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WBP2
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  • WBP2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:249.7 nTPM
FANTOM5:506.9 Scaled Tags Per Million
Pig:300.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA065682
Glial cells Not detected
Neuronal cells Medium

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

249.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 249.7
Samples: 246

Max nTPM: 390.1
Min nTPM: 146.7
Std nTPM: 44.5
Median nTPM: 252.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 390.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 376.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 370.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 368.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 360.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 351.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 348.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 346.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 344.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 338.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 337.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 337.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 335.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 326.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 326.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 326.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 322.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 319.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 312.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 308.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 305.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 305.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 302.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 301.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 301.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 300.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 299.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 299.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 298.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 297.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 296.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 296.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 294.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 293.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 293.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 291.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 291.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 291.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 290.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 289.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 288.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 288.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 288.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 288.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 288.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 287.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 286.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 286.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 284.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 282.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 282.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 281.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 280.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 280.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 280.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 279.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 278.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 277.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 277.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 276.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 275.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 275.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 275.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 274.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 274.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 274.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 274.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 274.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 273.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 272.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 272.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 270.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 269.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 269.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 269.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 268.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 268.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 268.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 267.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 266.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 266.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 265.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 265.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 265.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 265.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 264.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 264.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 264.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 264.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 263.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 263.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 262.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 261.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 261.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 261.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 261.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 260.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 260.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 260.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 260.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 260.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 259.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 258.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 257.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 257.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 257.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 256.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 256.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 256.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 255.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 255.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 255.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 254.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 254.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 254.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 254.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 254.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 254.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 253.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 253.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 253.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 253.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 252.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 252.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 250.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 250.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 250.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 249.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 248.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 247.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 246.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 246.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 246.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 246.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 246.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 245.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 244.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 244.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 244.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 243.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 243.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 241.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 241.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 241.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 240.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 239.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 239.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 238.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 237.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 236.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 236.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 235.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 235.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 235.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 234.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 232.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 232.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 232.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 231.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 229.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 228.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 228.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 228.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 228.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 228.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 227.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 226.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 226.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 226.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 225.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 225.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 225.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 224.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 224.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 223.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 223.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 223.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 222.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 221.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 220.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 219.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 218.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 217.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 217.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 217.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 216.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 212.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 212.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 212.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 211.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 211.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 210.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 210.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 210.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 210.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 210.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 210.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 209.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 208.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 208.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 207.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 207.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 206.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 206.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 206.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 205.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 205.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 205.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 204.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 204.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 203.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 203.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 202.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 202.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 202.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 201.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 201.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 200.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 198.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 197.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 197.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 196.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 196.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 194.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 193.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 185.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 184.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 182.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 181.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 180.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 179.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 177.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 177.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 177.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 177.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 177.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 175.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 174.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 174.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 173.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 169.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 169.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 168.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 166.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 147.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 146.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

506.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 506.9
FF:10164-103B2 76 years, female 506.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

300.2
Pig sample Sample description nTPM
Caudate
nTPM: 300.2
Samples: 4

Max nTPM: 324.1
Min nTPM: 254.2
Sample A Female 254.2
Sample B Female 312.3
Sample C Male 324.1
Sample D Male 310.2

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