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CPLX2
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  • CPLX2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:201.7 nTPM
FANTOM5:169.6 Scaled Tags Per Million
Pig:616.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA071191Antibody HPA074390
Glial cells LowLow
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

201.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 201.7
Samples: 246

Max nTPM: 620.0
Min nTPM: 16.7
Std nTPM: 120.3
Median nTPM: 190.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 620.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 570.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 507.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 495.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 481.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 459.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 456.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 451.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 448.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 446.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 440.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 431.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 431.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 430.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 411.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 401.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 393.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 391.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 375.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 375.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 373.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 367.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 367.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 364.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 362.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 358.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 356.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 353.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 351.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 348.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 346.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 340.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 339.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 338.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 337.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 333.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 332.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 331.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 327.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 324.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 314.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 313.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 313.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 304.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 303.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 300.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 297.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 297.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 295.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 295.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 295.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 293.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 293.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 292.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 290.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 289.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 289.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 288.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 286.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 285.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 285.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 285.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 282.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 281.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 280.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 280.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 278.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 275.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 274.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 273.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 273.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 268.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 265.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 263.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 262.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 262.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 260.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 258.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 257.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 257.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 255.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 250.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 248.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 248.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 248.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 248.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 245.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 244.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 243.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 241.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 240.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 240.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 239.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 238.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 235.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 232.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 230.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 229.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 225.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 225.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 224.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 221.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 219.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 219.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 213.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 208.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 208.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 207.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 207.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 207.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 204.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 203.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 203.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 199.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 199.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 199.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 199.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 195.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 194.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 193.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 191.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 191.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 190.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 190.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 190.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 189.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 187.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 187.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 186.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 186.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 185.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 180.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 177.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 176.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 176.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 176.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 175.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 173.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 172.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 170.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 167.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 166.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 166.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 165.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 164.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 163.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 162.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 160.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 159.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 159.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 158.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 155.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 154.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 151.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 150.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 149.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 148.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 147.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 147.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 143.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 141.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 136.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 135.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 135.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 135.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 134.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 130.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 129.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 124.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 116.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 113.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 112.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 112.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 111.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 111.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 106.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 105.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 103.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 103.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 101.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 100.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 99.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 98.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 97.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 96.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 96.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 95.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 91.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 91.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 91.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 89.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 88.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 88.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 88.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 87.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 86.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 86.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 84.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 82.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 80.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 79.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 78.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 76.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 76.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 70.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 70.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 69.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 69.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 68.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 68.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 67.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 65.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 64.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 64.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 60.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 58.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 57.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 56.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 56.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 54.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 52.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 48.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 47.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 47.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 46.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 46.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 44.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 43.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 42.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 41.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 41.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 38.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 36.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 33.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 30.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 27.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 25.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 25.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 24.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 21.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 18.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 16.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

169.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 169.6
FF:10164-103B2 76 years, female 169.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

616.6
Pig sample Sample description nTPM
Caudate
nTPM: 616.6
Samples: 4

Max nTPM: 825.6
Min nTPM: 455.3
Sample A Female 455.3
Sample B Female 602.5
Sample C Male 825.6
Sample D Male 583.0

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