PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:43.6 nTPM
FANTOM5:53.2 Scaled Tags Per Million
Pig:37.4 nTPM
Mouse:24.0 nTPM
Allen mouse:6.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 43.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 37.1
2090 Male, age 80, both hemispheres 39.0
2188 Female, age 91, both hemispheres 38.1
1984 Male, age 76, both hemispheres 35.9
2301 Female, age 85, both hemispheres 35.6
Area postrema
nTPM: 39.7
2799 Male, age 61, both hemispheres 40.9
2306 Male, age 80, both hemispheres 39.8
2054 Male, age 76, both hemispheres 38.5
Dorsal cochlear nucleus
nTPM: 36.0
2058 Male, age 76, both hemispheres 38.7
2802 Male, age 74, right hemisphere 36.8
2187 Female, age 91, both hemispheres 36.4
2378 Male, age 80, both hemispheres 35.5
2370 Male, age 61, both hemispheres 32.6
Dorsal medullary reticular nucleus
nTPM: 35.5
2040 Female, age 85, both hemispheres 36.3
2088 Male, age 76, both hemispheres 35.5
2373 Male, age 61, both hemispheres 34.8
Dorsal motor vagal complex
nTPM: 38.2
2643 Male, age 74, both hemispheres 42.0
2185 Male, age 76, both hemispheres 40.9
2844 Male, age 55, unknown 39.7
2813 Female, age 72, unknown 38.6
2133 Female, age 91, both hemispheres 38.2
2000 Male, age 74, unknown 37.5
2797 Male, age 61, both hemispheres 34.9
2807 Female, age 85, both hemispheres 33.4
Dorsal tegmental nucleus
nTPM: 38.5
2358 Male, age 61, both hemispheres 47.7
2083 Male, age 80, both hemispheres 39.1
2326 Male, age 74, both hemispheres 34.0
1936 Male, age 76, left hemisphere 33.3
Dorsolateral tegmental area
nTPM: 35.9
2337 Male, age 61, both hemispheres 38.1
2654 Male, age 80, both hemispheres 36.6
2360 Male, age 74, both hemispheres 35.1
2141 Male, age 76, both hemispheres 34.9
2751 Female, age 85, both hemispheres 34.5
Gigantocellular reticular nuclei, medullary
nTPM: 38.1
2462 Male, age 74, both hemispheres 43.4
2310 Male, age 80, both hemispheres 38.2
2387 Female, age 91, both hemispheres 37.3
2022 Male, age 76, right hemisphere 37.2
1876 Female, age 85, both hemispheres 36.7
2314 Male, age 61, both hemispheres 35.9
Gigantocellular reticular nuclei, pars
nTPM: 38.1
2168 Male, age 76, both hemispheres 41.0
2706 Male, age 80, both hemispheres 39.6
2330 Male, age 80, both hemispheres 39.3
2084 Female, age 85, both hemispheres 36.1
2336 Male, age 61, both hemispheres 34.6
Inferior olive
nTPM: 40.4
2563 Male, age 74, both hemispheres 45.0
2628 Female, age 91, both hemispheres 44.9
2085 Female, age 85, both hemispheres 41.0
2178 Male, age 61, both hemispheres 35.8
2379 Male, age 80, both hemispheres 35.2
Kolliker-Fuse nucleus
nTPM: 38.6
2793 Female, age 91, left hemisphere 40.7
2315 Male, age 76, right hemisphere 39.2
2163 Male, age 80, both hemispheres 36.0
Lateral lemniscal nuclei
nTPM: 40.8
2169 Male, age 76, both hemispheres 43.7
2746 Female, age 85, left hemisphere 42.2
2036 Male, age 80, both hemispheres 40.2
2320 Female, age 91, left hemisphere 39.2
2453 Male, age 74, right hemisphere 38.6
Lateral medullary reticular nucleus
nTPM: 39.7
2852 Male, age 80, both hemispheres 42.0
2044 Male, age 76, both hemispheres 41.1
2305 Male, age 74, both hemispheres 40.2
2374 Male, age 61, both hemispheres 39.7
2804 Female, age 91, both hemispheres 38.6
2190 Female, age 85, both hemispheres 36.7
Lateral parabrachial nucleus
nTPM: 39.7
2139 Female, age 85, right hemisphere 43.5
2792 Male, age 76, both hemispheres 39.2
2013 Male, age 80, both hemispheres 38.3
2790 Male, age 61, both hemispheres 37.9
Lateral vestibular nucleus
nTPM: 36.3
2184 Male, age 76, both hemispheres 36.7
2311 Male, age 80, both hemispheres 35.8
Locus coeruleus
nTPM: 36.2
2123 Female, age 91, both hemispheres 38.6
1980 Male, age 76, both hemispheres 37.9
2014 Male, age 55, unknown 37.1
2720 Male, age 74, both hemispheres 37.1
2317 Female, age 72, unknown 35.8
2162 Male, age 80, both hemispheres 35.5
2788 Male, age 74, unknown 31.6
Medial olivary nucleus
nTPM: 36.8
2851 Male, age 80, both hemispheres 38.7
1962 Male, age 76, both hemispheres 37.1
2138 Female, age 91, both hemispheres 36.0
1943 Male, age 61, both hemispheres 35.2
Medial parabrachial nucleus
nTPM: 36.6
2156 Male, age 61, both hemispheres 38.6
2786 Male, age 76, both hemispheres 37.7
2170 Female, age 91, both hemispheres 36.4
2854 Male, age 80, both hemispheres 35.4
2463 Female, age 85, right hemisphere 35.0
Medial periolivary nuclei
nTPM: 40.8
2171 Female, age 85, both hemispheres 44.8
2063 Male, age 76, both hemispheres 43.3
2791 Male, age 74, right hemisphere 40.6
2081 Male, age 80, both hemispheres 38.7
2458 Female, age 91, both hemispheres 36.8
Medial vestibular nucleus
nTPM: 36.6
2624 Male, age 61, both hemispheres 39.4
2801 Male, age 74, both hemispheres 37.2
2134 Male, age 76, both hemispheres 36.6
2743 Female, age 85, both hemispheres 36.4
2093 Male, age 80, both hemispheres 36.3
2803 Female, age 91, both hemispheres 34.0
Motor facial nucleus
nTPM: 40.1
2062 Male, age 76, both hemispheres 44.5
2365 Male, age 74, right hemisphere 40.9
2327 Male, age 80, both hemispheres 40.4
2697 Female, age 85, both hemispheres 40.2
2795 Female, age 91, both hemispheres 38.4
2126 Male, age 61, both hemispheres 35.9
Motor hypoglossal nucleus
nTPM: 37.5
2182 Male, age 80, both hemispheres 41.8
2125 Female, age 91, both hemispheres 38.8
2132 Female, age 85, both hemispheres 37.8
2461 Male, age 61, both hemispheres 35.3
2277 Male, age 76, both hemispheres 33.9
Motor trigeminal nucleus
nTPM: 38.5
2560 Male, age 74, both hemispheres 43.0
2079 Male, age 80, both hemispheres 39.1
2309 Male, age 76, both hemispheres 37.1
2335 Male, age 61, both hemispheres 36.9
2321 Female, age 91, both hemispheres 36.3
Nuclei of the trapezoid body
nTPM: 40.9
2159 Male, age 61, both hemispheres 44.0
1983 Male, age 76, both hemispheres 43.6
2735 Female, age 85, both hemispheres 43.2
2166 Male, age 80, both hemispheres 37.6
2368 Female, age 91, both hemispheres 36.1
Nucleus ambiguus
nTPM: 43.0
2071 Male, age 76, both hemispheres 43.6
2096 Female, age 85, both hemispheres 42.4
Nucleus cuneatus
nTPM: 37.0
2564 Male, age 74, both hemispheres 42.1
2100 Male, age 76, both hemispheres 39.1
2131 Male, age 76, both hemispheres 39.0
2562 Male, age 61, both hemispheres 36.9
2381 Male, age 80, both hemispheres 36.1
2376 Male, age 61, both hemispheres 35.5
2808 Female, age 85, both hemispheres 35.0
2805 Female, age 91, both hemispheres 34.7
2380 Male, age 80, both hemispheres 34.1
Nucleus gracilis
nTPM: 40.6
2627 Male, age 74, both hemispheres 45.9
2382 Male, age 80, both hemispheres 38.2
2299 Female, age 85, both hemispheres 37.8
Nucleus raphe magnus
nTPM: 42.6
2160 Male, age 61, both hemispheres 49.9
2172 Female, age 85, both hemispheres 44.7
2455 Male, age 74, both hemispheres 43.5
2328 Male, age 80, both hemispheres 40.2
2051 Male, age 76, both hemispheres 39.3
2459 Female, age 91, both hemispheres 37.9
Nucleus raphe obscurus
nTPM: 38.6
2845 Female, age 85, midline 40.7
2800 Male, age 61, midline 37.6
2142 Male, age 76, midline 37.4
Nucleus raphe pallidus
nTPM: 38.1
1924 Male, age 61, midline 39.9
2183 Male, age 80, midline 37.5
2145 Male, age 76, midline 36.8
Nucleus tractus solitarii
nTPM: 33.5
2656 Male, age 76, both hemispheres 38.5
2191 Female, age 85, both hemispheres 34.5
2307 Male, age 80, both hemispheres 31.4
2144 Female, age 91, right hemisphere 29.6
Paramedian reticular nucleus
nTPM: 34.3
2050 Female, age 85, both hemispheres 39.5
2313 Male, age 61, both hemispheres 34.5
2057 Male, age 80, both hemispheres 33.0
2052 Male, age 76, both hemispheres 30.3
Parvicellular reticular nuclei
nTPM: 38.9
2558 Male, age 74, both hemispheres 44.6
2095 Male, age 76, both hemispheres 36.2
2119 Male, age 80, both hemispheres 35.8
Parvicellular reticular nuclei, medullary
nTPM: 36.0
2189 Female, age 91, both hemispheres 38.1
2181 Male, age 80, left hemisphere 35.4
2091 Female, age 85, both hemispheres 34.6
Pedunculopontine tegmental nucleus
nTPM: 35.8
1921 Female, age 85, both hemispheres 38.4
2338 Male, age 61, both hemispheres 35.1
2334 Male, age 80, both hemispheres 34.0
Peritrigeminal nucleus
nTPM: 39.2
2136 Male, age 76, both hemispheres 41.0
2067 Female, age 85, both hemispheres 39.1
2179 Male, age 61, both hemispheres 37.3
Pontine nuclei
nTPM: 43.6
2787 Female, age 85, both hemispheres 51.8
1863 Male, age 55, unknown 46.0
2727 Male, age 61, right hemisphere 45.0
2454 Male, age 74, left hemisphere 44.1
1968 Male, age 76, left hemisphere 42.6
2109 Female, age 72, unknown 41.6
2115 Male, age 80, left hemisphere 39.4
2319 Female, age 91, both hemispheres 38.3
Pontine raphe nucleus
nTPM: 39.7
2122 Female, age 85, midline 42.8
2853 Male, age 76, midline 36.6
Posteroventral cochlear nucleus
nTPM: 36.2
2070 Male, age 76, both hemispheres 39.1
2135 Female, age 91, both hemispheres 39.1
2341 Male, age 80, both hemispheres 35.5
2752 Female, age 85, both hemispheres 35.3
2371 Male, age 61, both hemispheres 32.1
Prepositus hypoglossal nucleus
nTPM: 35.5
2086 Male, age 80, both hemispheres 37.9
2855 Female, age 85, right hemisphere 33.0
Principal sensory trigeminal nucleus
nTPM: 41.0
2158 Male, age 61, both hemispheres 47.6
2008 Male, age 80, left hemisphere 42.5
2324 Male, age 76, both hemispheres 37.0
2367 Female, age 91, left hemisphere 36.9
Reticular pontine nucleus, caudal
nTPM: 41.0
2092 Male, age 76, both hemispheres 41.9
2457 Female, age 91, both hemispheres 41.5
2559 Male, age 74, both hemispheres 40.5
2332 Male, age 80, right hemisphere 40.0
Reticular pontine nucleus, oral
nTPM: 40.8
2361 Male, age 74, both hemispheres 49.2
2012 Female, age 85, both hemispheres 41.5
1939 Male, age 80, both hemispheres 38.4
2366 Female, age 91, both hemispheres 37.8
2167 Male, age 76, both hemispheres 37.0
Reticulotegmental nucleus
nTPM: 35.4
2325 Male, age 76, both hemispheres 37.9
2452 Male, age 74, both hemispheres 36.6
2333 Male, age 80, both hemispheres 35.4
2322 Female, age 91, both hemispheres 31.7
Spinal trigeminal nucleus, caudal
nTPM: 38.4
2642 Male, age 74, both hemispheres 41.1
2308 Male, age 80, both hemispheres 38.7
2447 Male, age 76, both hemispheres 38.3
2312 Male, age 61, both hemispheres 37.3
2390 Female, age 91, both hemispheres 36.8
Spinal trigeminal nucleus, interpolar
nTPM: 37.9
2625 Male, age 61, both hemispheres 40.1
2066 Male, age 76, right hemisphere 39.9
2389 Female, age 91, both hemispheres 36.7
2386 Female, age 85, both hemispheres 36.4
2033 Male, age 80, both hemispheres 36.3
Spinal trigeminal nucleus, oral
nTPM: 35.4
1978 Male, age 76, both hemispheres 37.2
2164 Male, age 80, both hemispheres 35.7
2737 Female, age 85, both hemispheres 33.3
Spinal vestibular nucleus
nTPM: 35.9
2748 Male, age 76, both hemispheres 38.2
2780 Male, age 80, both hemispheres 38.0
2796 Male, age 61, both hemispheres 35.7
2384 Male, age 74, both hemispheres 34.9
2186 Female, age 91, both hemispheres 34.6
2806 Female, age 85, both hemispheres 33.7
Subcoeruleus area
nTPM: 37.7
1958 Male, age 80, both hemispheres 41.6
2089 Male, age 76, left hemisphere 39.9
2323 Female, age 91, left hemisphere 37.0
2369 Female, age 85, left hemisphere 35.8
2451 Male, age 74, both hemispheres 34.3
Superior olive
nTPM: 42.3
1875 Female, age 85, both hemispheres 45.1
2020 Male, age 76, both hemispheres 42.4
2364 Male, age 74, right hemisphere 42.2
2329 Male, age 80, right hemisphere 41.3
2561 Female, age 91, both hemispheres 40.2
Superior vestibular nucleus
nTPM: 37.1
2061 Male, age 76, both hemispheres 39.8
2015 Male, age 80, both hemispheres 36.0
2383 Male, age 74, both hemispheres 35.6
Ventral medullary reticular nucleus
nTPM: 38.1
2060 Male, age 76, both hemispheres 40.3
2372 Male, age 61, both hemispheres 35.9
Ventral periolivary nuclei
nTPM: 39.4
2130 Female, age 85, both hemispheres 42.1
2165 Male, age 80, both hemispheres 41.1
2023 Male, age 76, both hemispheres 38.9
2794 Female, age 91, left hemisphere 35.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 37.7
2118 Male, age 80, both hemispheres 38.9
1986 Male, age 76, both hemispheres 38.6
2302 Female, age 91, both hemispheres 38.4
2741 Female, age 85, both hemispheres 37.6
2180 Male, age 61, both hemispheres 34.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 38.5
2449 Male, age 74, both hemispheres 42.1
2161 Male, age 80, both hemispheres 39.8
1959 Male, age 76, both hemispheres 38.8
2840 Female, age 85, both hemispheres 38.2
2359 Male, age 61, both hemispheres 36.3
2456 Female, age 91, both hemispheres 36.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 53.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 37.6
FF:10182-103D2 60 years, female 39.2
FF:10165-103B3 76 years, female 36.0
Medulla oblongata
Scaled Tags Per Million: 49.2
FF:10038-101F2 18-64 years, mixed 57.5
FF:10174-103C3 60 years, female 46.6
FF:10155-103A2 76 years, female 43.5
Pons
Scaled Tags Per Million: 53.2
FF:10033-101E6 18-54 years, mixed 53.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 37.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 37.4
Samples: 4

Max nTPM: 40.5
Min nTPM: 31.8
Sample A Female 37.1
Sample B Female 31.8
Sample C Male 40.5
Sample D Male 40.3
Pons
nTPM: 37.0
Samples: 4

Max nTPM: 43.4
Min nTPM: 28.4
Sample A Female 43.4
Sample B Female 28.4
Sample C Male 34.9
Sample D Male 41.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 24.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 24.0
Samples: 4

Max nTPM: 25.1
Min nTPM: 22.7
Sample A Male 25.1
Sample B Male 24.2
Sample C Female 23.9
Sample D Female 22.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.2
68799143 Antisense, RP_050217_02_B05, Mouse strain C57BL/6J (56 days, male) 6.2
Pons
Expression energy: 5.4
68799143 Antisense, RP_050217_02_B05, Mouse strain C57BL/6J (56 days, male) 5.4

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