PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:90.5 nTPM
FANTOM5:54.3 Scaled Tags Per Million
Pig:56.1 nTPM
Mouse:13.3 nTPM
Allen mouse:0.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 90.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 70.0
2090 Male, age 80, both hemispheres 83.8
2188 Female, age 91, both hemispheres 82.9
2301 Female, age 85, both hemispheres 75.9
1984 Male, age 76, both hemispheres 37.7
Area postrema
nTPM: 69.0
2306 Male, age 80, both hemispheres 81.0
2799 Male, age 61, both hemispheres 75.2
2054 Male, age 76, both hemispheres 50.6
Dorsal cochlear nucleus
nTPM: 62.9
2378 Male, age 80, both hemispheres 68.4
2187 Female, age 91, both hemispheres 64.9
2370 Male, age 61, both hemispheres 63.1
2802 Male, age 74, right hemisphere 61.8
2058 Male, age 76, both hemispheres 56.3
Dorsal medullary reticular nucleus
nTPM: 69.5
2373 Male, age 61, both hemispheres 79.5
2088 Male, age 76, both hemispheres 74.2
2040 Female, age 85, both hemispheres 54.7
Dorsal motor vagal complex
nTPM: 58.4
2185 Male, age 76, both hemispheres 80.7
2643 Male, age 74, both hemispheres 68.9
2797 Male, age 61, both hemispheres 65.8
2844 Male, age 55, unknown 56.3
2807 Female, age 85, both hemispheres 55.9
2813 Female, age 72, unknown 50.2
2133 Female, age 91, both hemispheres 45.8
2000 Male, age 74, unknown 43.9
Dorsal tegmental nucleus
nTPM: 60.2
2083 Male, age 80, both hemispheres 68.4
2358 Male, age 61, both hemispheres 59.7
2326 Male, age 74, both hemispheres 57.2
1936 Male, age 76, left hemisphere 55.4
Dorsolateral tegmental area
nTPM: 67.4
2337 Male, age 61, both hemispheres 98.6
2751 Female, age 85, both hemispheres 76.6
2654 Male, age 80, both hemispheres 68.7
2360 Male, age 74, both hemispheres 52.6
2141 Male, age 76, both hemispheres 40.5
Gigantocellular reticular nuclei, medullary
nTPM: 68.7
2314 Male, age 61, both hemispheres 94.0
2022 Male, age 76, right hemisphere 70.9
2387 Female, age 91, both hemispheres 68.5
1876 Female, age 85, both hemispheres 67.7
2310 Male, age 80, both hemispheres 64.5
2462 Male, age 74, both hemispheres 46.4
Gigantocellular reticular nuclei, pars
nTPM: 63.9
2706 Male, age 80, both hemispheres 72.8
2330 Male, age 80, both hemispheres 72.0
2336 Male, age 61, both hemispheres 70.5
2084 Female, age 85, both hemispheres 53.3
2168 Male, age 76, both hemispheres 50.7
Inferior olive
nTPM: 62.9
2178 Male, age 61, both hemispheres 88.5
2628 Female, age 91, both hemispheres 63.9
2379 Male, age 80, both hemispheres 60.5
2563 Male, age 74, both hemispheres 51.9
2085 Female, age 85, both hemispheres 49.9
Kolliker-Fuse nucleus
nTPM: 63.1
2793 Female, age 91, left hemisphere 89.7
2163 Male, age 80, both hemispheres 61.9
2315 Male, age 76, right hemisphere 37.7
Lateral lemniscal nuclei
nTPM: 66.4
2320 Female, age 91, left hemisphere 79.8
2036 Male, age 80, both hemispheres 79.2
2746 Female, age 85, left hemisphere 62.2
2453 Male, age 74, right hemisphere 56.0
2169 Male, age 76, both hemispheres 54.9
Lateral medullary reticular nucleus
nTPM: 70.2
2852 Male, age 80, both hemispheres 95.9
2374 Male, age 61, both hemispheres 83.2
2044 Male, age 76, both hemispheres 67.8
2190 Female, age 85, both hemispheres 64.0
2305 Male, age 74, both hemispheres 62.0
2804 Female, age 91, both hemispheres 48.1
Lateral parabrachial nucleus
nTPM: 73.2
2792 Male, age 76, both hemispheres 102.3
2790 Male, age 61, both hemispheres 77.0
2013 Male, age 80, both hemispheres 74.2
2139 Female, age 85, right hemisphere 39.4
Lateral vestibular nucleus
nTPM: 67.1
2184 Male, age 76, both hemispheres 69.4
2311 Male, age 80, both hemispheres 64.8
Locus coeruleus
nTPM: 37.1
2162 Male, age 80, both hemispheres 46.4
2720 Male, age 74, both hemispheres 44.4
2123 Female, age 91, both hemispheres 37.7
2317 Female, age 72, unknown 35.5
2014 Male, age 55, unknown 32.7
2788 Male, age 74, unknown 31.6
1980 Male, age 76, both hemispheres 31.3
Medial olivary nucleus
nTPM: 80.8
1943 Male, age 61, both hemispheres 108.3
2851 Male, age 80, both hemispheres 78.0
1962 Male, age 76, both hemispheres 76.9
2138 Female, age 91, both hemispheres 60.1
Medial parabrachial nucleus
nTPM: 69.4
2786 Male, age 76, both hemispheres 75.1
2170 Female, age 91, both hemispheres 73.2
2854 Male, age 80, both hemispheres 69.5
2463 Female, age 85, right hemisphere 68.9
2156 Male, age 61, both hemispheres 60.4
Medial periolivary nuclei
nTPM: 58.5
2081 Male, age 80, both hemispheres 86.3
2458 Female, age 91, both hemispheres 74.4
2791 Male, age 74, right hemisphere 53.3
2171 Female, age 85, both hemispheres 39.7
2063 Male, age 76, both hemispheres 39.0
Medial vestibular nucleus
nTPM: 54.7
2093 Male, age 80, both hemispheres 62.7
2801 Male, age 74, both hemispheres 62.4
2624 Male, age 61, both hemispheres 61.0
2803 Female, age 91, both hemispheres 59.2
2743 Female, age 85, both hemispheres 50.8
2134 Male, age 76, both hemispheres 32.2
Motor facial nucleus
nTPM: 59.8
2697 Female, age 85, both hemispheres 77.6
2126 Male, age 61, both hemispheres 75.3
2327 Male, age 80, both hemispheres 59.0
2365 Male, age 74, right hemisphere 55.0
2795 Female, age 91, both hemispheres 53.7
2062 Male, age 76, both hemispheres 38.4
Motor hypoglossal nucleus
nTPM: 59.7
2182 Male, age 80, both hemispheres 79.7
2125 Female, age 91, both hemispheres 60.2
2132 Female, age 85, both hemispheres 58.4
2461 Male, age 61, both hemispheres 51.6
2277 Male, age 76, both hemispheres 48.9
Motor trigeminal nucleus
nTPM: 72.6
2309 Male, age 76, both hemispheres 79.6
2321 Female, age 91, both hemispheres 76.1
2560 Male, age 74, both hemispheres 74.0
2079 Male, age 80, both hemispheres 68.5
2335 Male, age 61, both hemispheres 64.8
Nuclei of the trapezoid body
nTPM: 50.1
2166 Male, age 80, both hemispheres 75.2
2368 Female, age 91, both hemispheres 55.1
2159 Male, age 61, both hemispheres 49.0
1983 Male, age 76, both hemispheres 38.3
2735 Female, age 85, both hemispheres 33.0
Nucleus ambiguus
nTPM: 68.1
2071 Male, age 76, both hemispheres 71.9
2096 Female, age 85, both hemispheres 64.3
Nucleus cuneatus
nTPM: 76.0
2380 Male, age 80, both hemispheres 91.3
2100 Male, age 76, both hemispheres 86.7
2376 Male, age 61, both hemispheres 83.5
2381 Male, age 80, both hemispheres 78.8
2808 Female, age 85, both hemispheres 74.0
2805 Female, age 91, both hemispheres 73.9
2131 Male, age 76, both hemispheres 68.2
2562 Male, age 61, both hemispheres 64.6
2564 Male, age 74, both hemispheres 62.9
Nucleus gracilis
nTPM: 81.6
2382 Male, age 80, both hemispheres 98.2
2299 Female, age 85, both hemispheres 81.0
2627 Male, age 74, both hemispheres 65.7
Nucleus raphe magnus
nTPM: 52.8
2459 Female, age 91, both hemispheres 71.3
2051 Male, age 76, both hemispheres 66.6
2328 Male, age 80, both hemispheres 65.8
2455 Male, age 74, both hemispheres 45.9
2172 Female, age 85, both hemispheres 36.7
2160 Male, age 61, both hemispheres 30.8
Nucleus raphe obscurus
nTPM: 90.5
2142 Male, age 76, midline 103.0
2800 Male, age 61, midline 93.0
2845 Female, age 85, midline 75.6
Nucleus raphe pallidus
nTPM: 81.3
1924 Male, age 61, midline 90.8
2145 Male, age 76, midline 82.3
2183 Male, age 80, midline 70.8
Nucleus tractus solitarii
nTPM: 52.7
2191 Female, age 85, both hemispheres 74.3
2307 Male, age 80, both hemispheres 56.6
2656 Male, age 76, both hemispheres 49.8
2144 Female, age 91, right hemisphere 29.8
Paramedian reticular nucleus
nTPM: 62.7
2052 Male, age 76, both hemispheres 80.5
2057 Male, age 80, both hemispheres 61.2
2050 Female, age 85, both hemispheres 60.4
2313 Male, age 61, both hemispheres 48.6
Parvicellular reticular nuclei
nTPM: 70.3
2095 Male, age 76, both hemispheres 77.8
2119 Male, age 80, both hemispheres 71.1
2558 Male, age 74, both hemispheres 61.8
Parvicellular reticular nuclei, medullary
nTPM: 54.5
2189 Female, age 91, both hemispheres 60.5
2181 Male, age 80, left hemisphere 52.7
2091 Female, age 85, both hemispheres 50.5
Pedunculopontine tegmental nucleus
nTPM: 63.1
2338 Male, age 61, both hemispheres 82.7
2334 Male, age 80, both hemispheres 60.8
1921 Female, age 85, both hemispheres 45.8
Peritrigeminal nucleus
nTPM: 61.4
2179 Male, age 61, both hemispheres 64.7
2136 Male, age 76, both hemispheres 60.6
2067 Female, age 85, both hemispheres 59.1
Pontine nuclei
nTPM: 68.5
2115 Male, age 80, left hemisphere 91.0
2319 Female, age 91, both hemispheres 83.0
2454 Male, age 74, left hemisphere 79.1
1968 Male, age 76, left hemisphere 70.6
2109 Female, age 72, unknown 65.2
2787 Female, age 85, both hemispheres 57.1
1863 Male, age 55, unknown 53.6
2727 Male, age 61, right hemisphere 48.7
Pontine raphe nucleus
nTPM: 49.0
2122 Female, age 85, midline 51.1
2853 Male, age 76, midline 47.0
Posteroventral cochlear nucleus
nTPM: 76.1
2135 Female, age 91, both hemispheres 97.1
2341 Male, age 80, both hemispheres 91.9
2070 Male, age 76, both hemispheres 79.2
2371 Male, age 61, both hemispheres 68.1
2752 Female, age 85, both hemispheres 44.2
Prepositus hypoglossal nucleus
nTPM: 50.9
2855 Female, age 85, right hemisphere 54.3
2086 Male, age 80, both hemispheres 47.5
Principal sensory trigeminal nucleus
nTPM: 58.6
2367 Female, age 91, left hemisphere 80.2
2324 Male, age 76, both hemispheres 60.2
2008 Male, age 80, left hemisphere 59.7
2158 Male, age 61, both hemispheres 34.5
Reticular pontine nucleus, caudal
nTPM: 69.8
2559 Male, age 74, both hemispheres 77.0
2457 Female, age 91, both hemispheres 73.6
2092 Male, age 76, both hemispheres 65.1
2332 Male, age 80, right hemisphere 63.3
Reticular pontine nucleus, oral
nTPM: 75.6
2366 Female, age 91, both hemispheres 87.9
2361 Male, age 74, both hemispheres 76.5
1939 Male, age 80, both hemispheres 75.6
2167 Male, age 76, both hemispheres 73.0
2012 Female, age 85, both hemispheres 64.8
Reticulotegmental nucleus
nTPM: 62.0
2452 Male, age 74, both hemispheres 69.3
2333 Male, age 80, both hemispheres 67.5
2322 Female, age 91, both hemispheres 66.9
2325 Male, age 76, both hemispheres 44.2
Spinal trigeminal nucleus, caudal
nTPM: 69.3
2312 Male, age 61, both hemispheres 91.1
2308 Male, age 80, both hemispheres 74.9
2642 Male, age 74, both hemispheres 67.6
2447 Male, age 76, both hemispheres 65.2
2390 Female, age 91, both hemispheres 47.8
Spinal trigeminal nucleus, interpolar
nTPM: 52.2
2389 Female, age 91, both hemispheres 60.5
2033 Male, age 80, both hemispheres 59.3
2386 Female, age 85, both hemispheres 56.8
2066 Male, age 76, right hemisphere 42.4
2625 Male, age 61, both hemispheres 42.1
Spinal trigeminal nucleus, oral
nTPM: 58.7
2164 Male, age 80, both hemispheres 73.4
1978 Male, age 76, both hemispheres 61.6
2737 Female, age 85, both hemispheres 41.1
Spinal vestibular nucleus
nTPM: 63.9
2748 Male, age 76, both hemispheres 83.9
2384 Male, age 74, both hemispheres 69.4
2186 Female, age 91, both hemispheres 60.1
2806 Female, age 85, both hemispheres 57.3
2780 Male, age 80, both hemispheres 57.1
2796 Male, age 61, both hemispheres 55.7
Subcoeruleus area
nTPM: 66.1
2369 Female, age 85, left hemisphere 86.9
2089 Male, age 76, left hemisphere 74.3
2451 Male, age 74, both hemispheres 59.9
1958 Male, age 80, both hemispheres 56.7
2323 Female, age 91, left hemisphere 52.4
Superior olive
nTPM: 67.7
2020 Male, age 76, both hemispheres 79.8
2329 Male, age 80, right hemisphere 73.8
2561 Female, age 91, both hemispheres 71.3
1875 Female, age 85, both hemispheres 57.3
2364 Male, age 74, right hemisphere 56.1
Superior vestibular nucleus
nTPM: 54.3
2383 Male, age 74, both hemispheres 58.6
2015 Male, age 80, both hemispheres 55.7
2061 Male, age 76, both hemispheres 48.5
Ventral medullary reticular nucleus
nTPM: 86.8
2060 Male, age 76, both hemispheres 88.9
2372 Male, age 61, both hemispheres 84.8
Ventral periolivary nuclei
nTPM: 58.9
2023 Male, age 76, both hemispheres 84.0
2794 Female, age 91, left hemisphere 60.4
2165 Male, age 80, both hemispheres 55.5
2130 Female, age 85, both hemispheres 35.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 64.2
2118 Male, age 80, both hemispheres 76.4
2180 Male, age 61, both hemispheres 71.9
1986 Male, age 76, both hemispheres 68.5
2302 Female, age 91, both hemispheres 52.2
2741 Female, age 85, both hemispheres 52.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 65.5
2456 Female, age 91, both hemispheres 77.7
2359 Male, age 61, both hemispheres 67.0
2840 Female, age 85, both hemispheres 65.4
2161 Male, age 80, both hemispheres 65.1
1959 Male, age 76, both hemispheres 63.7
2449 Male, age 74, both hemispheres 53.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 54.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 50.5
FF:10182-103D2 60 years, female 55.6
FF:10165-103B3 76 years, female 45.3
Medulla oblongata
Scaled Tags Per Million: 54.3
FF:10038-101F2 18-64 years, mixed 61.9
FF:10174-103C3 60 years, female 59.6
FF:10155-103A2 76 years, female 41.4
Pons
Scaled Tags Per Million: 51.0
FF:10033-101E6 18-54 years, mixed 51.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 56.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 56.1
Samples: 4

Max nTPM: 64.7
Min nTPM: 40.7
Sample A Female 62.6
Sample B Female 40.7
Sample C Male 56.2
Sample D Male 64.7
Pons
nTPM: 36.5
Samples: 4

Max nTPM: 43.7
Min nTPM: 31.5
Sample A Female 36.5
Sample B Female 31.5
Sample C Male 34.3
Sample D Male 43.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 13.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 13.3
Samples: 4

Max nTPM: 15.0
Min nTPM: 11.1
Sample A Male 15.0
Sample B Male 15.0
Sample C Female 11.9
Sample D Female 11.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.8
70743844 Antisense, RP_050610_01_A01, Mouse strain C57BL/6J (56 days, male) 1.2
67792189 Antisense, RP_040920_01_C07, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.8
70743844 Antisense, RP_050610_01_A01, Mouse strain C57BL/6J (56 days, male) 1.4
67792189 Antisense, RP_040920_01_C07, Mouse strain C57BL/6J (56 days, male) 0.3

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