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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:78.8 nTPM
FANTOM5:27.0 Scaled Tags Per Million
Pig:30.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB011201
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 78.8
Samples: 246

Max nTPM: 183.2
Min nTPM: 19.9
Std nTPM: 35.2
Median nTPM: 76.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 183.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 176.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 174.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 174.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 173.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 173.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 163.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 163.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 160.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 153.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 148.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 148.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 146.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 142.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 142.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 138.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 135.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 135.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 133.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 133.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 133.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 131.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 131.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 127.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 125.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 121.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 120.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 119.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 118.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 117.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 117.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 117.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 115.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 115.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 114.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 112.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 112.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 112.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 112.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 111.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 111.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 110.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 110.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 109.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 109.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 108.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 107.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 106.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 105.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 105.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 105.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 104.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 104.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 104.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 103.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 103.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 103.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 101.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 101.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 101.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 100.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 100.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 100.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 100.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 99.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 99.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 98.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 97.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 97.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 95.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 95.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 94.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 94.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 94.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 94.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 93.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 93.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 93.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 92.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 92.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 92.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 91.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 91.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 90.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 90.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 89.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 89.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 89.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 89.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 89.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 89.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 87.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 86.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 86.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 86.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 86.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 85.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 85.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 85.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 85.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 85.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 84.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 84.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 83.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 83.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 82.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 82.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 82.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 81.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 80.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 80.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 79.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 79.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 78.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 78.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 78.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 78.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 77.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 77.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 77.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 77.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 77.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 76.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 76.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 76.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 76.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 75.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 75.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 75.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 74.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 74.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 73.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 73.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 71.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 71.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 70.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 70.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 69.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 69.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 69.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 69.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 68.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 68.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 67.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 67.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 67.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 67.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 66.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 66.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 65.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 64.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 64.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 64.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 64.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 63.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 63.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 63.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 63.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 63.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 62.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 62.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 60.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 58.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 58.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 58.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 58.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 57.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 56.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 55.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 55.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 55.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 55.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 55.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 54.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 53.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 53.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 52.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 52.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 51.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 50.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 49.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 49.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 48.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 47.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 47.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 47.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 46.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 45.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 45.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 45.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 44.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 43.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 43.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 42.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 42.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 41.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 41.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 41.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 41.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 41.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 40.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 40.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 40.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 40.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 40.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 40.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 40.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 40.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 39.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 39.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 39.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 39.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 38.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 38.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 37.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 37.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 37.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 36.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 35.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 35.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 35.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 34.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 34.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 34.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 33.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 33.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 31.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 31.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 31.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 30.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 30.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 30.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 29.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 27.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 24.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 23.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 22.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 21.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 20.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 19.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

27.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 27.0
FF:10164-103B2 76 years, female 27.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.4
Pig sample Sample description nTPM
Caudate
nTPM: 30.4
Samples: 4

Max nTPM: 37.3
Min nTPM: 23.3
Sample A Female 23.3
Sample B Female 32.9
Sample C Male 37.3
Sample D Male 28.1

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