PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:149.8 nTPM
FANTOM5:126.4 Scaled Tags Per Million
Pig:18.1 nTPM
Mouse:11.0 nTPM
Allen mouse:16.7 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 149.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 37.5
2188 Female, age 91, both hemispheres 53.6
2301 Female, age 85, both hemispheres 49.5
1984 Male, age 76, both hemispheres 30.1
2090 Male, age 80, both hemispheres 16.8
Area postrema
nTPM: 6.9
2054 Male, age 76, both hemispheres 13.5
2799 Male, age 61, both hemispheres 4.0
2306 Male, age 80, both hemispheres 3.1
Dorsal cochlear nucleus
nTPM: 12.0
2187 Female, age 91, both hemispheres 17.8
2058 Male, age 76, both hemispheres 14.3
2370 Male, age 61, both hemispheres 11.3
2378 Male, age 80, both hemispheres 9.0
2802 Male, age 74, right hemisphere 7.7
Dorsal medullary reticular nucleus
nTPM: 12.5
2040 Female, age 85, both hemispheres 16.9
2373 Male, age 61, both hemispheres 10.9
2088 Male, age 76, both hemispheres 9.8
Dorsal motor vagal complex
nTPM: 14.4
2133 Female, age 91, both hemispheres 28.5
2000 Male, age 74, unknown 26.9
2807 Female, age 85, both hemispheres 12.6
2797 Male, age 61, both hemispheres 12.2
2844 Male, age 55, unknown 12.1
2813 Female, age 72, unknown 8.6
2643 Male, age 74, both hemispheres 8.2
2185 Male, age 76, both hemispheres 6.0
Dorsal tegmental nucleus
nTPM: 16.4
1936 Male, age 76, left hemisphere 22.0
2358 Male, age 61, both hemispheres 19.0
2083 Male, age 80, both hemispheres 15.9
2326 Male, age 74, both hemispheres 8.9
Dorsolateral tegmental area
nTPM: 12.6
2751 Female, age 85, both hemispheres 26.2
2654 Male, age 80, both hemispheres 13.9
2141 Male, age 76, both hemispheres 8.8
2360 Male, age 74, both hemispheres 8.4
2337 Male, age 61, both hemispheres 5.6
Gigantocellular reticular nuclei, medullary
nTPM: 53.7
2462 Male, age 74, both hemispheres 164.1
2310 Male, age 80, both hemispheres 76.7
2387 Female, age 91, both hemispheres 51.7
1876 Female, age 85, both hemispheres 13.9
2022 Male, age 76, right hemisphere 10.2
2314 Male, age 61, both hemispheres 5.6
Gigantocellular reticular nuclei, pars
nTPM: 62.0
2168 Male, age 76, both hemispheres 129.8
2706 Male, age 80, both hemispheres 81.5
2330 Male, age 80, both hemispheres 77.2
2084 Female, age 85, both hemispheres 11.8
2336 Male, age 61, both hemispheres 9.5
Inferior olive
nTPM: 12.5
2628 Female, age 91, both hemispheres 47.2
2085 Female, age 85, both hemispheres 6.7
2563 Male, age 74, both hemispheres 4.1
2178 Male, age 61, both hemispheres 2.5
2379 Male, age 80, both hemispheres 1.9
Kolliker-Fuse nucleus
nTPM: 51.6
2793 Female, age 91, left hemisphere 75.8
2163 Male, age 80, both hemispheres 42.5
2315 Male, age 76, right hemisphere 36.7
Lateral lemniscal nuclei
nTPM: 124.2
2036 Male, age 80, both hemispheres 142.2
2453 Male, age 74, right hemisphere 132.5
2746 Female, age 85, left hemisphere 123.2
2169 Male, age 76, both hemispheres 122.2
2320 Female, age 91, left hemisphere 101.0
Lateral medullary reticular nucleus
nTPM: 15.6
2044 Male, age 76, both hemispheres 44.5
2305 Male, age 74, both hemispheres 16.0
2804 Female, age 91, both hemispheres 10.7
2190 Female, age 85, both hemispheres 10.1
2852 Male, age 80, both hemispheres 6.8
2374 Male, age 61, both hemispheres 5.6
Lateral parabrachial nucleus
nTPM: 60.3
2139 Female, age 85, right hemisphere 134.6
2013 Male, age 80, both hemispheres 54.9
2790 Male, age 61, both hemispheres 32.7
2792 Male, age 76, both hemispheres 19.1
Lateral vestibular nucleus
nTPM: 29.7
2184 Male, age 76, both hemispheres 50.2
2311 Male, age 80, both hemispheres 9.3
Locus coeruleus
nTPM: 21.3
2123 Female, age 91, both hemispheres 31.3
2720 Male, age 74, both hemispheres 24.1
2162 Male, age 80, both hemispheres 21.7
1980 Male, age 76, both hemispheres 19.2
2014 Male, age 55, unknown 18.4
2317 Female, age 72, unknown 17.7
2788 Male, age 74, unknown 16.6
Medial olivary nucleus
nTPM: 14.4
2851 Male, age 80, both hemispheres 34.7
1962 Male, age 76, both hemispheres 15.6
2138 Female, age 91, both hemispheres 4.7
1943 Male, age 61, both hemispheres 2.5
Medial parabrachial nucleus
nTPM: 27.7
2854 Male, age 80, both hemispheres 55.4
2463 Female, age 85, right hemisphere 34.0
2156 Male, age 61, both hemispheres 30.9
2786 Male, age 76, both hemispheres 9.4
2170 Female, age 91, both hemispheres 8.9
Medial periolivary nuclei
nTPM: 113.3
2171 Female, age 85, both hemispheres 184.7
2063 Male, age 76, both hemispheres 123.0
2791 Male, age 74, right hemisphere 99.6
2458 Female, age 91, both hemispheres 93.8
2081 Male, age 80, both hemispheres 65.5
Medial vestibular nucleus
nTPM: 37.9
2743 Female, age 85, both hemispheres 93.6
2134 Male, age 76, both hemispheres 47.2
2624 Male, age 61, both hemispheres 32.5
2801 Male, age 74, both hemispheres 30.1
2803 Female, age 91, both hemispheres 13.1
2093 Male, age 80, both hemispheres 10.8
Motor facial nucleus
nTPM: 110.0
2327 Male, age 80, both hemispheres 165.0
2062 Male, age 76, both hemispheres 134.2
2365 Male, age 74, right hemisphere 130.0
2697 Female, age 85, both hemispheres 122.2
2795 Female, age 91, both hemispheres 81.7
2126 Male, age 61, both hemispheres 27.0
Motor hypoglossal nucleus
nTPM: 20.6
2125 Female, age 91, both hemispheres 30.9
2461 Male, age 61, both hemispheres 27.1
2132 Female, age 85, both hemispheres 18.7
2182 Male, age 80, both hemispheres 15.2
2277 Male, age 76, both hemispheres 11.0
Motor trigeminal nucleus
nTPM: 58.7
2079 Male, age 80, both hemispheres 121.7
2560 Male, age 74, both hemispheres 82.3
2321 Female, age 91, both hemispheres 57.3
2335 Male, age 61, both hemispheres 19.3
2309 Male, age 76, both hemispheres 12.9
Nuclei of the trapezoid body
nTPM: 140.4
2735 Female, age 85, both hemispheres 202.3
2159 Male, age 61, both hemispheres 150.7
2166 Male, age 80, both hemispheres 119.1
1983 Male, age 76, both hemispheres 116.3
2368 Female, age 91, both hemispheres 113.5
Nucleus ambiguus
nTPM: 11.5
2096 Female, age 85, both hemispheres 19.0
2071 Male, age 76, both hemispheres 3.9
Nucleus cuneatus
nTPM: 11.9
2131 Male, age 76, both hemispheres 26.1
2376 Male, age 61, both hemispheres 22.3
2564 Male, age 74, both hemispheres 11.2
2562 Male, age 61, both hemispheres 9.9
2381 Male, age 80, both hemispheres 9.7
2100 Male, age 76, both hemispheres 8.9
2808 Female, age 85, both hemispheres 7.1
2805 Female, age 91, both hemispheres 6.4
2380 Male, age 80, both hemispheres 5.4
Nucleus gracilis
nTPM: 7.5
2627 Male, age 74, both hemispheres 12.4
2382 Male, age 80, both hemispheres 5.0
2299 Female, age 85, both hemispheres 4.9
Nucleus raphe magnus
nTPM: 149.8
2172 Female, age 85, both hemispheres 220.9
2455 Male, age 74, both hemispheres 175.1
2160 Male, age 61, both hemispheres 172.3
2328 Male, age 80, both hemispheres 134.6
2459 Female, age 91, both hemispheres 109.5
2051 Male, age 76, both hemispheres 86.7
Nucleus raphe obscurus
nTPM: 12.4
2845 Female, age 85, midline 22.0
2800 Male, age 61, midline 12.6
2142 Male, age 76, midline 2.5
Nucleus raphe pallidus
nTPM: 21.0
1924 Male, age 61, midline 35.6
2183 Male, age 80, midline 23.0
2145 Male, age 76, midline 4.4
Nucleus tractus solitarii
nTPM: 20.3
2144 Female, age 91, right hemisphere 35.6
2191 Female, age 85, both hemispheres 24.8
2307 Male, age 80, both hemispheres 12.9
2656 Male, age 76, both hemispheres 7.9
Paramedian reticular nucleus
nTPM: 35.2
2050 Female, age 85, both hemispheres 103.1
2313 Male, age 61, both hemispheres 15.1
2057 Male, age 80, both hemispheres 13.5
2052 Male, age 76, both hemispheres 8.9
Parvicellular reticular nuclei
nTPM: 62.1
2558 Male, age 74, both hemispheres 139.7
2095 Male, age 76, both hemispheres 36.6
2119 Male, age 80, both hemispheres 9.9
Parvicellular reticular nuclei, medullary
nTPM: 22.1
2091 Female, age 85, both hemispheres 29.9
2189 Female, age 91, both hemispheres 22.5
2181 Male, age 80, left hemisphere 14.0
Pedunculopontine tegmental nucleus
nTPM: 18.8
2338 Male, age 61, both hemispheres 23.8
1921 Female, age 85, both hemispheres 21.6
2334 Male, age 80, both hemispheres 11.1
Peritrigeminal nucleus
nTPM: 38.2
2179 Male, age 61, both hemispheres 45.5
2136 Male, age 76, both hemispheres 35.2
2067 Female, age 85, both hemispheres 33.9
Pontine nuclei
nTPM: 117.3
2787 Female, age 85, both hemispheres 217.9
1863 Male, age 55, unknown 147.9
2727 Male, age 61, right hemisphere 119.8
2109 Female, age 72, unknown 115.8
1968 Male, age 76, left hemisphere 102.7
2454 Male, age 74, left hemisphere 91.4
2115 Male, age 80, left hemisphere 85.7
2319 Female, age 91, both hemispheres 57.3
Pontine raphe nucleus
nTPM: 57.5
2122 Female, age 85, midline 111.7
2853 Male, age 76, midline 3.3
Posteroventral cochlear nucleus
nTPM: 15.4
2752 Female, age 85, both hemispheres 35.5
2070 Male, age 76, both hemispheres 21.1
2371 Male, age 61, both hemispheres 13.7
2341 Male, age 80, both hemispheres 3.7
2135 Female, age 91, both hemispheres 3.2
Prepositus hypoglossal nucleus
nTPM: 25.1
2855 Female, age 85, right hemisphere 28.4
2086 Male, age 80, both hemispheres 21.8
Principal sensory trigeminal nucleus
nTPM: 100.1
2158 Male, age 61, both hemispheres 146.0
2008 Male, age 80, left hemisphere 131.1
2367 Female, age 91, left hemisphere 84.4
2324 Male, age 76, both hemispheres 39.0
Reticular pontine nucleus, caudal
nTPM: 84.2
2332 Male, age 80, right hemisphere 153.9
2092 Male, age 76, both hemispheres 89.7
2457 Female, age 91, both hemispheres 83.1
2559 Male, age 74, both hemispheres 10.0
Reticular pontine nucleus, oral
nTPM: 71.2
2361 Male, age 74, both hemispheres 124.2
2012 Female, age 85, both hemispheres 118.0
2366 Female, age 91, both hemispheres 67.8
1939 Male, age 80, both hemispheres 27.7
2167 Male, age 76, both hemispheres 18.1
Reticulotegmental nucleus
nTPM: 46.1
2325 Male, age 76, both hemispheres 68.7
2333 Male, age 80, both hemispheres 49.1
2452 Male, age 74, both hemispheres 33.5
2322 Female, age 91, both hemispheres 33.2
Spinal trigeminal nucleus, caudal
nTPM: 19.4
2390 Female, age 91, both hemispheres 37.8
2642 Male, age 74, both hemispheres 17.3
2447 Male, age 76, both hemispheres 14.9
2312 Male, age 61, both hemispheres 13.9
2308 Male, age 80, both hemispheres 13.1
Spinal trigeminal nucleus, interpolar
nTPM: 45.0
2389 Female, age 91, both hemispheres 79.0
2066 Male, age 76, right hemisphere 66.6
2625 Male, age 61, both hemispheres 50.5
2386 Female, age 85, both hemispheres 14.8
2033 Male, age 80, both hemispheres 13.9
Spinal trigeminal nucleus, oral
nTPM: 28.0
2737 Female, age 85, both hemispheres 37.6
2164 Male, age 80, both hemispheres 33.0
1978 Male, age 76, both hemispheres 13.5
Spinal vestibular nucleus
nTPM: 12.2
2780 Male, age 80, both hemispheres 13.7
2748 Male, age 76, both hemispheres 12.8
2806 Female, age 85, both hemispheres 12.5
2796 Male, age 61, both hemispheres 12.4
2186 Female, age 91, both hemispheres 12.0
2384 Male, age 74, both hemispheres 10.1
Subcoeruleus area
nTPM: 40.0
2089 Male, age 76, left hemisphere 87.4
1958 Male, age 80, both hemispheres 67.2
2369 Female, age 85, left hemisphere 19.0
2323 Female, age 91, left hemisphere 16.9
2451 Male, age 74, both hemispheres 9.5
Superior olive
nTPM: 119.7
1875 Female, age 85, both hemispheres 175.2
2329 Male, age 80, right hemisphere 123.5
2561 Female, age 91, both hemispheres 113.6
2364 Male, age 74, right hemisphere 107.0
2020 Male, age 76, both hemispheres 79.0
Superior vestibular nucleus
nTPM: 14.7
2015 Male, age 80, both hemispheres 20.9
2061 Male, age 76, both hemispheres 13.2
2383 Male, age 74, both hemispheres 9.9
Ventral medullary reticular nucleus
nTPM: 8.9
2060 Male, age 76, both hemispheres 10.5
2372 Male, age 61, both hemispheres 7.3
Ventral periolivary nuclei
nTPM: 138.4
2130 Female, age 85, both hemispheres 191.2
2165 Male, age 80, both hemispheres 147.1
2794 Female, age 91, left hemisphere 137.5
2023 Male, age 76, both hemispheres 77.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 31.1
2302 Female, age 91, both hemispheres 47.3
2741 Female, age 85, both hemispheres 42.8
1986 Male, age 76, both hemispheres 39.7
2180 Male, age 61, both hemispheres 13.0
2118 Male, age 80, both hemispheres 12.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 84.9
2449 Male, age 74, both hemispheres 154.7
2161 Male, age 80, both hemispheres 102.9
1959 Male, age 76, both hemispheres 93.6
2456 Female, age 91, both hemispheres 85.3
2840 Female, age 85, both hemispheres 56.1
2359 Male, age 61, both hemispheres 16.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 126.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 15.7
FF:10182-103D2 60 years, female 19.1
FF:10165-103B3 76 years, female 12.3
Medulla oblongata
Scaled Tags Per Million: 16.3
FF:10155-103A2 76 years, female 28.4
FF:10038-101F2 18-64 years, mixed 12.0
FF:10174-103C3 60 years, female 8.6
Pons
Scaled Tags Per Million: 126.4
FF:10033-101E6 18-54 years, mixed 126.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 18.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 7.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 2.6
Sample A Female 8.3
Sample B Female 8.4
Sample C Male 9.6
Sample D Male 2.6
Pons
nTPM: 18.1
Samples: 4

Max nTPM: 45.7
Min nTPM: 4.0
Sample A Female 45.7
Sample B Female 4.0
Sample C Male 5.8
Sample D Male 16.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 11.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 11.0
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.6
Sample A Male 10.1
Sample B Male 11.4
Sample C Female 13.0
Sample D Female 9.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 16.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 16.3
308054780 Antisense, RP_110623_02_C10, Mouse strain C57BL/6J (56 days, male) 16.3
Pons
Expression energy: 16.7
308054780 Antisense, RP_110623_02_C10, Mouse strain C57BL/6J (56 days, male) 16.7

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