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C1orf43
HPA
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  • C1orf43
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:148.2 nTPM
FANTOM5:145.4 Scaled Tags Per Million
Pig:24.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010725
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 148.2
Samples: 246

Max nTPM: 296.7
Min nTPM: 94.4
Std nTPM: 28.5
Median nTPM: 143.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 296.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 275.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 245.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 244.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 238.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 237.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 225.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 219.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 200.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 197.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 194.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 193.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 193.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 192.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 190.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 190.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 190.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 190.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 189.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 187.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 186.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 186.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 185.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 185.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 185.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 183.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 182.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 181.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 180.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 179.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 178.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 178.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 176.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 176.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 176.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 175.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 175.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 174.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 174.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 171.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 170.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 170.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 170.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 169.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 169.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 168.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 168.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 168.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 167.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 167.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 166.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 165.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 165.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 164.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 164.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 163.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 161.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 161.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 159.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 159.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 159.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 159.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 158.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 158.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 158.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 157.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 157.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 157.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 157.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 156.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 156.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 155.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 155.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 155.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 155.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 155.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 154.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 154.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 153.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 153.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 152.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 152.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 152.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 151.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 151.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 150.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 150.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 150.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 149.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 149.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 149.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 149.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 149.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 149.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 148.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 148.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 148.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 148.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 148.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 148.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 147.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 147.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 147.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 147.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 147.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 146.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 146.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 146.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 145.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 145.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 145.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 145.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 144.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 144.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 144.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 144.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 143.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 143.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 143.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 143.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 143.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 143.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 143.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 143.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 143.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 143.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 142.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 142.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 142.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 142.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 141.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 141.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 141.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 141.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 141.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 141.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 140.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 140.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 140.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 139.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 139.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 139.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 139.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 139.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 139.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 139.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 138.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 138.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 138.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 138.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 137.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 137.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 137.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 136.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 136.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 136.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 136.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 136.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 136.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 136.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 136.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 136.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 136.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 135.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 135.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 135.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 135.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 134.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 134.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 134.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 134.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 134.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 133.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 133.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 133.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 133.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 132.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 132.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 132.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 131.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 131.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 131.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 131.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 130.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 130.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 130.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 130.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 130.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 130.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 129.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 129.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 128.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 128.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 128.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 128.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 128.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 128.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 127.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 127.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 126.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 125.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 125.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 125.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 125.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 125.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 124.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 123.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 123.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 123.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 123.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 122.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 121.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 121.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 120.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 119.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 119.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 119.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 119.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 119.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 118.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 118.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 118.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 117.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 117.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 117.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 116.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 116.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 116.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 116.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 115.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 113.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 113.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 112.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 111.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 111.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 110.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 110.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 110.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 108.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 107.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 104.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 103.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 103.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 102.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 98.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 94.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

145.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 145.4
FF:10164-103B2 76 years, female 145.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.9
Pig sample Sample description nTPM
Caudate
nTPM: 24.9
Samples: 4

Max nTPM: 27.6
Min nTPM: 23.1
Sample A Female 23.4
Sample B Female 25.3
Sample C Male 27.6
Sample D Male 23.1

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