PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:109.7 nTPM
FANTOM5:146.3 Scaled Tags Per Million
Pig:30.1 nTPM
Mouse:42.3 nTPM
Allen mouse:4.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 109.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 72.6
2301 Female, age 85, both hemispheres 77.0
2090 Male, age 80, both hemispheres 75.9
2188 Female, age 91, both hemispheres 74.7
1984 Male, age 76, both hemispheres 62.9
Area postrema
nTPM: 109.7
2799 Male, age 61, both hemispheres 135.4
2054 Male, age 76, both hemispheres 103.7
2306 Male, age 80, both hemispheres 90.0
Dorsal cochlear nucleus
nTPM: 77.2
2058 Male, age 76, both hemispheres 79.8
2802 Male, age 74, right hemisphere 79.1
2378 Male, age 80, both hemispheres 77.6
2187 Female, age 91, both hemispheres 76.4
2370 Male, age 61, both hemispheres 73.1
Dorsal medullary reticular nucleus
nTPM: 72.5
2088 Male, age 76, both hemispheres 83.3
2373 Male, age 61, both hemispheres 68.9
2040 Female, age 85, both hemispheres 65.3
Dorsal motor vagal complex
nTPM: 76.3
2185 Male, age 76, both hemispheres 107.2
2643 Male, age 74, both hemispheres 94.0
2797 Male, age 61, both hemispheres 78.5
2807 Female, age 85, both hemispheres 75.2
2133 Female, age 91, both hemispheres 68.4
2844 Male, age 55, unknown 63.7
2813 Female, age 72, unknown 63.2
2000 Male, age 74, unknown 60.0
Dorsal tegmental nucleus
nTPM: 81.1
2358 Male, age 61, both hemispheres 111.7
2083 Male, age 80, both hemispheres 76.8
1936 Male, age 76, left hemisphere 68.9
2326 Male, age 74, both hemispheres 66.9
Dorsolateral tegmental area
nTPM: 75.4
2337 Male, age 61, both hemispheres 111.5
2654 Male, age 80, both hemispheres 76.8
2751 Female, age 85, both hemispheres 67.1
2141 Male, age 76, both hemispheres 63.5
2360 Male, age 74, both hemispheres 57.8
Gigantocellular reticular nuclei, medullary
nTPM: 65.6
2314 Male, age 61, both hemispheres 70.4
2387 Female, age 91, both hemispheres 67.8
2310 Male, age 80, both hemispheres 65.7
2462 Male, age 74, both hemispheres 64.1
2022 Male, age 76, right hemisphere 63.0
1876 Female, age 85, both hemispheres 62.4
Gigantocellular reticular nuclei, pars
nTPM: 62.8
2706 Male, age 80, both hemispheres 70.3
2330 Male, age 80, both hemispheres 67.1
2336 Male, age 61, both hemispheres 65.9
2084 Female, age 85, both hemispheres 61.2
2168 Male, age 76, both hemispheres 49.3
Inferior olive
nTPM: 77.4
2379 Male, age 80, both hemispheres 82.7
2178 Male, age 61, both hemispheres 78.4
2628 Female, age 91, both hemispheres 77.3
2085 Female, age 85, both hemispheres 75.2
2563 Male, age 74, both hemispheres 73.3
Kolliker-Fuse nucleus
nTPM: 76.5
2315 Male, age 76, right hemisphere 86.4
2793 Female, age 91, left hemisphere 76.8
2163 Male, age 80, both hemispheres 66.2
Lateral lemniscal nuclei
nTPM: 64.2
2320 Female, age 91, left hemisphere 72.3
2746 Female, age 85, left hemisphere 68.8
2036 Male, age 80, both hemispheres 67.0
2453 Male, age 74, right hemisphere 63.3
2169 Male, age 76, both hemispheres 49.7
Lateral medullary reticular nucleus
nTPM: 78.3
2852 Male, age 80, both hemispheres 93.4
2305 Male, age 74, both hemispheres 81.4
2044 Male, age 76, both hemispheres 79.3
2190 Female, age 85, both hemispheres 75.8
2374 Male, age 61, both hemispheres 75.5
2804 Female, age 91, both hemispheres 64.6
Lateral parabrachial nucleus
nTPM: 71.4
2792 Male, age 76, both hemispheres 80.9
2790 Male, age 61, both hemispheres 73.2
2013 Male, age 80, both hemispheres 72.4
2139 Female, age 85, right hemisphere 59.2
Lateral vestibular nucleus
nTPM: 68.4
2311 Male, age 80, both hemispheres 72.6
2184 Male, age 76, both hemispheres 64.3
Locus coeruleus
nTPM: 58.6
1980 Male, age 76, both hemispheres 66.3
2720 Male, age 74, both hemispheres 65.1
2123 Female, age 91, both hemispheres 64.5
2162 Male, age 80, both hemispheres 61.4
2317 Female, age 72, unknown 58.4
2014 Male, age 55, unknown 51.2
2788 Male, age 74, unknown 43.0
Medial olivary nucleus
nTPM: 84.6
1962 Male, age 76, both hemispheres 101.7
1943 Male, age 61, both hemispheres 90.7
2851 Male, age 80, both hemispheres 77.7
2138 Female, age 91, both hemispheres 68.2
Medial parabrachial nucleus
nTPM: 71.6
2170 Female, age 91, both hemispheres 76.8
2786 Male, age 76, both hemispheres 72.7
2156 Male, age 61, both hemispheres 72.4
2463 Female, age 85, right hemisphere 68.9
2854 Male, age 80, both hemispheres 67.5
Medial periolivary nuclei
nTPM: 63.1
2081 Male, age 80, both hemispheres 81.7
2458 Female, age 91, both hemispheres 66.2
2791 Male, age 74, right hemisphere 59.9
2063 Male, age 76, both hemispheres 57.6
2171 Female, age 85, both hemispheres 49.8
Medial vestibular nucleus
nTPM: 66.3
2134 Male, age 76, both hemispheres 79.5
2801 Male, age 74, both hemispheres 71.2
2624 Male, age 61, both hemispheres 69.9
2093 Male, age 80, both hemispheres 65.6
2803 Female, age 91, both hemispheres 57.8
2743 Female, age 85, both hemispheres 53.5
Motor facial nucleus
nTPM: 62.7
2126 Male, age 61, both hemispheres 72.9
2365 Male, age 74, right hemisphere 66.6
2697 Female, age 85, both hemispheres 63.8
2795 Female, age 91, both hemispheres 63.5
2327 Male, age 80, both hemispheres 56.1
2062 Male, age 76, both hemispheres 53.3
Motor hypoglossal nucleus
nTPM: 79.5
2277 Male, age 76, both hemispheres 107.3
2182 Male, age 80, both hemispheres 94.4
2132 Female, age 85, both hemispheres 68.8
2125 Female, age 91, both hemispheres 66.5
2461 Male, age 61, both hemispheres 60.3
Motor trigeminal nucleus
nTPM: 68.6
2321 Female, age 91, both hemispheres 77.7
2560 Male, age 74, both hemispheres 75.2
2335 Male, age 61, both hemispheres 66.1
2309 Male, age 76, both hemispheres 63.4
2079 Male, age 80, both hemispheres 60.9
Nuclei of the trapezoid body
nTPM: 58.7
2166 Male, age 80, both hemispheres 69.5
2368 Female, age 91, both hemispheres 64.2
1983 Male, age 76, both hemispheres 57.7
2159 Male, age 61, both hemispheres 51.6
2735 Female, age 85, both hemispheres 50.3
Nucleus ambiguus
nTPM: 92.3
2071 Male, age 76, both hemispheres 106.3
2096 Female, age 85, both hemispheres 78.3
Nucleus cuneatus
nTPM: 81.8
2100 Male, age 76, both hemispheres 88.4
2564 Male, age 74, both hemispheres 87.7
2380 Male, age 80, both hemispheres 87.3
2131 Male, age 76, both hemispheres 81.9
2808 Female, age 85, both hemispheres 81.6
2805 Female, age 91, both hemispheres 81.0
2381 Male, age 80, both hemispheres 79.4
2376 Male, age 61, both hemispheres 74.4
2562 Male, age 61, both hemispheres 74.2
Nucleus gracilis
nTPM: 87.8
2382 Male, age 80, both hemispheres 93.7
2299 Female, age 85, both hemispheres 86.1
2627 Male, age 74, both hemispheres 83.5
Nucleus raphe magnus
nTPM: 60.2
2051 Male, age 76, both hemispheres 74.0
2459 Female, age 91, both hemispheres 72.8
2328 Male, age 80, both hemispheres 62.8
2455 Male, age 74, both hemispheres 56.3
2172 Female, age 85, both hemispheres 49.7
2160 Male, age 61, both hemispheres 45.5
Nucleus raphe obscurus
nTPM: 86.3
2142 Male, age 76, midline 111.2
2845 Female, age 85, midline 75.8
2800 Male, age 61, midline 71.9
Nucleus raphe pallidus
nTPM: 92.0
1924 Male, age 61, midline 105.3
2145 Male, age 76, midline 96.5
2183 Male, age 80, midline 74.3
Nucleus tractus solitarii
nTPM: 63.9
2656 Male, age 76, both hemispheres 83.2
2307 Male, age 80, both hemispheres 71.6
2191 Female, age 85, both hemispheres 64.0
2144 Female, age 91, right hemisphere 36.6
Paramedian reticular nucleus
nTPM: 63.5
2052 Male, age 76, both hemispheres 69.3
2057 Male, age 80, both hemispheres 65.7
2313 Male, age 61, both hemispheres 63.0
2050 Female, age 85, both hemispheres 55.8
Parvicellular reticular nuclei
nTPM: 69.3
2119 Male, age 80, both hemispheres 72.4
2558 Male, age 74, both hemispheres 70.3
2095 Male, age 76, both hemispheres 65.3
Parvicellular reticular nuclei, medullary
nTPM: 63.1
2091 Female, age 85, both hemispheres 68.6
2181 Male, age 80, left hemisphere 61.4
2189 Female, age 91, both hemispheres 59.4
Pedunculopontine tegmental nucleus
nTPM: 63.7
2338 Male, age 61, both hemispheres 71.6
2334 Male, age 80, both hemispheres 63.5
1921 Female, age 85, both hemispheres 56.1
Peritrigeminal nucleus
nTPM: 81.6
2136 Male, age 76, both hemispheres 93.6
2067 Female, age 85, both hemispheres 83.2
2179 Male, age 61, both hemispheres 68.0
Pontine nuclei
nTPM: 67.1
2115 Male, age 80, left hemisphere 84.8
2319 Female, age 91, both hemispheres 73.0
2109 Female, age 72, unknown 71.5
2454 Male, age 74, left hemisphere 68.8
1863 Male, age 55, unknown 65.2
2787 Female, age 85, both hemispheres 60.6
1968 Male, age 76, left hemisphere 60.1
2727 Male, age 61, right hemisphere 52.4
Pontine raphe nucleus
nTPM: 56.3
2853 Male, age 76, midline 61.5
2122 Female, age 85, midline 51.1
Posteroventral cochlear nucleus
nTPM: 73.8
2135 Female, age 91, both hemispheres 82.2
2341 Male, age 80, both hemispheres 81.1
2070 Male, age 76, both hemispheres 80.6
2371 Male, age 61, both hemispheres 70.3
2752 Female, age 85, both hemispheres 54.8
Prepositus hypoglossal nucleus
nTPM: 62.4
2086 Male, age 80, both hemispheres 64.6
2855 Female, age 85, right hemisphere 60.2
Principal sensory trigeminal nucleus
nTPM: 61.9
2367 Female, age 91, left hemisphere 75.6
2324 Male, age 76, both hemispheres 64.5
2008 Male, age 80, left hemisphere 56.0
2158 Male, age 61, both hemispheres 51.4
Reticular pontine nucleus, caudal
nTPM: 67.6
2559 Male, age 74, both hemispheres 74.1
2457 Female, age 91, both hemispheres 70.8
2092 Male, age 76, both hemispheres 64.3
2332 Male, age 80, right hemisphere 61.1
Reticular pontine nucleus, oral
nTPM: 68.0
2361 Male, age 74, both hemispheres 77.9
1939 Male, age 80, both hemispheres 71.3
2366 Female, age 91, both hemispheres 69.2
2167 Male, age 76, both hemispheres 64.5
2012 Female, age 85, both hemispheres 56.9
Reticulotegmental nucleus
nTPM: 64.5
2452 Male, age 74, both hemispheres 72.7
2333 Male, age 80, both hemispheres 67.2
2322 Female, age 91, both hemispheres 65.4
2325 Male, age 76, both hemispheres 52.6
Spinal trigeminal nucleus, caudal
nTPM: 76.0
2642 Male, age 74, both hemispheres 81.9
2447 Male, age 76, both hemispheres 80.3
2312 Male, age 61, both hemispheres 78.9
2308 Male, age 80, both hemispheres 77.6
2390 Female, age 91, both hemispheres 61.5
Spinal trigeminal nucleus, interpolar
nTPM: 66.3
2033 Male, age 80, both hemispheres 71.1
2066 Male, age 76, right hemisphere 68.7
2625 Male, age 61, both hemispheres 64.9
2386 Female, age 85, both hemispheres 64.6
2389 Female, age 91, both hemispheres 62.0
Spinal trigeminal nucleus, oral
nTPM: 68.1
2164 Male, age 80, both hemispheres 75.2
1978 Male, age 76, both hemispheres 66.2
2737 Female, age 85, both hemispheres 62.9
Spinal vestibular nucleus
nTPM: 69.3
2748 Male, age 76, both hemispheres 84.5
2384 Male, age 74, both hemispheres 75.5
2780 Male, age 80, both hemispheres 74.9
2186 Female, age 91, both hemispheres 63.2
2806 Female, age 85, both hemispheres 59.1
2796 Male, age 61, both hemispheres 58.9
Subcoeruleus area
nTPM: 65.0
2451 Male, age 74, both hemispheres 78.2
2369 Female, age 85, left hemisphere 70.6
2089 Male, age 76, left hemisphere 60.1
1958 Male, age 80, both hemispheres 59.3
2323 Female, age 91, left hemisphere 57.0
Superior olive
nTPM: 66.1
2561 Female, age 91, both hemispheres 73.0
2329 Male, age 80, right hemisphere 72.6
2364 Male, age 74, right hemisphere 66.0
2020 Male, age 76, both hemispheres 64.2
1875 Female, age 85, both hemispheres 54.9
Superior vestibular nucleus
nTPM: 71.6
2061 Male, age 76, both hemispheres 91.2
2015 Male, age 80, both hemispheres 68.6
2383 Male, age 74, both hemispheres 54.9
Ventral medullary reticular nucleus
nTPM: 79.6
2060 Male, age 76, both hemispheres 84.7
2372 Male, age 61, both hemispheres 74.5
Ventral periolivary nuclei
nTPM: 57.9
2023 Male, age 76, both hemispheres 61.3
2794 Female, age 91, left hemisphere 59.1
2165 Male, age 80, both hemispheres 58.8
2130 Female, age 85, both hemispheres 52.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 75.1
1986 Male, age 76, both hemispheres 88.5
2118 Male, age 80, both hemispheres 83.3
2741 Female, age 85, both hemispheres 69.5
2302 Female, age 91, both hemispheres 67.3
2180 Male, age 61, both hemispheres 67.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 69.1
2359 Male, age 61, both hemispheres 81.5
2456 Female, age 91, both hemispheres 75.3
2161 Male, age 80, both hemispheres 75.0
2840 Female, age 85, both hemispheres 62.4
1959 Male, age 76, both hemispheres 60.4
2449 Male, age 74, both hemispheres 60.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 146.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 128.9
FF:10182-103D2 60 years, female 143.0
FF:10165-103B3 76 years, female 114.7
Medulla oblongata
Scaled Tags Per Million: 146.3
FF:10174-103C3 60 years, female 183.9
FF:10038-101F2 18-64 years, mixed 128.6
FF:10155-103A2 76 years, female 126.4
Pons
Scaled Tags Per Million: 86.0
FF:10033-101E6 18-54 years, mixed 86.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 30.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 30.1
Samples: 4

Max nTPM: 31.9
Min nTPM: 28.1
Sample A Female 28.1
Sample B Female 28.8
Sample C Male 31.9
Sample D Male 31.6
Pons
nTPM: 25.4
Samples: 4

Max nTPM: 28.8
Min nTPM: 23.1
Sample A Female 26.6
Sample B Female 23.2
Sample C Male 23.1
Sample D Male 28.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 42.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 42.3
Samples: 4

Max nTPM: 44.2
Min nTPM: 40.6
Sample A Male 44.2
Sample B Male 40.6
Sample C Female 43.5
Sample D Female 40.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.3
68844492 Antisense, RP_050222_01_G08, Mouse strain C57BL/6J (56 days, male) 4.3
Pons
Expression energy: 3.5
68844492 Antisense, RP_050222_01_G08, Mouse strain C57BL/6J (56 days, male) 3.5

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