We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
DLG4
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • DLG4
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:154.9 nTPM
FANTOM5:959.8 Scaled Tags Per Million
Pig:281.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010122Antibody HPA071006Antibody CAB001999Antibody CAB002000
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells HighHighMediumNot detected








CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 154.9
Samples: 246

Max nTPM: 346.8
Min nTPM: 17.5
Std nTPM: 82.9
Median nTPM: 154.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 346.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 340.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 338.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 334.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 328.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 327.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 325.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 320.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 310.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 309.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 309.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 303.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 301.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 298.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 295.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 294.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 291.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 290.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 290.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 284.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 283.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 278.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 277.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 275.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 274.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 273.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 272.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 270.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 264.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 261.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 258.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 258.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 252.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 252.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 251.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 251.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 242.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 241.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 239.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 236.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 234.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 234.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 233.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 233.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 231.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 230.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 229.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 227.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 227.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 226.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 226.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 226.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 225.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 224.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 223.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 223.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 220.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 217.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 216.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 215.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 215.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 214.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 213.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 212.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 211.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 211.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 210.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 209.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 209.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 208.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 208.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 208.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 207.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 206.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 206.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 205.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 204.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 199.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 199.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 198.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 197.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 196.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 196.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 196.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 195.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 191.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 191.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 187.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 185.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 184.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 184.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 183.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 181.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 181.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 180.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 179.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 179.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 179.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 178.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 178.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 177.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 176.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 173.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 173.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 170.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 168.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 167.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 166.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 165.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 165.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 165.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 164.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 163.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 163.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 162.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 162.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 161.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 160.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 160.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 160.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 156.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 156.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 156.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 153.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 152.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 149.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 145.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 144.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 143.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 143.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 143.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 142.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 142.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 140.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 139.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 137.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 136.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 136.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 135.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 135.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 135.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 134.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 132.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 132.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 131.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 129.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 128.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 126.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 126.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 121.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 119.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 119.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 119.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 118.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 117.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 117.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 117.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 116.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 116.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 113.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 113.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 113.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 110.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 109.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 108.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 107.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 106.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 102.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 101.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 99.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 94.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 90.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 89.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 89.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 89.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 89.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 89.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 88.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 88.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 88.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 87.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 86.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 83.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 78.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 76.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 73.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 72.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 71.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 71.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 71.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 67.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 67.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 67.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 65.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 65.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 63.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 61.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 60.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 57.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 57.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 56.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 56.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 55.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 54.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 53.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 52.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 51.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 50.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 50.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 49.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 49.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 48.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 47.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 46.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 46.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 44.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 44.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 44.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 42.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 41.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 41.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 40.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 40.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 39.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 39.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 35.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 34.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 34.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 34.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 31.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 28.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 27.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 22.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 21.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 17.5
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

959.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 959.8
FF:10164-103B2 76 years, female 959.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

281.9
Pig sample Sample description nTPM
Caudate
nTPM: 281.9
Samples: 4

Max nTPM: 347.3
Min nTPM: 215.2
Sample A Female 215.2
Sample B Female 296.7
Sample C Male 347.3
Sample D Male 268.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org