PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:24.6 nTPM
FANTOM5:127.4 Scaled Tags Per Million
Pig:37.0 nTPM
Mouse:15.6 nTPM
Allen mouse:5.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 24.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 12.9
2188 Female, age 91, both hemispheres 16.9
2090 Male, age 80, both hemispheres 12.1
1984 Male, age 76, both hemispheres 12.0
2301 Female, age 85, both hemispheres 10.7
Area postrema
nTPM: 16.9
2799 Male, age 61, both hemispheres 18.4
2054 Male, age 76, both hemispheres 16.7
2306 Male, age 80, both hemispheres 15.7
Dorsal cochlear nucleus
nTPM: 18.5
2802 Male, age 74, right hemisphere 21.4
2370 Male, age 61, both hemispheres 19.5
2378 Male, age 80, both hemispheres 17.5
2187 Female, age 91, both hemispheres 17.3
2058 Male, age 76, both hemispheres 16.6
Dorsal medullary reticular nucleus
nTPM: 15.5
2040 Female, age 85, both hemispheres 26.7
2088 Male, age 76, both hemispheres 11.7
2373 Male, age 61, both hemispheres 8.2
Dorsal motor vagal complex
nTPM: 15.5
2000 Male, age 74, unknown 21.4
2133 Female, age 91, both hemispheres 20.0
2643 Male, age 74, both hemispheres 16.9
2813 Female, age 72, unknown 15.9
2844 Male, age 55, unknown 14.9
2797 Male, age 61, both hemispheres 12.4
2185 Male, age 76, both hemispheres 11.6
2807 Female, age 85, both hemispheres 11.1
Dorsal tegmental nucleus
nTPM: 17.6
2083 Male, age 80, both hemispheres 22.4
2326 Male, age 74, both hemispheres 16.8
2358 Male, age 61, both hemispheres 16.3
1936 Male, age 76, left hemisphere 15.1
Dorsolateral tegmental area
nTPM: 18.6
2654 Male, age 80, both hemispheres 26.7
2751 Female, age 85, both hemispheres 21.7
2360 Male, age 74, both hemispheres 18.5
2337 Male, age 61, both hemispheres 13.1
2141 Male, age 76, both hemispheres 13.0
Gigantocellular reticular nuclei, medullary
nTPM: 17.3
1876 Female, age 85, both hemispheres 25.5
2022 Male, age 76, right hemisphere 19.7
2387 Female, age 91, both hemispheres 18.6
2314 Male, age 61, both hemispheres 18.5
2462 Male, age 74, both hemispheres 12.3
2310 Male, age 80, both hemispheres 8.9
Gigantocellular reticular nuclei, pars
nTPM: 12.5
2084 Female, age 85, both hemispheres 19.7
2168 Male, age 76, both hemispheres 15.7
2706 Male, age 80, both hemispheres 12.6
2336 Male, age 61, both hemispheres 11.1
2330 Male, age 80, both hemispheres 3.4
Inferior olive
nTPM: 21.0
2563 Male, age 74, both hemispheres 24.6
2085 Female, age 85, both hemispheres 22.3
2178 Male, age 61, both hemispheres 21.0
2379 Male, age 80, both hemispheres 19.4
2628 Female, age 91, both hemispheres 17.5
Kolliker-Fuse nucleus
nTPM: 18.1
2163 Male, age 80, both hemispheres 19.5
2315 Male, age 76, right hemisphere 18.1
2793 Female, age 91, left hemisphere 16.6
Lateral lemniscal nuclei
nTPM: 15.2
2036 Male, age 80, both hemispheres 21.1
2169 Male, age 76, both hemispheres 18.6
2746 Female, age 85, left hemisphere 16.9
2453 Male, age 74, right hemisphere 10.4
2320 Female, age 91, left hemisphere 9.2
Lateral medullary reticular nucleus
nTPM: 19.1
2044 Male, age 76, both hemispheres 23.4
2804 Female, age 91, both hemispheres 20.8
2852 Male, age 80, both hemispheres 20.0
2190 Female, age 85, both hemispheres 17.2
2374 Male, age 61, both hemispheres 16.8
2305 Male, age 74, both hemispheres 16.5
Lateral parabrachial nucleus
nTPM: 17.3
2139 Female, age 85, right hemisphere 22.2
2013 Male, age 80, both hemispheres 21.2
2792 Male, age 76, both hemispheres 17.8
2790 Male, age 61, both hemispheres 8.1
Lateral vestibular nucleus
nTPM: 17.0
2184 Male, age 76, both hemispheres 17.8
2311 Male, age 80, both hemispheres 16.2
Locus coeruleus
nTPM: 19.5
2123 Female, age 91, both hemispheres 24.0
2014 Male, age 55, unknown 22.7
2788 Male, age 74, unknown 19.6
1980 Male, age 76, both hemispheres 19.4
2317 Female, age 72, unknown 19.2
2720 Male, age 74, both hemispheres 16.5
2162 Male, age 80, both hemispheres 15.2
Medial olivary nucleus
nTPM: 22.0
1943 Male, age 61, both hemispheres 32.8
2138 Female, age 91, both hemispheres 21.2
2851 Male, age 80, both hemispheres 17.5
1962 Male, age 76, both hemispheres 16.5
Medial parabrachial nucleus
nTPM: 17.1
2170 Female, age 91, both hemispheres 23.7
2854 Male, age 80, both hemispheres 19.0
2463 Female, age 85, right hemisphere 17.2
2786 Male, age 76, both hemispheres 14.8
2156 Male, age 61, both hemispheres 10.9
Medial periolivary nuclei
nTPM: 15.8
2063 Male, age 76, both hemispheres 24.0
2171 Female, age 85, both hemispheres 17.0
2791 Male, age 74, right hemisphere 15.0
2081 Male, age 80, both hemispheres 12.2
2458 Female, age 91, both hemispheres 10.7
Medial vestibular nucleus
nTPM: 20.3
2624 Male, age 61, both hemispheres 22.7
2803 Female, age 91, both hemispheres 21.6
2093 Male, age 80, both hemispheres 20.8
2134 Male, age 76, both hemispheres 19.9
2743 Female, age 85, both hemispheres 18.8
2801 Male, age 74, both hemispheres 18.0
Motor facial nucleus
nTPM: 15.1
2062 Male, age 76, both hemispheres 22.9
2795 Female, age 91, both hemispheres 20.3
2365 Male, age 74, right hemisphere 17.2
2697 Female, age 85, both hemispheres 13.4
2126 Male, age 61, both hemispheres 12.0
2327 Male, age 80, both hemispheres 4.9
Motor hypoglossal nucleus
nTPM: 19.0
2461 Male, age 61, both hemispheres 24.2
2125 Female, age 91, both hemispheres 23.5
2132 Female, age 85, both hemispheres 18.4
2182 Male, age 80, both hemispheres 14.8
2277 Male, age 76, both hemispheres 13.9
Motor trigeminal nucleus
nTPM: 12.3
2560 Male, age 74, both hemispheres 17.6
2309 Male, age 76, both hemispheres 16.2
2335 Male, age 61, both hemispheres 10.3
2079 Male, age 80, both hemispheres 9.7
2321 Female, age 91, both hemispheres 7.8
Nuclei of the trapezoid body
nTPM: 16.3
1983 Male, age 76, both hemispheres 21.5
2159 Male, age 61, both hemispheres 18.7
2735 Female, age 85, both hemispheres 17.1
2368 Female, age 91, both hemispheres 13.0
2166 Male, age 80, both hemispheres 11.2
Nucleus ambiguus
nTPM: 15.3
2071 Male, age 76, both hemispheres 19.0
2096 Female, age 85, both hemispheres 11.6
Nucleus cuneatus
nTPM: 16.6
2564 Male, age 74, both hemispheres 27.7
2380 Male, age 80, both hemispheres 19.5
2376 Male, age 61, both hemispheres 15.6
2131 Male, age 76, both hemispheres 15.4
2805 Female, age 91, both hemispheres 15.2
2562 Male, age 61, both hemispheres 15.1
2381 Male, age 80, both hemispheres 14.4
2100 Male, age 76, both hemispheres 13.4
2808 Female, age 85, both hemispheres 12.9
Nucleus gracilis
nTPM: 16.6
2627 Male, age 74, both hemispheres 21.0
2382 Male, age 80, both hemispheres 14.5
2299 Female, age 85, both hemispheres 14.2
Nucleus raphe magnus
nTPM: 16.6
2160 Male, age 61, both hemispheres 22.3
2051 Male, age 76, both hemispheres 19.0
2455 Male, age 74, both hemispheres 18.5
2172 Female, age 85, both hemispheres 14.1
2459 Female, age 91, both hemispheres 13.3
2328 Male, age 80, both hemispheres 12.5
Nucleus raphe obscurus
nTPM: 17.5
2800 Male, age 61, midline 20.7
2845 Female, age 85, midline 17.9
2142 Male, age 76, midline 14.1
Nucleus raphe pallidus
nTPM: 24.6
1924 Male, age 61, midline 38.5
2183 Male, age 80, midline 20.3
2145 Male, age 76, midline 15.1
Nucleus tractus solitarii
nTPM: 17.7
2144 Female, age 91, right hemisphere 33.3
2656 Male, age 76, both hemispheres 16.9
2191 Female, age 85, both hemispheres 16.1
2307 Male, age 80, both hemispheres 4.6
Paramedian reticular nucleus
nTPM: 22.7
2052 Male, age 76, both hemispheres 26.2
2050 Female, age 85, both hemispheres 23.8
2057 Male, age 80, both hemispheres 21.4
2313 Male, age 61, both hemispheres 19.6
Parvicellular reticular nuclei
nTPM: 16.0
2119 Male, age 80, both hemispheres 20.2
2095 Male, age 76, both hemispheres 16.9
2558 Male, age 74, both hemispheres 10.8
Parvicellular reticular nuclei, medullary
nTPM: 17.5
2189 Female, age 91, both hemispheres 20.0
2091 Female, age 85, both hemispheres 19.0
2181 Male, age 80, left hemisphere 13.4
Pedunculopontine tegmental nucleus
nTPM: 17.5
2334 Male, age 80, both hemispheres 20.8
1921 Female, age 85, both hemispheres 20.7
2338 Male, age 61, both hemispheres 10.9
Peritrigeminal nucleus
nTPM: 21.3
2067 Female, age 85, both hemispheres 24.8
2136 Male, age 76, both hemispheres 19.6
2179 Male, age 61, both hemispheres 19.6
Pontine nuclei
nTPM: 19.4
2727 Male, age 61, right hemisphere 25.5
1863 Male, age 55, unknown 24.4
2109 Female, age 72, unknown 22.3
2787 Female, age 85, both hemispheres 20.6
1968 Male, age 76, left hemisphere 18.5
2454 Male, age 74, left hemisphere 17.0
2319 Female, age 91, both hemispheres 14.4
2115 Male, age 80, left hemisphere 12.2
Pontine raphe nucleus
nTPM: 19.1
2122 Female, age 85, midline 19.2
2853 Male, age 76, midline 19.1
Posteroventral cochlear nucleus
nTPM: 18.0
2752 Female, age 85, both hemispheres 20.4
2341 Male, age 80, both hemispheres 19.9
2371 Male, age 61, both hemispheres 17.1
2070 Male, age 76, both hemispheres 16.6
2135 Female, age 91, both hemispheres 16.0
Prepositus hypoglossal nucleus
nTPM: 18.7
2855 Female, age 85, right hemisphere 19.8
2086 Male, age 80, both hemispheres 17.6
Principal sensory trigeminal nucleus
nTPM: 16.2
2158 Male, age 61, both hemispheres 19.0
2324 Male, age 76, both hemispheres 16.2
2008 Male, age 80, left hemisphere 15.0
2367 Female, age 91, left hemisphere 14.5
Reticular pontine nucleus, caudal
nTPM: 13.0
2092 Male, age 76, both hemispheres 18.0
2559 Male, age 74, both hemispheres 12.9
2457 Female, age 91, both hemispheres 12.3
2332 Male, age 80, right hemisphere 9.0
Reticular pontine nucleus, oral
nTPM: 18.1
1939 Male, age 80, both hemispheres 25.1
2012 Female, age 85, both hemispheres 21.0
2167 Male, age 76, both hemispheres 17.7
2361 Male, age 74, both hemispheres 13.8
2366 Female, age 91, both hemispheres 12.9
Reticulotegmental nucleus
nTPM: 13.5
2325 Male, age 76, both hemispheres 14.8
2322 Female, age 91, both hemispheres 14.0
2452 Male, age 74, both hemispheres 12.9
2333 Male, age 80, both hemispheres 12.4
Spinal trigeminal nucleus, caudal
nTPM: 15.6
2390 Female, age 91, both hemispheres 24.5
2447 Male, age 76, both hemispheres 18.3
2642 Male, age 74, both hemispheres 12.1
2312 Male, age 61, both hemispheres 12.0
2308 Male, age 80, both hemispheres 11.2
Spinal trigeminal nucleus, interpolar
nTPM: 22.4
2625 Male, age 61, both hemispheres 27.7
2033 Male, age 80, both hemispheres 23.4
2066 Male, age 76, right hemisphere 22.0
2386 Female, age 85, both hemispheres 19.8
2389 Female, age 91, both hemispheres 19.1
Spinal trigeminal nucleus, oral
nTPM: 14.9
2737 Female, age 85, both hemispheres 17.8
1978 Male, age 76, both hemispheres 15.3
2164 Male, age 80, both hemispheres 11.8
Spinal vestibular nucleus
nTPM: 19.1
2806 Female, age 85, both hemispheres 21.7
2384 Male, age 74, both hemispheres 20.6
2186 Female, age 91, both hemispheres 19.1
2748 Male, age 76, both hemispheres 18.7
2780 Male, age 80, both hemispheres 18.6
2796 Male, age 61, both hemispheres 15.9
Subcoeruleus area
nTPM: 16.3
1958 Male, age 80, both hemispheres 21.0
2369 Female, age 85, left hemisphere 19.4
2451 Male, age 74, both hemispheres 15.7
2323 Female, age 91, left hemisphere 15.0
2089 Male, age 76, left hemisphere 10.6
Superior olive
nTPM: 16.1
1875 Female, age 85, both hemispheres 22.5
2020 Male, age 76, both hemispheres 20.9
2364 Male, age 74, right hemisphere 16.4
2561 Female, age 91, both hemispheres 12.7
2329 Male, age 80, right hemisphere 7.9
Superior vestibular nucleus
nTPM: 23.3
2383 Male, age 74, both hemispheres 29.8
2015 Male, age 80, both hemispheres 24.2
2061 Male, age 76, both hemispheres 15.9
Ventral medullary reticular nucleus
nTPM: 17.9
2372 Male, age 61, both hemispheres 18.0
2060 Male, age 76, both hemispheres 17.7
Ventral periolivary nuclei
nTPM: 14.9
2023 Male, age 76, both hemispheres 21.2
2130 Female, age 85, both hemispheres 14.8
2165 Male, age 80, both hemispheres 14.6
2794 Female, age 91, left hemisphere 8.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 18.9
2180 Male, age 61, both hemispheres 21.2
1986 Male, age 76, both hemispheres 20.7
2741 Female, age 85, both hemispheres 19.2
2302 Female, age 91, both hemispheres 17.7
2118 Male, age 80, both hemispheres 15.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 15.5
1959 Male, age 76, both hemispheres 17.8
2840 Female, age 85, both hemispheres 17.6
2359 Male, age 61, both hemispheres 16.2
2161 Male, age 80, both hemispheres 14.0
2449 Male, age 74, both hemispheres 13.9
2456 Female, age 91, both hemispheres 13.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 127.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 121.3
FF:10182-103D2 60 years, female 137.5
FF:10165-103B3 76 years, female 105.1
Medulla oblongata
Scaled Tags Per Million: 112.5
FF:10174-103C3 60 years, female 130.0
FF:10155-103A2 76 years, female 103.8
FF:10038-101F2 18-64 years, mixed 103.8
Pons
Scaled Tags Per Million: 127.4
FF:10033-101E6 18-54 years, mixed 127.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 37.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 34.3
Samples: 4

Max nTPM: 40.7
Min nTPM: 28.8
Sample A Female 40.7
Sample B Female 34.6
Sample C Male 33.2
Sample D Male 28.8
Pons
nTPM: 37.1
Samples: 4

Max nTPM: 39.2
Min nTPM: 34.2
Sample A Female 37.5
Sample B Female 37.3
Sample C Male 39.2
Sample D Male 34.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 15.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 15.6
Samples: 4

Max nTPM: 16.7
Min nTPM: 14.6
Sample A Male 16.2
Sample B Male 16.7
Sample C Female 14.8
Sample D Female 14.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.5
68443184 Antisense, RP_050111_01_E06, Mouse strain C57BL/6J (56 days, male) 5.5
Pons
Expression energy: 4.8
68443184 Antisense, RP_050111_01_E06, Mouse strain C57BL/6J (56 days, male) 4.8

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