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ARL6IP5
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  • ARL6IP5
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:80.9 nTPM
FANTOM5:176.1 Scaled Tags Per Million
Pig:72.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA015540Antibody CAB019321
Glial cells MediumMedium
Neuronal cells MediumLow




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 80.9
Samples: 246

Max nTPM: 177.8
Min nTPM: 39.3
Std nTPM: 20.4
Median nTPM: 78.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 177.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 159.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 144.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 143.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 139.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 138.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 132.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 127.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 126.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 124.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 118.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 113.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 112.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 112.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 111.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 111.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 111.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 108.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 108.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 108.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 107.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 107.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 107.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 106.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 105.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 104.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 104.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 103.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 101.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 101.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 101.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 101.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 100.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 100.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 99.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 99.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 99.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 98.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 98.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 98.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 97.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 97.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 97.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 96.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 96.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 96.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 96.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 96.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 96.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 95.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 93.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 93.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 92.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 92.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 92.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 92.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 90.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 90.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 90.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 90.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 90.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 90.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 89.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 89.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 89.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 89.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 89.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 89.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 89.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 89.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 88.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 88.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 88.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 88.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 88.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 87.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 87.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 86.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 86.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 86.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 86.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 86.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 86.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 86.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 86.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 85.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 85.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 85.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 85.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 85.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 85.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 84.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 84.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 84.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 84.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 84.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 84.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 83.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 83.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 83.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 83.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 82.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 82.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 81.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 81.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 80.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 80.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 80.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 80.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 80.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 80.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 80.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 80.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 79.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 79.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 79.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 79.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 79.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 79.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 79.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 78.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 78.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 78.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 77.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 77.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 77.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 76.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 76.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 76.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 76.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 76.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 76.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 76.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 76.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 76.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 75.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 75.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 75.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 75.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 75.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 75.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 75.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 75.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 75.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 74.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 74.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 74.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 74.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 74.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 73.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 73.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 73.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 73.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 73.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 72.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 72.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 71.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 71.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 71.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 71.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 71.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 71.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 70.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 70.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 70.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 70.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 70.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 70.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 70.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 70.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 69.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 69.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 69.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 69.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 69.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 68.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 68.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 68.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 68.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 67.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 67.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 67.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 67.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 67.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 67.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 66.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 66.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 66.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 66.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 66.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 65.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 64.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 64.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 63.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 63.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 63.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 63.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 63.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 62.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 62.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 62.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 61.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 60.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 60.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 59.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 58.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 58.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 58.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 58.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 58.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 58.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 57.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 56.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 56.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 55.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 55.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 55.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 55.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 54.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 53.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 52.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 52.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 52.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 51.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 50.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 49.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 49.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 49.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 49.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 48.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 47.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 46.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 46.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 45.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 44.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 39.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

176.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 176.1
FF:10164-103B2 76 years, female 176.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.3
Pig sample Sample description nTPM
Caudate
nTPM: 72.3
Samples: 4

Max nTPM: 80.4
Min nTPM: 65.4
Sample A Female 65.4
Sample B Female 70.4
Sample C Male 80.4
Sample D Male 72.9

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