucleus
nTPM: 93.9
2748 Male, age 76, both hemispheres 107.1
2806 Female, age 85, both hemispheres 97.6
2384 Male, age 74, both hemispheres 96.6
2780 Male, age 80, both hemispheres 89.7
2796 Male, age 61, both hemispheres 89.2
2186 Female, age 91, both hemispheres 83.2
Subcoeruleus area
nTPM: 96.3
2369 Female, age 85, left hemisphere 112.3
2451 Male, age 74, both hemispheres 101.6
2323 Female, age 91, left hemisphere 93.5
1958 Male, age 80, both hemispheres 90.1
2089 Male, age 76, left hemisphere 83.8
Superior olive
nTPM: 75.9
2364 Male, age 74, right hemisphere 88.1
2020 Male, age 76, both hemispheres 87.0
2329 Male, age 80, right hemisphere 85.3
2561 Female, age 91, both hemispheres 60.9
1875 Female, age 85, both hemispheres 58.4
Superior vestibular nucleus
nTPM: 103.1
2061 Male, age 76, both hemispheres 106.8
2015 Male, age 80, both hemispheres 106.7
2383 Male, age 74, both hemispheres 95.9
Ventral medullary reticular nucleus
nTPM: 116.1
2372 Male, age 61, both hemispheres 140.8
2060 Male, age 76, both hemispheres 91.5
Ventral periolivary nuclei
nTPM: 79.0
2023 Male, age 76, both hemispheres 104.8
2130 Female, age 85, both hemispheres 78.8
2165 Male, age 80, both hemispheres 75.8
2794 Female, age 91, left hemisphere 56.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 110.7
2180 Male, age 61, both hemispheres 121.9
2118 Male, age 80, both hemispheres 111.2
1986 Male, age 76, both hemispheres 111.0
2302 Female, age 91, both hemispheres 110.3
2741 Female, age 85, both hemispheres 99.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 86.0
2359 Male, age 61, both hemispheres 113.8
2161 Male, age 80, both hemispheres 88.1
1959 Male, age 76, both hemispheres 83.5
2840 Female, age 85, both hemispheres 80.3
2456 Female, age 91, both hemispheres 77.8
2449 Male, age 74, both hemispheres 72.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 96.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 86.2
FF:10165-103B3 76 years, female 95.0
FF:10182-103D2 60 years, female 77.4
Medulla oblongata
Scaled Tags Per Million: 96.1
FF:10038-101F2 18-64 years, mixed 158.0
FF:10155-103A2 76 years, female 70.7
FF:10174-103C3 60 years, female 59.6
Pons
Scaled Tags Per Million: 75.8
FF:10033-101E6 18-54 years, mixed 75.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 95.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 95.8
Samples: 4

Max nTPM: 114.1
Min nTPM: 74.1
Sample A Female 82.3
Sample B Female 74.1
Sample C Male 114.1
Sample D Male 112.6
Pons
nTPM: 78.9
Samples: 4

Max nTPM: 89.7
Min nTPM: 66.3
Sample A Female 86.2
Sample B Female 66.3
Sample C Male 73.2
Sample D Male 89.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 29.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 29.6
Samples: 4

Max nTPM: 30.6
Min nTPM: 28.6
Sample A Male 30.1
Sample B Male 29.0
Sample C Female 28.6
Sample D Female 30.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.6
79756317 Antisense, RP_071204_02_E06, Mouse strain C57BL/6J (56 days, male) 0.6
Pons
Expression energy: 0.4
79756317 Antisense, RP_071204_02_E06, Mouse strain C57BL/6J (56 days, male) 0.4

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