PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		2.460
Mouse brain, Intensity
Ponsi 		1.820
RNA expressioni
HPA Brain:36.2 nTPM
FANTOM5:58.5 Scaled Tags Per Million
Pig:24.7 nTPM
Mouse:24.3 nTPM
Allen mouse:0.2 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA076019
Medulla oblongata mean intensity 2.460
intensityi
FRONT BACK
Nucleus of the solitary tract 0.073
Raphe magnus nucleus 0.001
Cochlear nucleus 1.039
Lateral paragigantocellular nucleus 0.565
Raphe pallidus nucleus 2.460
Facial nucleus 0.350
Hypoglossal nucleus 2.359
Ambiguus nucleus 0.231
External cuneate nucleus 0.793
Inferior olivary nucleus 0.097
Raphe obscures nucleus 0.003
Dorsal motor nucleus of vagus 1.269
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 0.208
Parabrachial nucleus 0.037
Principle sensory trigeminal nucleus 0.111
Locus coeruleus 1.820
Pontine nucleus 1.066
Vestibular nucleus 0.528
Pontine reticular nucleus, oral 0.081
Lateral lemniscus 0.066
Superior paraolivary nucleus 0.119

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 36.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 30.8
1984 Male, age 76, both hemispheres 43.1
2188 Female, age 91, both hemispheres 28.9
2301 Female, age 85, both hemispheres 26.0
2090 Male, age 80, both hemispheres 25.1
Area postrema
nTPM: 21.7
2306 Male, age 80, both hemispheres 27.0
2054 Male, age 76, both hemispheres 24.1
2799 Male, age 61, both hemispheres 13.9
Dorsal cochlear nucleus
nTPM: 27.5
2370 Male, age 61, both hemispheres 32.5
2802 Male, age 74, right hemisphere 26.9
2187 Female, age 91, both hemispheres 26.4
2058 Male, age 76, both hemispheres 26.3
2378 Male, age 80, both hemispheres 25.7
Dorsal medullary reticular nucleus
nTPM: 29.2
2088 Male, age 76, both hemispheres 30.8
2040 Female, age 85, both hemispheres 29.4
2373 Male, age 61, both hemispheres 27.5
Dorsal motor vagal complex
nTPM: 26.7
2844 Male, age 55, unknown 29.5
2643 Male, age 74, both hemispheres 29.4
2185 Male, age 76, both hemispheres 28.6
2807 Female, age 85, both hemispheres 27.3
2000 Male, age 74, unknown 25.2
2797 Male, age 61, both hemispheres 24.9
2133 Female, age 91, both hemispheres 24.8
2813 Female, age 72, unknown 23.8
Dorsal tegmental nucleus
nTPM: 24.7
1936 Male, age 76, left hemisphere 27.2
2083 Male, age 80, both hemispheres 26.0
2326 Male, age 74, both hemispheres 23.4
2358 Male, age 61, both hemispheres 22.1
Dorsolateral tegmental area
nTPM: 25.0
2141 Male, age 76, both hemispheres 26.8
2654 Male, age 80, both hemispheres 26.1
2751 Female, age 85, both hemispheres 26.0
2360 Male, age 74, both hemispheres 24.6
2337 Male, age 61, both hemispheres 21.3
Gigantocellular reticular nuclei, medullary
nTPM: 29.1
2462 Male, age 74, both hemispheres 33.8
2310 Male, age 80, both hemispheres 33.0
2022 Male, age 76, right hemisphere 29.2
2387 Female, age 91, both hemispheres 27.5
1876 Female, age 85, both hemispheres 26.9
2314 Male, age 61, both hemispheres 24.6
Gigantocellular reticular nuclei, pars
nTPM: 32.3
2168 Male, age 76, both hemispheres 41.6
2706 Male, age 80, both hemispheres 32.3
2084 Female, age 85, both hemispheres 30.3
2330 Male, age 80, both hemispheres 28.8
2336 Male, age 61, both hemispheres 28.2
Inferior olive
nTPM: 24.8
2628 Female, age 91, both hemispheres 28.7
2085 Female, age 85, both hemispheres 25.0
2379 Male, age 80, both hemispheres 24.9
2563 Male, age 74, both hemispheres 23.6
2178 Male, age 61, both hemispheres 21.7
Kolliker-Fuse nucleus
nTPM: 28.0
2793 Female, age 91, left hemisphere 33.8
2163 Male, age 80, both hemispheres 28.8
2315 Male, age 76, right hemisphere 21.3
Lateral lemniscal nuclei
nTPM: 34.8
2169 Male, age 76, both hemispheres 37.7
2036 Male, age 80, both hemispheres 36.2
2320 Female, age 91, left hemisphere 35.5
2746 Female, age 85, left hemisphere 32.2
2453 Male, age 74, right hemisphere 32.1
Lateral medullary reticular nucleus
nTPM: 27.1
2804 Female, age 91, both hemispheres 29.4
2044 Male, age 76, both hemispheres 29.2
2852 Male, age 80, both hemispheres 28.0
2305 Male, age 74, both hemispheres 25.9
2190 Female, age 85, both hemispheres 25.8
2374 Male, age 61, both hemispheres 24.0
Lateral parabrachial nucleus
nTPM: 27.1
2139 Female, age 85, right hemisphere 30.3
2790 Male, age 61, both hemispheres 27.8
2013 Male, age 80, both hemispheres 27.5
2792 Male, age 76, both hemispheres 22.8
Lateral vestibular nucleus
nTPM: 30.8
2184 Male, age 76, both hemispheres 33.9
2311 Male, age 80, both hemispheres 27.7
Locus coeruleus
nTPM: 26.7
2162 Male, age 80, both hemispheres 30.3
2317 Female, age 72, unknown 30.3
2014 Male, age 55, unknown 27.9
1980 Male, age 76, both hemispheres 26.4
2720 Male, age 74, both hemispheres 25.1
2123 Female, age 91, both hemispheres 24.1
2788 Male, age 74, unknown 22.7
Medial olivary nucleus
nTPM: 22.3
2851 Male, age 80, both hemispheres 27.5
1962 Male, age 76, both hemispheres 20.9
2138 Female, age 91, both hemispheres 20.6
1943 Male, age 61, both hemispheres 20.4
Medial parabrachial nucleus
nTPM: 28.4
2463 Female, age 85, right hemisphere 31.1
2786 Male, age 76, both hemispheres 28.5
2156 Male, age 61, both hemispheres 28.4
2170 Female, age 91, both hemispheres 27.7
2854 Male, age 80, both hemispheres 26.2
Medial periolivary nuclei
nTPM: 31.7
2063 Male, age 76, both hemispheres 40.6
2171 Female, age 85, both hemispheres 32.2
2458 Female, age 91, both hemispheres 29.7
2081 Male, age 80, both hemispheres 28.1
2791 Male, age 74, right hemisphere 27.9
Medial vestibular nucleus
nTPM: 28.7
2624 Male, age 61, both hemispheres 33.5
2134 Male, age 76, both hemispheres 31.2
2743 Female, age 85, both hemispheres 28.1
2093 Male, age 80, both hemispheres 27.5
2803 Female, age 91, both hemispheres 26.9
2801 Male, age 74, both hemispheres 24.9
Motor facial nucleus
nTPM: 33.2
2062 Male, age 76, both hemispheres 41.1
2327 Male, age 80, both hemispheres 34.0
2795 Female, age 91, both hemispheres 32.4
2697 Female, age 85, both hemispheres 30.8
2126 Male, age 61, both hemispheres 30.5
2365 Male, age 74, right hemisphere 30.3
Motor hypoglossal nucleus
nTPM: 28.1
2182 Male, age 80, both hemispheres 29.4
2125 Female, age 91, both hemispheres 29.3
2277 Male, age 76, both hemispheres 27.8
2461 Male, age 61, both hemispheres 27.6
2132 Female, age 85, both hemispheres 26.6
Motor trigeminal nucleus
nTPM: 31.5
2560 Male, age 74, both hemispheres 37.7
2079 Male, age 80, both hemispheres 30.8
2335 Male, age 61, both hemispheres 30.4
2321 Female, age 91, both hemispheres 30.1
2309 Male, age 76, both hemispheres 28.4
Nuclei of the trapezoid body
nTPM: 36.2
2159 Male, age 61, both hemispheres 39.2
1983 Male, age 76, both hemispheres 38.6
2735 Female, age 85, both hemispheres 36.0
2166 Male, age 80, both hemispheres 34.7
2368 Female, age 91, both hemispheres 32.7
Nucleus ambiguus
nTPM: 30.1
2096 Female, age 85, both hemispheres 39.0
2071 Male, age 76, both hemispheres 21.2
Nucleus cuneatus
nTPM: 29.1
2100 Male, age 76, both hemispheres 33.3
2131 Male, age 76, both hemispheres 32.2
2805 Female, age 91, both hemispheres 32.1
2562 Male, age 61, both hemispheres 30.9
2564 Male, age 74, both hemispheres 28.1
2381 Male, age 80, both hemispheres 27.9
2376 Male, age 61, both hemispheres 27.5
2380 Male, age 80, both hemispheres 25.3
2808 Female, age 85, both hemispheres 25.0
Nucleus gracilis
nTPM: 25.6
2382 Male, age 80, both hemispheres 27.4
2299 Female, age 85, both hemispheres 26.4
2627 Male, age 74, both hemispheres 23.0
Nucleus raphe magnus
nTPM: 35.5
2160 Male, age 61, both hemispheres 42.1
2051 Male, age 76, both hemispheres 35.8
2328 Male, age 80, both hemispheres 35.1
2172 Female, age 85, both hemispheres 34.7
2459 Female, age 91, both hemispheres 32.8
2455 Male, age 74, both hemispheres 32.4
Nucleus raphe obscurus
nTPM: 25.2
2845 Female, age 85, midline 27.0
2142 Male, age 76, midline 25.0
2800 Male, age 61, midline 23.5
Nucleus raphe pallidus
nTPM: 22.3
2183 Male, age 80, midline 28.0
2145 Male, age 76, midline 21.1
1924 Male, age 61, midline 17.7
Nucleus tractus solitarii
nTPM: 25.4
2307 Male, age 80, both hemispheres 30.8
2656 Male, age 76, both hemispheres 29.2
2191 Female, age 85, both hemispheres 26.3
2144 Female, age 91, right hemisphere 15.3
Paramedian reticular nucleus
nTPM: 28.0
2313 Male, age 61, both hemispheres 32.2
2057 Male, age 80, both hemispheres 28.4
2050 Female, age 85, both hemispheres 28.2
2052 Male, age 76, both hemispheres 23.2
Parvicellular reticular nuclei
nTPM: 29.8
2558 Male, age 74, both hemispheres 37.9
2095 Male, age 76, both hemispheres 26.4
2119 Male, age 80, both hemispheres 25.0
Parvicellular reticular nuclei, medullary
nTPM: 28.3
2189 Female, age 91, both hemispheres 28.6
2091 Female, age 85, both hemispheres 28.3
2181 Male, age 80, left hemisphere 28.0
Pedunculopontine tegmental nucleus
nTPM: 26.6
1921 Female, age 85, both hemispheres 32.2
2334 Male, age 80, both hemispheres 24.7
2338 Male, age 61, both hemispheres 22.9
Peritrigeminal nucleus
nTPM: 27.8
2179 Male, age 61, both hemispheres 33.0
2136 Male, age 76, both hemispheres 26.3
2067 Female, age 85, both hemispheres 24.2
Pontine nuclei
nTPM: 36.0
1968 Male, age 76, left hemisphere 39.9
2787 Female, age 85, both hemispheres 39.0
1863 Male, age 55, unknown 38.6
2727 Male, age 61, right hemisphere 37.5
2109 Female, age 72, unknown 36.1
2115 Male, age 80, left hemisphere 33.5
2319 Female, age 91, both hemispheres 31.8
2454 Male, age 74, left hemisphere 31.4
Pontine raphe nucleus
nTPM: 26.4
2122 Female, age 85, midline 26.5
2853 Male, age 76, midline 26.3
Posteroventral cochlear nucleus
nTPM: 28.5
2371 Male, age 61, both hemispheres 30.7
2070 Male, age 76, both hemispheres 29.8
2135 Female, age 91, both hemispheres 28.6
2752 Female, age 85, both hemispheres 28.1
2341 Male, age 80, both hemispheres 25.2
Prepositus hypoglossal nucleus
nTPM: 26.1
2086 Male, age 80, both hemispheres 28.5
2855 Female, age 85, right hemisphere 23.6
Principal sensory trigeminal nucleus
nTPM: 35.2
2158 Male, age 61, both hemispheres 44.7
2008 Male, age 80, left hemisphere 33.7
2324 Male, age 76, both hemispheres 31.2
2367 Female, age 91, left hemisphere 31.2
Reticular pontine nucleus, caudal
nTPM: 33.9
2332 Male, age 80, right hemisphere 40.9
2457 Female, age 91, both hemispheres 35.3
2092 Male, age 76, both hemispheres 32.1
2559 Male, age 74, both hemispheres 27.1
Reticular pontine nucleus, oral
nTPM: 28.2
2366 Female, age 91, both hemispheres 31.6
2012 Female, age 85, both hemispheres 28.5
2361 Male, age 74, both hemispheres 27.8
2167 Male, age 76, both hemispheres 27.0
1939 Male, age 80, both hemispheres 26.2
Reticulotegmental nucleus
nTPM: 30.4
2325 Male, age 76, both hemispheres 32.1
2452 Male, age 74, both hemispheres 30.5
2333 Male, age 80, both hemispheres 30.4
2322 Female, age 91, both hemispheres 28.6
Spinal trigeminal nucleus, caudal
nTPM: 29.6
2447 Male, age 76, both hemispheres 32.7
2308 Male, age 80, both hemispheres 31.4
2642 Male, age 74, both hemispheres 29.2
2312 Male, age 61, both hemispheres 28.0
2390 Female, age 91, both hemispheres 26.6
Spinal trigeminal nucleus, interpolar
nTPM: 30.0
2625 Male, age 61, both hemispheres 33.9
2066 Male, age 76, right hemisphere 32.6
2389 Female, age 91, both hemispheres 30.4
2033 Male, age 80, both hemispheres 27.2
2386 Female, age 85, both hemispheres 26.0
Spinal trigeminal nucleus, oral
nTPM: 30.9
2737 Female, age 85, both hemispheres 32.8
1978 Male, age 76, both hemispheres 30.1
2164 Male, age 80, both hemispheres 29.7
Spinal vestibular nucleus
nTPM: 28.0
2780 Male, age 80, both hemispheres 30.7
2796 Male, age 61, both hemispheres 28.2
2186 Female, age 91, both hemispheres 27.7
2748 Male, age 76, both hemispheres 27.6
2806 Female, age 85, both hemispheres 27.0
2384 Male, age 74, both hemispheres 26.5
Subcoeruleus area
nTPM: 29.5
2089 Male, age 76, left hemisphere 34.5
2323 Female, age 91, left hemisphere 29.7
2451 Male, age 74, both hemispheres 28.6
1958 Male, age 80, both hemispheres 27.9
2369 Female, age 85, left hemisphere 26.7
Superior olive
nTPM: 32.5
2329 Male, age 80, right hemisphere 35.6
2561 Female, age 91, both hemispheres 34.6
1875 Female, age 85, both hemispheres 32.5
2020 Male, age 76, both hemispheres 31.9
2364 Male, age 74, right hemisphere 27.9
Superior vestibular nucleus
nTPM: 23.6
2061 Male, age 76, both hemispheres 26.4
2015 Male, age 80, both hemispheres 24.6
2383 Male, age 74, both hemispheres 19.8
Ventral medullary reticular nucleus
nTPM: 25.4
2060 Male, age 76, both hemispheres 27.4
2372 Male, age 61, both hemispheres 23.5
Ventral periolivary nuclei
nTPM: 32.4
2165 Male, age 80, both hemispheres 34.4
2794 Female, age 91, left hemisphere 32.8
2023 Male, age 76, both hemispheres 31.3
2130 Female, age 85, both hemispheres 31.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 26.9
2118 Male, age 80, both hemispheres 28.5
2741 Female, age 85, both hemispheres 27.4
2302 Female, age 91, both hemispheres 27.0
1986 Male, age 76, both hemispheres 26.5
2180 Male, age 61, both hemispheres 25.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 30.2
1959 Male, age 76, both hemispheres 33.6
2456 Female, age 91, both hemispheres 32.6
2161 Male, age 80, both hemispheres 31.2
2449 Male, age 74, both hemispheres 30.8
2359 Male, age 61, both hemispheres 27.0
2840 Female, age 85, both hemispheres 25.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 58.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 58.5
FF:10165-103B3 76 years, female 67.5
FF:10182-103D2 60 years, female 49.5
Medulla oblongata
Scaled Tags Per Million: 55.5
FF:10155-103A2 76 years, female 66.9
FF:10174-103C3 60 years, female 61.0
FF:10038-101F2 18-64 years, mixed 38.4
Pons
Scaled Tags Per Million: 52.8
FF:10033-101E6 18-54 years, mixed 52.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 24.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 19.4
Samples: 4

Max nTPM: 22.1
Min nTPM: 15.8
Sample A Female 21.2
Sample B Female 22.1
Sample C Male 18.5
Sample D Male 15.8
Pons
nTPM: 24.7
Samples: 4

Max nTPM: 33.6
Min nTPM: 21.0
Sample A Female 33.6
Sample B Female 23.1
Sample C Male 21.1
Sample D Male 21.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 24.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 24.3
Samples: 4

Max nTPM: 24.6
Min nTPM: 24.0
Sample A Male 24.0
Sample B Male 24.6
Sample C Female 24.4
Sample D Female 24.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.2
72000164 Antisense, RP_050915_02_C10, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 0.0
72000164 Antisense, RP_050915_02_C10, Mouse strain C57BL/6J (56 days, male) 0.0

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