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ARF1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:213.6 nTPM
FANTOM5:285.2 Scaled Tags Per Million
Pig:264.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB007742
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 213.6
Samples: 246

Max nTPM: 360.1
Min nTPM: 132.2
Std nTPM: 38.5
Median nTPM: 215.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 360.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 332.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 304.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 294.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 294.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 291.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 290.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 287.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 283.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 281.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 280.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 280.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 277.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 270.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 270.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 269.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 268.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 265.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 264.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 263.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 263.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 262.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 262.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 262.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 261.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 261.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 259.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 259.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 259.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 259.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 258.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 257.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 255.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 254.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 254.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 254.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 253.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 253.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 252.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 251.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 251.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 251.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 251.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 250.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 249.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 248.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 247.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 246.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 245.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 245.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 244.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 244.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 244.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 243.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 243.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 242.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 242.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 242.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 242.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 241.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 241.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 240.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 240.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 239.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 238.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 238.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 237.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 237.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 235.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 235.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 235.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 233.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 233.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 233.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 232.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 232.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 232.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 231.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 231.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 231.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 231.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 231.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 228.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 228.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 228.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 226.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 226.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 225.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 225.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 225.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 224.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 224.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 224.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 223.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 223.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 223.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 223.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 223.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 223.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 223.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 223.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 222.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 222.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 222.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 221.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 221.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 221.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 221.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 220.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 219.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 219.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 219.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 219.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 219.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 219.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 218.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 218.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 217.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 217.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 217.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 216.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 216.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 216.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 215.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 214.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 214.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 214.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 214.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 214.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 213.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 212.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 212.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 212.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 212.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 211.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 211.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 211.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 210.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 208.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 208.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 208.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 207.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 207.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 206.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 205.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 205.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 203.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 203.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 202.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 202.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 201.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 201.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 200.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 199.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 199.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 198.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 197.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 196.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 196.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 196.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 195.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 194.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 194.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 194.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 193.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 192.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 192.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 191.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 191.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 191.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 190.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 190.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 188.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 188.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 187.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 187.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 186.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 186.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 185.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 185.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 185.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 185.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 185.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 185.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 184.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 184.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 184.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 183.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 183.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 182.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 182.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 182.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 181.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 181.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 181.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 181.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 178.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 178.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 178.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 177.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 177.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 176.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 175.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 175.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 175.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 173.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 173.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 173.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 172.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 172.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 171.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 171.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 170.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 170.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 168.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 168.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 168.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 167.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 164.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 163.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 162.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 161.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 160.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 160.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 159.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 158.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 157.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 157.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 157.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 155.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 152.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 151.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 151.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 151.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 151.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 150.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 147.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 146.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 146.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 142.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 142.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 141.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 140.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 139.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 139.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 132.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

285.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 285.2
FF:10164-103B2 76 years, female 285.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

264.1
Pig sample Sample description nTPM
Caudate
nTPM: 264.1
Samples: 4

Max nTPM: 302.8
Min nTPM: 238.3
Sample A Female 240.5
Sample B Female 274.8
Sample C Male 302.8
Sample D Male 238.3

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