PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:90.8 nTPM
FANTOM5:234.5 Scaled Tags Per Million
Pig:97.1 nTPM
Mouse:177.0 nTPM
Allen mouse:2.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 90.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 61.6
2188 Female, age 91, both hemispheres 67.3
2090 Male, age 80, both hemispheres 62.2
2301 Female, age 85, both hemispheres 58.8
1984 Male, age 76, both hemispheres 58.1
Area postrema
nTPM: 63.9
2054 Male, age 76, both hemispheres 78.6
2799 Male, age 61, both hemispheres 62.1
2306 Male, age 80, both hemispheres 51.1
Dorsal cochlear nucleus
nTPM: 71.3
2378 Male, age 80, both hemispheres 74.3
2802 Male, age 74, right hemisphere 73.3
2187 Female, age 91, both hemispheres 71.9
2370 Male, age 61, both hemispheres 69.4
2058 Male, age 76, both hemispheres 67.8
Dorsal medullary reticular nucleus
nTPM: 68.7
2040 Female, age 85, both hemispheres 83.2
2373 Male, age 61, both hemispheres 63.7
2088 Male, age 76, both hemispheres 59.2
Dorsal motor vagal complex
nTPM: 62.9
2000 Male, age 74, unknown 77.4
2133 Female, age 91, both hemispheres 72.6
2813 Female, age 72, unknown 69.3
2844 Male, age 55, unknown 63.0
2185 Male, age 76, both hemispheres 61.4
2807 Female, age 85, both hemispheres 56.7
2643 Male, age 74, both hemispheres 52.8
2797 Male, age 61, both hemispheres 49.7
Dorsal tegmental nucleus
nTPM: 72.1
1936 Male, age 76, left hemisphere 74.3
2358 Male, age 61, both hemispheres 73.8
2326 Male, age 74, both hemispheres 71.4
2083 Male, age 80, both hemispheres 69.0
Dorsolateral tegmental area
nTPM: 75.0
2360 Male, age 74, both hemispheres 85.0
2337 Male, age 61, both hemispheres 77.4
2751 Female, age 85, both hemispheres 75.3
2654 Male, age 80, both hemispheres 72.1
2141 Male, age 76, both hemispheres 65.1
Gigantocellular reticular nuclei, medullary
nTPM: 69.1
1876 Female, age 85, both hemispheres 80.0
2462 Male, age 74, both hemispheres 77.0
2387 Female, age 91, both hemispheres 72.7
2022 Male, age 76, right hemisphere 70.5
2310 Male, age 80, both hemispheres 58.0
2314 Male, age 61, both hemispheres 56.4
Gigantocellular reticular nuclei, pars
nTPM: 62.6
2084 Female, age 85, both hemispheres 73.2
2168 Male, age 76, both hemispheres 66.2
2336 Male, age 61, both hemispheres 61.1
2706 Male, age 80, both hemispheres 60.7
2330 Male, age 80, both hemispheres 52.0
Inferior olive
nTPM: 65.7
2085 Female, age 85, both hemispheres 74.5
2563 Male, age 74, both hemispheres 73.5
2379 Male, age 80, both hemispheres 69.2
2178 Male, age 61, both hemispheres 57.7
2628 Female, age 91, both hemispheres 53.7
Kolliker-Fuse nucleus
nTPM: 71.5
2315 Male, age 76, right hemisphere 83.1
2163 Male, age 80, both hemispheres 71.5
2793 Female, age 91, left hemisphere 59.8
Lateral lemniscal nuclei
nTPM: 66.6
2036 Male, age 80, both hemispheres 74.3
2746 Female, age 85, left hemisphere 70.0
2169 Male, age 76, both hemispheres 68.4
2453 Male, age 74, right hemisphere 65.0
2320 Female, age 91, left hemisphere 55.5
Lateral medullary reticular nucleus
nTPM: 72.1
2305 Male, age 74, both hemispheres 92.8
2044 Male, age 76, both hemispheres 81.6
2804 Female, age 91, both hemispheres 71.2
2190 Female, age 85, both hemispheres 67.4
2374 Male, age 61, both hemispheres 63.3
2852 Male, age 80, both hemispheres 56.6
Lateral parabrachial nucleus
nTPM: 75.2
2792 Male, age 76, both hemispheres 83.1
2139 Female, age 85, right hemisphere 74.8
2013 Male, age 80, both hemispheres 73.8
2790 Male, age 61, both hemispheres 69.0
Lateral vestibular nucleus
nTPM: 62.7
2184 Male, age 76, both hemispheres 65.0
2311 Male, age 80, both hemispheres 60.5
Locus coeruleus
nTPM: 90.8
2014 Male, age 55, unknown 107.3
2123 Female, age 91, both hemispheres 101.7
2720 Male, age 74, both hemispheres 95.4
2317 Female, age 72, unknown 85.2
2788 Male, age 74, unknown 84.6
1980 Male, age 76, both hemispheres 81.4
2162 Male, age 80, both hemispheres 79.7
Medial olivary nucleus
nTPM: 70.6
1962 Male, age 76, both hemispheres 75.7
2138 Female, age 91, both hemispheres 72.9
1943 Male, age 61, both hemispheres 70.1
2851 Male, age 80, both hemispheres 63.7
Medial parabrachial nucleus
nTPM: 67.6
2170 Female, age 91, both hemispheres 75.1
2854 Male, age 80, both hemispheres 70.1
2786 Male, age 76, both hemispheres 65.1
2156 Male, age 61, both hemispheres 64.9
2463 Female, age 85, right hemisphere 62.7
Medial periolivary nuclei
nTPM: 72.1
2791 Male, age 74, right hemisphere 89.8
2171 Female, age 85, both hemispheres 79.8
2063 Male, age 76, both hemispheres 72.1
2081 Male, age 80, both hemispheres 63.6
2458 Female, age 91, both hemispheres 55.1
Medial vestibular nucleus
nTPM: 74.9
2801 Male, age 74, both hemispheres 81.4
2134 Male, age 76, both hemispheres 76.9
2803 Female, age 91, both hemispheres 76.5
2743 Female, age 85, both hemispheres 74.8
2093 Male, age 80, both hemispheres 70.0
2624 Male, age 61, both hemispheres 69.7
Motor facial nucleus
nTPM: 68.3
2365 Male, age 74, right hemisphere 84.5
2062 Male, age 76, both hemispheres 77.6
2697 Female, age 85, both hemispheres 67.6
2126 Male, age 61, both hemispheres 64.2
2795 Female, age 91, both hemispheres 61.2
2327 Male, age 80, both hemispheres 54.7
Motor hypoglossal nucleus
nTPM: 67.8
2461 Male, age 61, both hemispheres 74.4
2132 Female, age 85, both hemispheres 73.1
2125 Female, age 91, both hemispheres 73.0
2277 Male, age 76, both hemispheres 66.3
2182 Male, age 80, both hemispheres 52.3
Motor trigeminal nucleus
nTPM: 60.8
2560 Male, age 74, both hemispheres 65.3
2079 Male, age 80, both hemispheres 64.0
2309 Male, age 76, both hemispheres 61.9
2335 Male, age 61, both hemispheres 57.7
2321 Female, age 91, both hemispheres 55.0
Nuclei of the trapezoid body
nTPM: 72.7
2159 Male, age 61, both hemispheres 84.5
2735 Female, age 85, both hemispheres 79.2
1983 Male, age 76, both hemispheres 76.5
2166 Male, age 80, both hemispheres 62.3
2368 Female, age 91, both hemispheres 61.3
Nucleus ambiguus
nTPM: 61.1
2071 Male, age 76, both hemispheres 73.3
2096 Female, age 85, both hemispheres 48.9
Nucleus cuneatus
nTPM: 60.3
2376 Male, age 61, both hemispheres 70.6
2380 Male, age 80, both hemispheres 69.6
2564 Male, age 74, both hemispheres 64.7
2808 Female, age 85, both hemispheres 62.0
2562 Male, age 61, both hemispheres 59.6
2131 Male, age 76, both hemispheres 58.7
2381 Male, age 80, both hemispheres 56.0
2100 Male, age 76, both hemispheres 54.8
2805 Female, age 91, both hemispheres 46.4
Nucleus gracilis
nTPM: 57.1
2627 Male, age 74, both hemispheres 67.3
2382 Male, age 80, both hemispheres 55.5
2299 Female, age 85, both hemispheres 48.4
Nucleus raphe magnus
nTPM: 72.7
2160 Male, age 61, both hemispheres 92.2
2455 Male, age 74, both hemispheres 79.0
2172 Female, age 85, both hemispheres 76.0
2051 Male, age 76, both hemispheres 68.2
2459 Female, age 91, both hemispheres 60.5
2328 Male, age 80, both hemispheres 60.4
Nucleus raphe obscurus
nTPM: 71.1
2142 Male, age 76, midline 76.6
2845 Female, age 85, midline 69.7
2800 Male, age 61, midline 67.0
Nucleus raphe pallidus
nTPM: 76.4
1924 Male, age 61, midline 89.9
2183 Male, age 80, midline 73.8
2145 Male, age 76, midline 65.7
Nucleus tractus solitarii
nTPM: 70.6
2144 Female, age 91, right hemisphere 105.6
2656 Male, age 76, both hemispheres 70.9
2191 Female, age 85, both hemispheres 57.2
2307 Male, age 80, both hemispheres 48.9
Paramedian reticular nucleus
nTPM: 82.5
2050 Female, age 85, both hemispheres 87.5
2313 Male, age 61, both hemispheres 85.4
2052 Male, age 76, both hemispheres 79.2
2057 Male, age 80, both hemispheres 78.0
Parvicellular reticular nuclei
nTPM: 67.5
2119 Male, age 80, both hemispheres 75.5
2095 Male, age 76, both hemispheres 67.3
2558 Male, age 74, both hemispheres 59.7
Parvicellular reticular nuclei, medullary
nTPM: 65.9
2189 Female, age 91, both hemispheres 69.8
2091 Female, age 85, both hemispheres 68.1
2181 Male, age 80, left hemisphere 59.8
Pedunculopontine tegmental nucleus
nTPM: 74.4
2334 Male, age 80, both hemispheres 77.6
1921 Female, age 85, both hemispheres 74.8
2338 Male, age 61, both hemispheres 70.7
Peritrigeminal nucleus
nTPM: 74.8
2179 Male, age 61, both hemispheres 77.0
2136 Male, age 76, both hemispheres 74.1
2067 Female, age 85, both hemispheres 73.4
Pontine nuclei
nTPM: 75.8
2727 Male, age 61, right hemisphere 92.6
1863 Male, age 55, unknown 88.2
2109 Female, age 72, unknown 81.0
2454 Male, age 74, left hemisphere 78.4
2787 Female, age 85, both hemispheres 76.5
1968 Male, age 76, left hemisphere 67.3
2319 Female, age 91, both hemispheres 62.0
2115 Male, age 80, left hemisphere 60.4
Pontine raphe nucleus
nTPM: 77.7
2122 Female, age 85, midline 80.1
2853 Male, age 76, midline 75.3
Posteroventral cochlear nucleus
nTPM: 67.8
2752 Female, age 85, both hemispheres 78.9
2371 Male, age 61, both hemispheres 66.5
2341 Male, age 80, both hemispheres 65.2
2070 Male, age 76, both hemispheres 64.9
2135 Female, age 91, both hemispheres 63.8
Prepositus hypoglossal nucleus
nTPM: 71.6
2855 Female, age 85, right hemisphere 77.5
2086 Male, age 80, both hemispheres 65.7
Principal sensory trigeminal nucleus
nTPM: 72.4
2158 Male, age 61, both hemispheres 81.2
2008 Male, age 80, left hemisphere 80.2
2324 Male, age 76, both hemispheres 66.7
2367 Female, age 91, left hemisphere 61.6
Reticular pontine nucleus, caudal
nTPM: 62.2
2559 Male, age 74, both hemispheres 69.1
2092 Male, age 76, both hemispheres 67.0
2332 Male, age 80, right hemisphere 58.2
2457 Female, age 91, both hemispheres 54.5
Reticular pontine nucleus, oral
nTPM: 70.7
2012 Female, age 85, both hemispheres 78.8
1939 Male, age 80, both hemispheres 75.5
2361 Male, age 74, both hemispheres 71.1
2167 Male, age 76, both hemispheres 68.6
2366 Female, age 91, both hemispheres 59.4
Reticulotegmental nucleus
nTPM: 66.9
2325 Male, age 76, both hemispheres 68.2
2452 Male, age 74, both hemispheres 68.2
2322 Female, age 91, both hemispheres 67.3
2333 Male, age 80, both hemispheres 63.9
Spinal trigeminal nucleus, caudal
nTPM: 65.1
2390 Female, age 91, both hemispheres 82.1
2447 Male, age 76, both hemispheres 65.2
2642 Male, age 74, both hemispheres 60.7
2312 Male, age 61, both hemispheres 59.5
2308 Male, age 80, both hemispheres 58.0
Spinal trigeminal nucleus, interpolar
nTPM: 78.4
2625 Male, age 61, both hemispheres 84.1
2386 Female, age 85, both hemispheres 79.5
2066 Male, age 76, right hemisphere 79.3
2033 Male, age 80, both hemispheres 76.2
2389 Female, age 91, both hemispheres 72.9
Spinal trigeminal nucleus, oral
nTPM: 64.2
2737 Female, age 85, both hemispheres 71.7
2164 Male, age 80, both hemispheres 61.3
1978 Male, age 76, both hemispheres 59.5
Spinal vestibular nucleus
nTPM: 70.0
2806 Female, age 85, both hemispheres 73.8
2796 Male, age 61, both hemispheres 73.0
2186 Female, age 91, both hemispheres 72.3
2780 Male, age 80, both hemispheres 68.3
2384 Male, age 74, both hemispheres 68.2
2748 Male, age 76, both hemispheres 64.5
Subcoeruleus area
nTPM: 71.4
1958 Male, age 80, both hemispheres 80.3
2323 Female, age 91, left hemisphere 73.2
2369 Female, age 85, left hemisphere 72.3
2451 Male, age 74, both hemispheres 68.4
2089 Male, age 76, left hemisphere 63.0
Superior olive
nTPM: 73.4
2364 Male, age 74, right hemisphere 90.3
1875 Female, age 85, both hemispheres 87.6
2020 Male, age 76, both hemispheres 69.0
2329 Male, age 80, right hemisphere 62.4
2561 Female, age 91, both hemispheres 57.5
Superior vestibular nucleus
nTPM: 79.0
2383 Male, age 74, both hemispheres 92.8
2015 Male, age 80, both hemispheres 74.4
2061 Male, age 76, both hemispheres 69.9
Ventral medullary reticular nucleus
nTPM: 64.7
2372 Male, age 61, both hemispheres 67.3
2060 Male, age 76, both hemispheres 62.0
Ventral periolivary nuclei
nTPM: 70.1
2023 Male, age 76, both hemispheres 78.7
2130 Female, age 85, both hemispheres 71.9
2165 Male, age 80, both hemispheres 69.0
2794 Female, age 91, left hemisphere 60.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 70.0
2741 Female, age 85, both hemispheres 78.4
1986 Male, age 76, both hemispheres 77.3
2180 Male, age 61, both hemispheres 67.6
2302 Female, age 91, both hemispheres 65.5
2118 Male, age 80, both hemispheres 61.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 72.0
2359 Male, age 61, both hemispheres 92.2
2840 Female, age 85, both hemispheres 74.2
1959 Male, age 76, both hemispheres 71.4
2449 Male, age 74, both hemispheres 69.4
2161 Male, age 80, both hemispheres 67.2
2456 Female, age 91, both hemispheres 57.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 234.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 234.5
FF:10182-103D2 60 years, female 269.5
FF:10165-103B3 76 years, female 199.5
Medulla oblongata
Scaled Tags Per Million: 217.5
FF:10174-103C3 60 years, female 304.6
FF:10155-103A2 76 years, female 217.0
FF:10038-101F2 18-64 years, mixed 130.8
Pons
Scaled Tags Per Million: 164.5
FF:10033-101E6 18-54 years, mixed 164.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 97.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 77.5
Samples: 4

Max nTPM: 86.0
Min nTPM: 72.0
Sample A Female 86.0
Sample B Female 72.0
Sample C Male 74.9
Sample D Male 76.9
Pons
nTPM: 97.1
Samples: 4

Max nTPM: 114.1
Min nTPM: 74.9
Sample A Female 114.1
Sample B Female 74.9
Sample C Male 104.2
Sample D Male 95.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 177.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 177.0
Samples: 4

Max nTPM: 180.6
Min nTPM: 174.0
Sample A Male 174.0
Sample B Male 178.8
Sample C Female 174.5
Sample D Female 180.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.0
68191486 Antisense, RP_041129_01_C07, Mouse strain C57BL/6J (56 days, male) 2.8
878 Antisense, RP_Baylor_102991, Mouse strain C57BL/6J (56 days, male) 1.2
Pons
Expression energy: 2.2
68191486 Antisense, RP_041129_01_C07, Mouse strain C57BL/6J (56 days, male) 3.0
878 Antisense, RP_Baylor_102991, Mouse strain C57BL/6J (56 days, male) 1.5

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