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ALDH1L1
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  • ALDH1L1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:63.1 nTPM
FANTOM5:49.3 Scaled Tags Per Million
Pig:15.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036900Antibody HPA050139
Glial cells HighMedium
Neuronal cells MediumNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 63.1
Samples: 246

Max nTPM: 194.3
Min nTPM: 9.7
Std nTPM: 31.6
Median nTPM: 55.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 194.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 192.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 162.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 160.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 159.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 157.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 153.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 140.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 133.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 128.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 127.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 127.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 124.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 122.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 120.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 119.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 111.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 109.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 108.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 108.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 107.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 106.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 105.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 102.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 102.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 102.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 102.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 101.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 100.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 98.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 96.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 95.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 95.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 95.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 94.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 91.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 89.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 89.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 88.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 87.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 87.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 86.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 86.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 86.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 85.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 85.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 85.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 84.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 84.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 84.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 84.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 84.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 84.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 84.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 83.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 82.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 81.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 80.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 80.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 80.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 78.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 78.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 78.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 78.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 78.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 75.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 74.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 74.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 74.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 74.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 73.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 73.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 73.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 73.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 72.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 72.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 72.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 72.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 72.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 72.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 72.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 70.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 70.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 70.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 68.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 68.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 67.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 66.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 66.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 66.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 66.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 66.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 66.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 66.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 66.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 65.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 65.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 65.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 64.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 64.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 63.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 63.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 63.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 63.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 63.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 62.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 62.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 60.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 60.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 60.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 60.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 59.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 58.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 58.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 58.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 58.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 57.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 56.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 56.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 56.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 55.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 55.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 55.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 54.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 54.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 54.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 54.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 54.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 54.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 54.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 53.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 52.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 52.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 52.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 52.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 52.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 51.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 51.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 51.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 50.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 50.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 50.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 49.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 48.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 48.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 48.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 48.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 47.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 47.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 47.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 47.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 46.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 46.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 46.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 46.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 46.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 46.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 45.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 45.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 45.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 45.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 45.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 44.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 44.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 44.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 44.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 43.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 43.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 43.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 42.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 42.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 42.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 42.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 41.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 41.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 41.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 41.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 41.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 40.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 40.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 39.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 39.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 39.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 39.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 38.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 38.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 38.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 38.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 38.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 37.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 36.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 36.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 36.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 36.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 36.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 35.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 35.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 34.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 34.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 34.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 34.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 33.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 33.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 32.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 32.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 31.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 31.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 30.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 30.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 30.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 30.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 29.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 29.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 29.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 28.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 27.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 27.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 26.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 26.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 25.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 23.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 21.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 20.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 18.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 16.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 15.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 14.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 13.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 13.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 12.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 10.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 9.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 9.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

49.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 49.3
FF:10164-103B2 76 years, female 49.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.3
Pig sample Sample description nTPM
Caudate
nTPM: 15.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 11.1
Sample A Female 12.6
Sample B Female 19.3
Sample C Male 18.2
Sample D Male 11.1

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