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NDUFB10
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  • NDUFB10
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:184.6 nTPM
FANTOM5:215.0 Scaled Tags Per Million
Pig:139.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA073189
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 184.6
Samples: 246

Max nTPM: 407.2
Min nTPM: 92.2
Std nTPM: 48.7
Median nTPM: 178.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 407.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 369.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 352.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 341.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 331.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 329.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 317.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 307.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 290.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 284.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 283.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 277.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 276.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 273.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 270.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 269.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 265.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 257.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 257.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 256.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 253.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 247.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 247.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 244.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 243.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 242.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 241.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 239.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 239.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 238.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 233.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 233.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 231.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 229.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 229.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 227.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 227.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 225.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 225.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 224.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 220.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 220.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 218.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 217.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 217.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 216.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 215.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 214.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 214.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 213.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 213.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 212.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 212.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 212.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 212.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 211.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 210.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 210.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 209.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 209.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 209.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 208.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 207.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 207.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 206.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 205.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 205.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 202.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 200.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 199.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 198.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 198.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 198.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 198.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 197.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 197.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 196.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 195.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 194.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 192.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 192.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 191.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 191.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 191.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 191.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 190.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 190.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 190.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 189.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 189.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 189.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 188.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 188.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 188.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 187.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 187.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 187.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 186.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 186.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 186.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 186.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 186.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 186.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 186.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 185.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 185.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 184.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 184.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 184.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 182.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 182.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 182.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 182.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 182.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 182.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 182.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 182.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 180.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 180.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 179.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 178.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 178.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 178.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 178.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 177.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 177.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 177.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 176.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 176.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 176.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 176.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 175.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 175.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 174.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 174.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 173.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 173.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 173.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 173.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 172.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 172.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 171.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 171.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 170.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 169.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 169.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 168.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 167.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 167.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 166.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 166.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 166.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 166.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 165.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 165.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 163.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 163.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 163.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 162.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 162.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 162.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 161.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 160.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 160.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 160.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 160.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 160.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 159.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 159.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 158.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 158.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 158.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 157.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 157.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 157.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 156.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 156.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 156.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 155.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 155.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 155.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 154.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 152.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 152.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 151.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 151.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 150.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 149.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 149.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 148.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 148.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 147.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 147.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 147.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 147.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 147.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 146.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 145.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 145.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 145.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 145.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 145.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 144.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 144.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 143.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 143.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 142.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 140.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 139.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 139.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 138.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 137.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 137.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 137.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 137.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 137.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 137.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 136.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 136.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 135.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 135.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 134.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 133.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 133.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 133.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 132.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 130.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 128.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 127.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 126.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 122.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 121.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 119.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 119.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 118.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 117.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 117.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 113.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 113.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 111.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 108.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 108.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 105.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 98.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 96.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 92.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

215.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 215.0
FF:10164-103B2 76 years, female 215.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.4
Pig sample Sample description nTPM
Caudate
nTPM: 139.4
Samples: 4

Max nTPM: 162.4
Min nTPM: 114.7
Sample A Female 129.0
Sample B Female 151.6
Sample C Male 162.4
Sample D Male 114.7

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