PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:158.5 nTPM
FANTOM5:289.1 Scaled Tags Per Million
Pig:293.0 nTPM
Mouse:92.8 nTPM
Allen mouse:9.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 158.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 120.8
2188 Female, age 91, both hemispheres 135.0
2090 Male, age 80, both hemispheres 132.2
2301 Female, age 85, both hemispheres 127.0
1984 Male, age 76, both hemispheres 89.0
Area postrema
nTPM: 112.0
2306 Male, age 80, both hemispheres 149.4
2799 Male, age 61, both hemispheres 104.6
2054 Male, age 76, both hemispheres 81.9
Dorsal cochlear nucleus
nTPM: 115.8
2187 Female, age 91, both hemispheres 129.1
2378 Male, age 80, both hemispheres 126.9
2802 Male, age 74, right hemisphere 115.0
2058 Male, age 76, both hemispheres 109.9
2370 Male, age 61, both hemispheres 98.3
Dorsal medullary reticular nucleus
nTPM: 113.8
2040 Female, age 85, both hemispheres 138.8
2373 Male, age 61, both hemispheres 104.9
2088 Male, age 76, both hemispheres 97.8
Dorsal motor vagal complex
nTPM: 93.6
2000 Male, age 74, unknown 116.5
2185 Male, age 76, both hemispheres 108.6
2133 Female, age 91, both hemispheres 103.4
2844 Male, age 55, unknown 88.9
2643 Male, age 74, both hemispheres 88.1
2813 Female, age 72, unknown 85.0
2807 Female, age 85, both hemispheres 79.4
2797 Male, age 61, both hemispheres 78.9
Dorsal tegmental nucleus
nTPM: 110.4
2083 Male, age 80, both hemispheres 132.3
2326 Male, age 74, both hemispheres 115.4
2358 Male, age 61, both hemispheres 100.5
1936 Male, age 76, left hemisphere 93.2
Dorsolateral tegmental area
nTPM: 119.5
2751 Female, age 85, both hemispheres 163.6
2337 Male, age 61, both hemispheres 133.6
2654 Male, age 80, both hemispheres 128.3
2360 Male, age 74, both hemispheres 89.8
2141 Male, age 76, both hemispheres 82.1
Gigantocellular reticular nuclei, medullary
nTPM: 126.5
2314 Male, age 61, both hemispheres 152.8
1876 Female, age 85, both hemispheres 145.6
2387 Female, age 91, both hemispheres 139.6
2022 Male, age 76, right hemisphere 113.9
2310 Male, age 80, both hemispheres 105.4
2462 Male, age 74, both hemispheres 101.7
Gigantocellular reticular nuclei, pars
nTPM: 106.2
2084 Female, age 85, both hemispheres 113.4
2168 Male, age 76, both hemispheres 113.2
2336 Male, age 61, both hemispheres 111.3
2706 Male, age 80, both hemispheres 99.4
2330 Male, age 80, both hemispheres 93.7
Inferior olive
nTPM: 129.0
2563 Male, age 74, both hemispheres 147.7
2178 Male, age 61, both hemispheres 138.5
2379 Male, age 80, both hemispheres 126.9
2085 Female, age 85, both hemispheres 125.2
2628 Female, age 91, both hemispheres 106.8
Kolliker-Fuse nucleus
nTPM: 120.7
2793 Female, age 91, left hemisphere 123.9
2163 Male, age 80, both hemispheres 120.7
2315 Male, age 76, right hemisphere 117.4
Lateral lemniscal nuclei
nTPM: 114.6
2169 Male, age 76, both hemispheres 117.9
2320 Female, age 91, left hemisphere 116.6
2746 Female, age 85, left hemisphere 115.7
2036 Male, age 80, both hemispheres 112.9
2453 Male, age 74, right hemisphere 109.9
Lateral medullary reticular nucleus
nTPM: 139.1
2305 Male, age 74, both hemispheres 180.8
2852 Male, age 80, both hemispheres 144.5
2190 Female, age 85, both hemispheres 140.9
2374 Male, age 61, both hemispheres 128.1
2044 Male, age 76, both hemispheres 126.2
2804 Female, age 91, both hemispheres 114.1
Lateral parabrachial nucleus
nTPM: 118.2
2013 Male, age 80, both hemispheres 133.9
2792 Male, age 76, both hemispheres 133.8
2139 Female, age 85, right hemisphere 114.1
2790 Male, age 61, both hemispheres 91.0
Lateral vestibular nucleus
nTPM: 115.3
2311 Male, age 80, both hemispheres 119.4
2184 Male, age 76, both hemispheres 111.2
Locus coeruleus
nTPM: 101.0
2014 Male, age 55, unknown 118.8
2123 Female, age 91, both hemispheres 105.2
2788 Male, age 74, unknown 98.9
2317 Female, age 72, unknown 98.4
2162 Male, age 80, both hemispheres 97.3
1980 Male, age 76, both hemispheres 95.7
2720 Male, age 74, both hemispheres 92.6
Medial olivary nucleus
nTPM: 155.4
1962 Male, age 76, both hemispheres 185.8
1943 Male, age 61, both hemispheres 167.0
2138 Female, age 91, both hemispheres 139.4
2851 Male, age 80, both hemispheres 129.5
Medial parabrachial nucleus
nTPM: 117.4
2170 Female, age 91, both hemispheres 156.3
2463 Female, age 85, right hemisphere 125.5
2854 Male, age 80, both hemispheres 117.2
2786 Male, age 76, both hemispheres 104.3
2156 Male, age 61, both hemispheres 83.9
Medial periolivary nuclei
nTPM: 118.6
2791 Male, age 74, right hemisphere 141.5
2063 Male, age 76, both hemispheres 133.2
2081 Male, age 80, both hemispheres 122.5
2458 Female, age 91, both hemispheres 100.8
2171 Female, age 85, both hemispheres 95.2
Medial vestibular nucleus
nTPM: 118.8
2801 Male, age 74, both hemispheres 142.9
2803 Female, age 91, both hemispheres 129.6
2093 Male, age 80, both hemispheres 125.5
2624 Male, age 61, both hemispheres 116.3
2743 Female, age 85, both hemispheres 103.7
2134 Male, age 76, both hemispheres 95.1
Motor facial nucleus
nTPM: 113.6
2365 Male, age 74, right hemisphere 140.3
2126 Male, age 61, both hemispheres 122.4
2062 Male, age 76, both hemispheres 119.7
2697 Female, age 85, both hemispheres 105.3
2795 Female, age 91, both hemispheres 103.9
2327 Male, age 80, both hemispheres 90.3
Motor hypoglossal nucleus
nTPM: 116.1
2125 Female, age 91, both hemispheres 150.0
2132 Female, age 85, both hemispheres 138.1
2182 Male, age 80, both hemispheres 134.8
2461 Male, age 61, both hemispheres 91.1
2277 Male, age 76, both hemispheres 66.6
Motor trigeminal nucleus
nTPM: 104.8
2560 Male, age 74, both hemispheres 121.0
2309 Male, age 76, both hemispheres 106.8
2321 Female, age 91, both hemispheres 102.6
2335 Male, age 61, both hemispheres 96.9
2079 Male, age 80, both hemispheres 96.8
Nuclei of the trapezoid body
nTPM: 108.9
2159 Male, age 61, both hemispheres 120.1
1983 Male, age 76, both hemispheres 118.6
2166 Male, age 80, both hemispheres 107.6
2368 Female, age 91, both hemispheres 102.2
2735 Female, age 85, both hemispheres 95.8
Nucleus ambiguus
nTPM: 120.3
2071 Male, age 76, both hemispheres 164.1
2096 Female, age 85, both hemispheres 76.6
Nucleus cuneatus
nTPM: 118.5
2380 Male, age 80, both hemispheres 165.0
2381 Male, age 80, both hemispheres 138.1
2808 Female, age 85, both hemispheres 128.9
2376 Male, age 61, both hemispheres 124.8
2564 Male, age 74, both hemispheres 121.6
2100 Male, age 76, both hemispheres 107.3
2131 Male, age 76, both hemispheres 105.3
2562 Male, age 61, both hemispheres 91.6
2805 Female, age 91, both hemispheres 83.7
Nucleus gracilis
nTPM: 142.1
2382 Male, age 80, both hemispheres 172.2
2627 Male, age 74, both hemispheres 140.7
2299 Female, age 85, both hemispheres 113.4
Nucleus raphe magnus
nTPM: 108.4
2051 Male, age 76, both hemispheres 118.6
2455 Male, age 74, both hemispheres 117.4
2160 Male, age 61, both hemispheres 113.2
2459 Female, age 91, both hemispheres 109.6
2328 Male, age 80, both hemispheres 107.7
2172 Female, age 85, both hemispheres 83.9
Nucleus raphe obscurus
nTPM: 155.7
2845 Female, age 85, midline 168.3
2142 Male, age 76, midline 161.8
2800 Male, age 61, midline 136.9
Nucleus raphe pallidus
nTPM: 158.5
2145 Male, age 76, midline 170.0
1924 Male, age 61, midline 162.9
2183 Male, age 80, midline 142.5
Nucleus tractus solitarii
nTPM: 82.1
2144 Female, age 91, right hemisphere 103.6
2656 Male, age 76, both hemispheres 90.4
2191 Female, age 85, both hemispheres 71.6
2307 Male, age 80, both hemispheres 62.6
Paramedian reticular nucleus
nTPM: 128.3
2057 Male, age 80, both hemispheres 139.7
2313 Male, age 61, both hemispheres 126.7
2052 Male, age 76, both hemispheres 126.5
2050 Female, age 85, both hemispheres 120.2
Parvicellular reticular nuclei
nTPM: 118.7
2119 Male, age 80, both hemispheres 132.9
2095 Male, age 76, both hemispheres 126.6
2558 Male, age 74, both hemispheres 96.8
Parvicellular reticular nuclei, medullary
nTPM: 114.5
2189 Female, age 91, both hemispheres 120.5
2091 Female, age 85, both hemispheres 115.8
2181 Male, age 80, left hemisphere 107.1
Pedunculopontine tegmental nucleus
nTPM: 111.1
2334 Male, age 80, both hemispheres 119.2
1921 Female, age 85, both hemispheres 108.5
2338 Male, age 61, both hemispheres 105.6
Peritrigeminal nucleus
nTPM: 132.4
2067 Female, age 85, both hemispheres 140.4
2136 Male, age 76, both hemispheres 133.9
2179 Male, age 61, both hemispheres 123.1
Pontine nuclei
nTPM: 132.3
2454 Male, age 74, left hemisphere 171.6
1863 Male, age 55, unknown 149.2
2109 Female, age 72, unknown 149.2
2319 Female, age 91, both hemispheres 134.5
2727 Male, age 61, right hemisphere 126.0
1968 Male, age 76, left hemisphere 119.4
2115 Male, age 80, left hemisphere 104.6
2787 Female, age 85, both hemispheres 103.6
Pontine raphe nucleus
nTPM: 97.7
2122 Female, age 85, midline 102.8
2853 Male, age 76, midline 92.6
Posteroventral cochlear nucleus
nTPM: 128.4
2341 Male, age 80, both hemispheres 145.6
2135 Female, age 91, both hemispheres 143.4
2070 Male, age 76, both hemispheres 130.7
2752 Female, age 85, both hemispheres 112.8
2371 Male, age 61, both hemispheres 109.6
Prepositus hypoglossal nucleus
nTPM: 124.5
2855 Female, age 85, right hemisphere 148.3
2086 Male, age 80, both hemispheres 100.7
Principal sensory trigeminal nucleus
nTPM: 107.5
2367 Female, age 91, left hemisphere 124.2
2158 Male, age 61, both hemispheres 105.6
2008 Male, age 80, left hemisphere 100.8
2324 Male, age 76, both hemispheres 99.4
Reticular pontine nucleus, caudal
nTPM: 122.8
2559 Male, age 74, both hemispheres 149.4
2092 Male, age 76, both hemispheres 131.5
2457 Female, age 91, both hemispheres 124.6
2332 Male, age 80, right hemisphere 85.8
Reticular pontine nucleus, oral
nTPM: 127.5
2012 Female, age 85, both hemispheres 132.3
2361 Male, age 74, both hemispheres 130.5
1939 Male, age 80, both hemispheres 127.6
2366 Female, age 91, both hemispheres 125.9
2167 Male, age 76, both hemispheres 121.2
Reticulotegmental nucleus
nTPM: 104.1
2322 Female, age 91, both hemispheres 112.1
2452 Male, age 74, both hemispheres 108.0
2333 Male, age 80, both hemispheres 101.7
2325 Male, age 76, both hemispheres 94.6
Spinal trigeminal nucleus, caudal
nTPM: 119.6
2312 Male, age 61, both hemispheres 135.4
2308 Male, age 80, both hemispheres 126.3
2447 Male, age 76, both hemispheres 119.3
2390 Female, age 91, both hemispheres 118.5
2642 Male, age 74, both hemispheres 98.7
Spinal trigeminal nucleus, interpolar
nTPM: 119.2
2386 Female, age 85, both hemispheres 124.5
2625 Male, age 61, both hemispheres 124.0
2066 Male, age 76, right hemisphere 122.8
2033 Male, age 80, both hemispheres 119.0
2389 Female, age 91, both hemispheres 105.8
Spinal trigeminal nucleus, oral
nTPM: 106.4
1978 Male, age 76, both hemispheres 109.9
2164 Male, age 80, both hemispheres 109.7
2737 Female, age 85, both hemispheres 99.4
Spinal vestibular nucleus
nTPM: 124.2
2748 Male, age 76, both hemispheres 138.7
2384 Male, age 74, both hemispheres 127.9
2186 Female, age 91, both hemispheres 127.7
2806 Female, age 85, both hemispheres 127.2
2780 Male, age 80, both hemispheres 119.7
2796 Male, age 61, both hemispheres 104.2
Subcoeruleus area
nTPM: 116.2
2369 Female, age 85, left hemisphere 176.7
1958 Male, age 80, both hemispheres 113.1
2089 Male, age 76, left hemisphere 102.1
2323 Female, age 91, left hemisphere 96.2
2451 Male, age 74, both hemispheres 92.8
Superior olive
nTPM: 121.0
2364 Male, age 74, right hemisphere 150.6
2020 Male, age 76, both hemispheres 136.2
1875 Female, age 85, both hemispheres 115.4
2329 Male, age 80, right hemisphere 104.1
2561 Female, age 91, both hemispheres 98.7
Superior vestibular nucleus
nTPM: 111.5
2015 Male, age 80, both hemispheres 123.4
2383 Male, age 74, both hemispheres 107.4
2061 Male, age 76, both hemispheres 103.7
Ventral medullary reticular nucleus
nTPM: 132.2
2372 Male, age 61, both hemispheres 136.2
2060 Male, age 76, both hemispheres 128.2
Ventral periolivary nuclei
nTPM: 107.5
2023 Male, age 76, both hemispheres 135.6
2165 Male, age 80, both hemispheres 107.6
2130 Female, age 85, both hemispheres 105.7
2794 Female, age 91, left hemisphere 81.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 129.1
2118 Male, age 80, both hemispheres 140.8
2180 Male, age 61, both hemispheres 140.1
1986 Male, age 76, both hemispheres 130.9
2741 Female, age 85, both hemispheres 127.5
2302 Female, age 91, both hemispheres 106.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 117.5
2840 Female, age 85, both hemispheres 122.5
2359 Male, age 61, both hemispheres 120.2
2161 Male, age 80, both hemispheres 117.4
2449 Male, age 74, both hemispheres 117.1
1959 Male, age 76, both hemispheres 114.1
2456 Female, age 91, both hemispheres 114.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 289.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 239.4
FF:10182-103D2 60 years, female 275.6
FF:10165-103B3 76 years, female 203.1
Medulla oblongata
Scaled Tags Per Million: 234.2
FF:10038-101F2 18-64 years, mixed 287.1
FF:10174-103C3 60 years, female 224.1
FF:10155-103A2 76 years, female 191.3
Pons
Scaled Tags Per Million: 289.1
FF:10033-101E6 18-54 years, mixed 289.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 293.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 293.0
Samples: 4

Max nTPM: 323.8
Min nTPM: 245.4
Sample A Female 323.8
Sample B Female 245.4
Sample C Male 281.5
Sample D Male 321.4
Pons
nTPM: 258.1
Samples: 4

Max nTPM: 276.2
Min nTPM: 226.4
Sample A Female 264.3
Sample B Female 226.4
Sample C Male 265.3
Sample D Male 276.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 92.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 92.8
Samples: 4

Max nTPM: 97.9
Min nTPM: 86.0
Sample A Male 93.9
Sample B Male 97.9
Sample C Female 86.0
Sample D Female 93.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 9.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.5
72081482 Antisense, RP_051017_01_C07, Mouse strain C57BL/6J (56 days, male) 12.3
68546500 Antisense, RP_050120_02_F02, Mouse strain C57BL/6J (56 days, male) 6.8
Pons
Expression energy: 9.8
72081482 Antisense, RP_051017_01_C07, Mouse strain C57BL/6J (56 days, male) 12.7
68546500 Antisense, RP_050120_02_F02, Mouse strain C57BL/6J (56 days, male) 7.0

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