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CAP1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:102.7 nTPM
FANTOM5:108.6 Scaled Tags Per Million
Pig:116.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030124
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 102.7
Samples: 246

Max nTPM: 267.7
Min nTPM: 67.7
Std nTPM: 28.9
Median nTPM: 95.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 267.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 248.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 221.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 194.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 193.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 191.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 182.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 179.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 169.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 166.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 160.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 159.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 158.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 158.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 154.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 151.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 150.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 148.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 143.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 139.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 137.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 136.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 136.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 135.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 134.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 134.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 134.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 132.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 131.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 130.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 128.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 127.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 127.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 126.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 125.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 124.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 123.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 123.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 123.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 122.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 122.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 122.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 121.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 121.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 120.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 118.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 118.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 118.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 117.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 117.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 116.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 116.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 115.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 115.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 115.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 114.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 114.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 114.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 113.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 112.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 112.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 112.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 111.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 110.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 110.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 110.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 110.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 109.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 108.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 108.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 108.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 108.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 108.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 107.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 107.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 106.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 106.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 106.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 106.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 105.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 104.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 104.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 103.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 103.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 102.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 102.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 102.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 102.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 102.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 102.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 102.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 101.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 101.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 101.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 101.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 101.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 100.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 100.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 100.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 99.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 99.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 99.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 99.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 98.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 98.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 98.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 97.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 97.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 97.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 97.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 97.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 97.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 97.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 97.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 97.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 96.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 96.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 96.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 96.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 96.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 96.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 95.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 95.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 95.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 94.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 94.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 94.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 94.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 94.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 94.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 93.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 93.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 93.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 92.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 92.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 92.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 92.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 92.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 92.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 92.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 92.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 92.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 91.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 90.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 90.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 90.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 90.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 90.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 90.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 90.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 89.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 89.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 89.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 89.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 89.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 89.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 88.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 88.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 88.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 88.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 88.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 88.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 88.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 88.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 87.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 87.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 87.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 86.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 86.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 86.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 86.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 86.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 86.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 86.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 86.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 86.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 85.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 85.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 85.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 85.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 85.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 85.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 84.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 84.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 84.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 84.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 84.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 84.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 83.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 83.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 83.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 82.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 82.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 82.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 82.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 82.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 81.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 81.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 81.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 81.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 80.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 80.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 80.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 80.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 80.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 79.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 79.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 79.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 79.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 79.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 78.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 78.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 78.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 78.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 77.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 77.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 76.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 76.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 75.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 75.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 75.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 75.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 74.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 74.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 74.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 74.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 74.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 73.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 72.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 72.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 72.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 72.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 72.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 72.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 71.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 71.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 71.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 70.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 70.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 70.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 69.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 68.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 68.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 67.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

108.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 108.6
FF:10164-103B2 76 years, female 108.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.2
Pig sample Sample description nTPM
Caudate
nTPM: 116.2
Samples: 4

Max nTPM: 140.9
Min nTPM: 92.3
Sample A Female 92.3
Sample B Female 117.1
Sample C Male 140.9
Sample D Male 114.6

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