PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:129.8 nTPM
FANTOM5:58.0 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:11.4 nTPM
Allen mouse:0.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 129.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 93.4
2301 Female, age 85, both hemispheres 147.0
2188 Female, age 91, both hemispheres 116.2
2090 Male, age 80, both hemispheres 64.0
1984 Male, age 76, both hemispheres 46.2
Area postrema
nTPM: 41.2
2306 Male, age 80, both hemispheres 75.7
2054 Male, age 76, both hemispheres 25.5
2799 Male, age 61, both hemispheres 22.5
Dorsal cochlear nucleus
nTPM: 58.4
2187 Female, age 91, both hemispheres 109.2
2378 Male, age 80, both hemispheres 56.5
2802 Male, age 74, right hemisphere 49.5
2370 Male, age 61, both hemispheres 43.1
2058 Male, age 76, both hemispheres 33.8
Dorsal medullary reticular nucleus
nTPM: 71.0
2373 Male, age 61, both hemispheres 75.7
2040 Female, age 85, both hemispheres 71.8
2088 Male, age 76, both hemispheres 65.6
Dorsal motor vagal complex
nTPM: 36.4
2185 Male, age 76, both hemispheres 81.5
2000 Male, age 74, unknown 45.7
2133 Female, age 91, both hemispheres 39.9
2844 Male, age 55, unknown 31.0
2807 Female, age 85, both hemispheres 28.1
2797 Male, age 61, both hemispheres 22.3
2643 Male, age 74, both hemispheres 22.1
2813 Female, age 72, unknown 20.8
Dorsal tegmental nucleus
nTPM: 56.5
2083 Male, age 80, both hemispheres 89.5
2326 Male, age 74, both hemispheres 66.8
1936 Male, age 76, left hemisphere 50.4
2358 Male, age 61, both hemispheres 19.3
Dorsolateral tegmental area
nTPM: 74.7
2751 Female, age 85, both hemispheres 133.2
2654 Male, age 80, both hemispheres 93.7
2337 Male, age 61, both hemispheres 78.2
2360 Male, age 74, both hemispheres 40.0
2141 Male, age 76, both hemispheres 28.3
Gigantocellular reticular nuclei, medullary
nTPM: 88.2
2314 Male, age 61, both hemispheres 200.5
1876 Female, age 85, both hemispheres 88.3
2310 Male, age 80, both hemispheres 78.4
2387 Female, age 91, both hemispheres 76.1
2462 Male, age 74, both hemispheres 44.9
2022 Male, age 76, right hemisphere 40.8
Gigantocellular reticular nuclei, pars
nTPM: 67.3
2336 Male, age 61, both hemispheres 88.7
2084 Female, age 85, both hemispheres 68.6
2330 Male, age 80, both hemispheres 64.9
2706 Male, age 80, both hemispheres 60.8
2168 Male, age 76, both hemispheres 53.8
Inferior olive
nTPM: 93.6
2178 Male, age 61, both hemispheres 155.5
2085 Female, age 85, both hemispheres 90.6
2563 Male, age 74, both hemispheres 87.5
2628 Female, age 91, both hemispheres 74.3
2379 Male, age 80, both hemispheres 60.2
Kolliker-Fuse nucleus
nTPM: 74.9
2793 Female, age 91, left hemisphere 109.9
2163 Male, age 80, both hemispheres 63.9
2315 Male, age 76, right hemisphere 50.8
Lateral lemniscal nuclei
nTPM: 82.3
2746 Female, age 85, left hemisphere 111.6
2320 Female, age 91, left hemisphere 106.4
2453 Male, age 74, right hemisphere 77.1
2036 Male, age 80, both hemispheres 62.1
2169 Male, age 76, both hemispheres 54.4
Lateral medullary reticular nucleus
nTPM: 92.5
2305 Male, age 74, both hemispheres 142.0
2852 Male, age 80, both hemispheres 108.6
2374 Male, age 61, both hemispheres 95.4
2190 Female, age 85, both hemispheres 82.1
2804 Female, age 91, both hemispheres 65.4
2044 Male, age 76, both hemispheres 61.5
Lateral parabrachial nucleus
nTPM: 54.8
2792 Male, age 76, both hemispheres 81.6
2013 Male, age 80, both hemispheres 71.0
2139 Female, age 85, right hemisphere 51.7
2790 Male, age 61, both hemispheres 14.8
Lateral vestibular nucleus
nTPM: 69.9
2311 Male, age 80, both hemispheres 83.2
2184 Male, age 76, both hemispheres 56.6
Locus coeruleus
nTPM: 27.4
2162 Male, age 80, both hemispheres 37.6
2123 Female, age 91, both hemispheres 34.6
2317 Female, age 72, unknown 33.3
2720 Male, age 74, both hemispheres 27.9
2014 Male, age 55, unknown 27.1
1980 Male, age 76, both hemispheres 18.9
2788 Male, age 74, unknown 12.4
Medial olivary nucleus
nTPM: 108.8
1943 Male, age 61, both hemispheres 171.1
1962 Male, age 76, both hemispheres 135.1
2851 Male, age 80, both hemispheres 66.9
2138 Female, age 91, both hemispheres 62.1
Medial parabrachial nucleus
nTPM: 87.1
2170 Female, age 91, both hemispheres 141.9
2463 Female, age 85, right hemisphere 132.3
2854 Male, age 80, both hemispheres 68.3
2786 Male, age 76, both hemispheres 63.4
2156 Male, age 61, both hemispheres 29.5
Medial periolivary nuclei
nTPM: 72.1
2081 Male, age 80, both hemispheres 101.0
2458 Female, age 91, both hemispheres 83.4
2791 Male, age 74, right hemisphere 69.4
2063 Male, age 76, both hemispheres 53.2
2171 Female, age 85, both hemispheres 53.2
Medial vestibular nucleus
nTPM: 64.9
2801 Male, age 74, both hemispheres 94.5
2624 Male, age 61, both hemispheres 81.7
2093 Male, age 80, both hemispheres 76.1
2803 Female, age 91, both hemispheres 61.9
2743 Female, age 85, both hemispheres 52.2
2134 Male, age 76, both hemispheres 23.3
Motor facial nucleus
nTPM: 71.9
2126 Male, age 61, both hemispheres 131.6
2365 Male, age 74, right hemisphere 80.6
2697 Female, age 85, both hemispheres 67.5
2327 Male, age 80, both hemispheres 52.0
2795 Female, age 91, both hemispheres 51.6
2062 Male, age 76, both hemispheres 47.7
Motor hypoglossal nucleus
nTPM: 66.6
2125 Female, age 91, both hemispheres 100.0
2182 Male, age 80, both hemispheres 97.3
2132 Female, age 85, both hemispheres 83.1
2461 Male, age 61, both hemispheres 27.4
2277 Male, age 76, both hemispheres 25.4
Motor trigeminal nucleus
nTPM: 80.1
2321 Female, age 91, both hemispheres 110.2
2560 Male, age 74, both hemispheres 103.9
2335 Male, age 61, both hemispheres 64.2
2079 Male, age 80, both hemispheres 62.6
2309 Male, age 76, both hemispheres 59.8
Nuclei of the trapezoid body
nTPM: 70.2
2166 Male, age 80, both hemispheres 87.4
2159 Male, age 61, both hemispheres 81.2
2368 Female, age 91, both hemispheres 80.3
1983 Male, age 76, both hemispheres 55.0
2735 Female, age 85, both hemispheres 47.2
Nucleus ambiguus
nTPM: 100.9
2071 Male, age 76, both hemispheres 131.7
2096 Female, age 85, both hemispheres 70.1
Nucleus cuneatus
nTPM: 71.2
2376 Male, age 61, both hemispheres 104.9
2100 Male, age 76, both hemispheres 95.8
2380 Male, age 80, both hemispheres 82.4
2808 Female, age 85, both hemispheres 78.3
2564 Male, age 74, both hemispheres 68.5
2131 Male, age 76, both hemispheres 67.4
2381 Male, age 80, both hemispheres 65.4
2805 Female, age 91, both hemispheres 40.0
2562 Male, age 61, both hemispheres 37.9
Nucleus gracilis
nTPM: 72.4
2382 Male, age 80, both hemispheres 87.5
2299 Female, age 85, both hemispheres 65.9
2627 Male, age 74, both hemispheres 63.7
Nucleus raphe magnus
nTPM: 66.7
2459 Female, age 91, both hemispheres 93.2
2051 Male, age 76, both hemispheres 84.3
2328 Male, age 80, both hemispheres 71.9
2455 Male, age 74, both hemispheres 63.9
2160 Male, age 61, both hemispheres 47.4
2172 Female, age 85, both hemispheres 39.4
Nucleus raphe obscurus
nTPM: 129.8
2142 Male, age 76, midline 135.4
2845 Female, age 85, midline 131.8
2800 Male, age 61, midline 122.3
Nucleus raphe pallidus
nTPM: 116.8
2145 Male, age 76, midline 147.2
1924 Male, age 61, midline 126.8
2183 Male, age 80, midline 76.2
Nucleus tractus solitarii
nTPM: 19.6
2656 Male, age 76, both hemispheres 23.5
2191 Female, age 85, both hemispheres 21.6
2307 Male, age 80, both hemispheres 19.5
2144 Female, age 91, right hemisphere 13.7
Paramedian reticular nucleus
nTPM: 63.7
2050 Female, age 85, both hemispheres 76.3
2057 Male, age 80, both hemispheres 72.5
2313 Male, age 61, both hemispheres 58.5
2052 Male, age 76, both hemispheres 47.4
Parvicellular reticular nuclei
nTPM: 81.5
2095 Male, age 76, both hemispheres 90.2
2119 Male, age 80, both hemispheres 83.7
2558 Male, age 74, both hemispheres 70.5
Parvicellular reticular nuclei, medullary
nTPM: 54.2
2189 Female, age 91, both hemispheres 68.3
2091 Female, age 85, both hemispheres 55.5
2181 Male, age 80, left hemisphere 38.7
Pedunculopontine tegmental nucleus
nTPM: 46.4
2334 Male, age 80, both hemispheres 59.5
1921 Female, age 85, both hemispheres 44.9
2338 Male, age 61, both hemispheres 34.8
Peritrigeminal nucleus
nTPM: 84.3
2179 Male, age 61, both hemispheres 90.9
2067 Female, age 85, both hemispheres 83.8
2136 Male, age 76, both hemispheres 78.2
Pontine nuclei
nTPM: 99.2
2454 Male, age 74, left hemisphere 138.1
2109 Female, age 72, unknown 122.4
2319 Female, age 91, both hemispheres 114.2
2115 Male, age 80, left hemisphere 99.5
2727 Male, age 61, right hemisphere 91.5
1968 Male, age 76, left hemisphere 85.9
1863 Male, age 55, unknown 74.6
2787 Female, age 85, both hemispheres 67.7
Pontine raphe nucleus
nTPM: 40.6
2122 Female, age 85, midline 43.3
2853 Male, age 76, midline 37.8
Posteroventral cochlear nucleus
nTPM: 79.7
2135 Female, age 91, both hemispheres 121.0
2341 Male, age 80, both hemispheres 88.6
2070 Male, age 76, both hemispheres 84.0
2752 Female, age 85, both hemispheres 55.4
2371 Male, age 61, both hemispheres 49.6
Prepositus hypoglossal nucleus
nTPM: 58.2
2855 Female, age 85, right hemisphere 82.3
2086 Male, age 80, both hemispheres 34.2
Principal sensory trigeminal nucleus
nTPM: 67.8
2367 Female, age 91, left hemisphere 104.8
2008 Male, age 80, left hemisphere 59.6
2158 Male, age 61, both hemispheres 53.5
2324 Male, age 76, both hemispheres 53.4
Reticular pontine nucleus, caudal
nTPM: 89.7
2559 Male, age 74, both hemispheres 120.1
2457 Female, age 91, both hemispheres 98.6
2092 Male, age 76, both hemispheres 74.3
2332 Male, age 80, right hemisphere 65.8
Reticular pontine nucleus, oral
nTPM: 87.7
2361 Male, age 74, both hemispheres 128.3
2012 Female, age 85, both hemispheres 87.3
2366 Female, age 91, both hemispheres 87.3
1939 Male, age 80, both hemispheres 72.2
2167 Male, age 76, both hemispheres 63.4
Reticulotegmental nucleus
nTPM: 69.3
2322 Female, age 91, both hemispheres 87.5
2452 Male, age 74, both hemispheres 77.9
2333 Male, age 80, both hemispheres 76.9
2325 Male, age 76, both hemispheres 34.8
Spinal trigeminal nucleus, caudal
nTPM: 80.3
2312 Male, age 61, both hemispheres 144.0
2447 Male, age 76, both hemispheres 88.1
2308 Male, age 80, both hemispheres 71.1
2390 Female, age 91, both hemispheres 57.8
2642 Male, age 74, both hemispheres 40.4
Spinal trigeminal nucleus, interpolar
nTPM: 44.4
2389 Female, age 91, both hemispheres 57.4
2033 Male, age 80, both hemispheres 55.7
2386 Female, age 85, both hemispheres 48.1
2066 Male, age 76, right hemisphere 32.6
2625 Male, age 61, both hemispheres 28.4
Spinal trigeminal nucleus, oral
nTPM: 64.0
2164 Male, age 80, both hemispheres 73.5
2737 Female, age 85, both hemispheres 60.7
1978 Male, age 76, both hemispheres 57.9
Spinal vestibular nucleus
nTPM: 67.2
2748 Male, age 76, both hemispheres 93.6
2384 Male, age 74, both hemispheres 69.7
2186 Female, age 91, both hemispheres 66.8
2806 Female, age 85, both hemispheres 66.2
2780 Male, age 80, both hemispheres 60.7
2796 Male, age 61, both hemispheres 46.5
Subcoeruleus area
nTPM: 67.0
2369 Female, age 85, left hemisphere 136.4
1958 Male, age 80, both hemispheres 61.4
2089 Male, age 76, left hemisphere 61.3
2451 Male, age 74, both hemispheres 39.5
2323 Female, age 91, left hemisphere 36.5
Superior olive
nTPM: 83.2
2329 Male, age 80, right hemisphere 92.0
2364 Male, age 74, right hemisphere 91.4
2020 Male, age 76, both hemispheres 86.8
2561 Female, age 91, both hemispheres 84.9
1875 Female, age 85, both hemispheres 60.8
Superior vestibular nucleus
nTPM: 55.5
2015 Male, age 80, both hemispheres 68.0
2061 Male, age 76, both hemispheres 61.7
2383 Male, age 74, both hemispheres 36.7
Ventral medullary reticular nucleus
nTPM: 88.8
2372 Male, age 61, both hemispheres 98.4
2060 Male, age 76, both hemispheres 79.2
Ventral periolivary nuclei
nTPM: 56.6
2023 Male, age 76, both hemispheres 89.4
2165 Male, age 80, both hemispheres 60.7
2794 Female, age 91, left hemisphere 52.5
2130 Female, age 85, both hemispheres 23.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 85.3
2180 Male, age 61, both hemispheres 121.6
2118 Male, age 80, both hemispheres 90.9
2302 Female, age 91, both hemispheres 73.4
1986 Male, age 76, both hemispheres 71.7
2741 Female, age 85, both hemispheres 68.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 71.3
2456 Female, age 91, both hemispheres 90.8
2840 Female, age 85, both hemispheres 83.6
2449 Male, age 74, both hemispheres 83.4
2161 Male, age 80, both hemispheres 77.7
1959 Male, age 76, both hemispheres 60.9
2359 Male, age 61, both hemispheres 31.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 58.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 58.0
FF:10182-103D2 60 years, female 58.4
FF:10165-103B3 76 years, female 57.7
Medulla oblongata
Scaled Tags Per Million: 46.6
FF:10155-103A2 76 years, female 57.5
FF:10038-101F2 18-64 years, mixed 42.9
FF:10174-103C3 60 years, female 39.5
Pons
Scaled Tags Per Million: 30.1
FF:10033-101E6 18-54 years, mixed 30.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 17.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 17.4
Samples: 4

Max nTPM: 21.5
Min nTPM: 9.5
Sample A Female 19.7
Sample B Female 9.5
Sample C Male 18.7
Sample D Male 21.5
Pons
nTPM: 9.0
Samples: 4

Max nTPM: 13.8
Min nTPM: 7.0
Sample A Female 8.2
Sample B Female 7.0
Sample C Male 7.1
Sample D Male 13.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 11.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 11.4
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.4
Sample A Male 10.8
Sample B Male 10.4
Sample C Female 12.5
Sample D Female 11.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.6
75198136 Antisense, RP_060502_02_A07, Mouse strain C57BL/6J (56 days, male) 0.6
Pons
Expression energy: 0.4
75198136 Antisense, RP_060502_02_A07, Mouse strain C57BL/6J (56 days, male) 0.4

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