PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:213.5 nTPM
FANTOM5:564.7 Scaled Tags Per Million
Pig:83.4 nTPM
Mouse:25.4 nTPM
Allen mouse:3.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 213.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 143.5
1984 Male, age 76, both hemispheres 154.9
2301 Female, age 85, both hemispheres 141.8
2090 Male, age 80, both hemispheres 140.4
2188 Female, age 91, both hemispheres 136.7
Area postrema
nTPM: 213.5
2799 Male, age 61, both hemispheres 274.1
2054 Male, age 76, both hemispheres 189.4
2306 Male, age 80, both hemispheres 177.0
Dorsal cochlear nucleus
nTPM: 140.0
2378 Male, age 80, both hemispheres 147.2
2058 Male, age 76, both hemispheres 142.8
2187 Female, age 91, both hemispheres 139.5
2802 Male, age 74, right hemisphere 137.9
2370 Male, age 61, both hemispheres 132.4
Dorsal medullary reticular nucleus
nTPM: 131.8
2040 Female, age 85, both hemispheres 134.2
2373 Male, age 61, both hemispheres 132.3
2088 Male, age 76, both hemispheres 128.8
Dorsal motor vagal complex
nTPM: 151.1
2643 Male, age 74, both hemispheres 185.5
2797 Male, age 61, both hemispheres 168.0
2185 Male, age 76, both hemispheres 166.0
2000 Male, age 74, unknown 145.2
2133 Female, age 91, both hemispheres 142.5
2813 Female, age 72, unknown 140.3
2807 Female, age 85, both hemispheres 133.6
2844 Male, age 55, unknown 128.1
Dorsal tegmental nucleus
nTPM: 140.5
2358 Male, age 61, both hemispheres 153.5
2326 Male, age 74, both hemispheres 139.9
2083 Male, age 80, both hemispheres 138.1
1936 Male, age 76, left hemisphere 130.5
Dorsolateral tegmental area
nTPM: 142.1
2337 Male, age 61, both hemispheres 172.1
2654 Male, age 80, both hemispheres 152.2
2360 Male, age 74, both hemispheres 136.1
2141 Male, age 76, both hemispheres 132.4
2751 Female, age 85, both hemispheres 117.4
Gigantocellular reticular nuclei, medullary
nTPM: 137.2
2314 Male, age 61, both hemispheres 151.8
2022 Male, age 76, right hemisphere 148.2
1876 Female, age 85, both hemispheres 133.7
2462 Male, age 74, both hemispheres 131.3
2387 Female, age 91, both hemispheres 129.4
2310 Male, age 80, both hemispheres 128.9
Gigantocellular reticular nuclei, pars
nTPM: 119.4
2084 Female, age 85, both hemispheres 133.7
2336 Male, age 61, both hemispheres 130.7
2706 Male, age 80, both hemispheres 118.2
2330 Male, age 80, both hemispheres 115.7
2168 Male, age 76, both hemispheres 98.6
Inferior olive
nTPM: 163.0
2563 Male, age 74, both hemispheres 193.2
2178 Male, age 61, both hemispheres 168.7
2085 Female, age 85, both hemispheres 162.8
2379 Male, age 80, both hemispheres 147.4
2628 Female, age 91, both hemispheres 142.8
Kolliker-Fuse nucleus
nTPM: 173.6
2315 Male, age 76, right hemisphere 275.4
2163 Male, age 80, both hemispheres 128.6
2793 Female, age 91, left hemisphere 116.9
Lateral lemniscal nuclei
nTPM: 115.0
2036 Male, age 80, both hemispheres 132.4
2320 Female, age 91, left hemisphere 116.3
2746 Female, age 85, left hemisphere 116.2
2453 Male, age 74, right hemisphere 106.9
2169 Male, age 76, both hemispheres 103.1
Lateral medullary reticular nucleus
nTPM: 153.4
2305 Male, age 74, both hemispheres 182.2
2190 Female, age 85, both hemispheres 157.0
2374 Male, age 61, both hemispheres 150.4
2044 Male, age 76, both hemispheres 150.2
2852 Male, age 80, both hemispheres 146.0
2804 Female, age 91, both hemispheres 134.5
Lateral parabrachial nucleus
nTPM: 150.1
2792 Male, age 76, both hemispheres 204.6
2013 Male, age 80, both hemispheres 143.7
2139 Female, age 85, right hemisphere 133.6
2790 Male, age 61, both hemispheres 118.5
Lateral vestibular nucleus
nTPM: 134.5
2311 Male, age 80, both hemispheres 141.4
2184 Male, age 76, both hemispheres 127.7
Locus coeruleus
nTPM: 132.0
2317 Female, age 72, unknown 146.0
1980 Male, age 76, both hemispheres 136.9
2123 Female, age 91, both hemispheres 134.8
2014 Male, age 55, unknown 134.6
2162 Male, age 80, both hemispheres 131.1
2720 Male, age 74, both hemispheres 123.8
2788 Male, age 74, unknown 116.8
Medial olivary nucleus
nTPM: 177.6
1943 Male, age 61, both hemispheres 210.1
1962 Male, age 76, both hemispheres 177.6
2138 Female, age 91, both hemispheres 165.8
2851 Male, age 80, both hemispheres 156.9
Medial parabrachial nucleus
nTPM: 133.6
2156 Male, age 61, both hemispheres 144.6
2854 Male, age 80, both hemispheres 138.0
2170 Female, age 91, both hemispheres 134.9
2463 Female, age 85, right hemisphere 127.1
2786 Male, age 76, both hemispheres 123.6
Medial periolivary nuclei
nTPM: 124.3
2791 Male, age 74, right hemisphere 143.1
2081 Male, age 80, both hemispheres 138.1
2063 Male, age 76, both hemispheres 117.5
2171 Female, age 85, both hemispheres 114.9
2458 Female, age 91, both hemispheres 107.9
Medial vestibular nucleus
nTPM: 136.6
2134 Male, age 76, both hemispheres 157.2
2624 Male, age 61, both hemispheres 141.3
2743 Female, age 85, both hemispheres 139.3
2093 Male, age 80, both hemispheres 133.9
2801 Male, age 74, both hemispheres 129.2
2803 Female, age 91, both hemispheres 119.0
Motor facial nucleus
nTPM: 124.6
2126 Male, age 61, both hemispheres 142.3
2365 Male, age 74, right hemisphere 139.5
2795 Female, age 91, both hemispheres 120.0
2697 Female, age 85, both hemispheres 117.4
2062 Male, age 76, both hemispheres 115.7
2327 Male, age 80, both hemispheres 112.6
Motor hypoglossal nucleus
nTPM: 149.2
2277 Male, age 76, both hemispheres 179.2
2182 Male, age 80, both hemispheres 146.8
2132 Female, age 85, both hemispheres 141.0
2461 Male, age 61, both hemispheres 139.6
2125 Female, age 91, both hemispheres 139.2
Motor trigeminal nucleus
nTPM: 120.4
2335 Male, age 61, both hemispheres 129.8
2321 Female, age 91, both hemispheres 119.6
2079 Male, age 80, both hemispheres 119.2
2309 Male, age 76, both hemispheres 116.7
2560 Male, age 74, both hemispheres 116.5
Nuclei of the trapezoid body
nTPM: 119.3
1983 Male, age 76, both hemispheres 135.2
2166 Male, age 80, both hemispheres 120.7
2159 Male, age 61, both hemispheres 118.7
2735 Female, age 85, both hemispheres 112.6
2368 Female, age 91, both hemispheres 109.2
Nucleus ambiguus
nTPM: 173.1
2071 Male, age 76, both hemispheres 181.6
2096 Female, age 85, both hemispheres 164.7
Nucleus cuneatus
nTPM: 124.7
2380 Male, age 80, both hemispheres 145.3
2564 Male, age 74, both hemispheres 139.6
2562 Male, age 61, both hemispheres 134.4
2376 Male, age 61, both hemispheres 127.7
2808 Female, age 85, both hemispheres 123.8
2381 Male, age 80, both hemispheres 121.0
2131 Male, age 76, both hemispheres 114.2
2100 Male, age 76, both hemispheres 111.9
2805 Female, age 91, both hemispheres 105.0
Nucleus gracilis
nTPM: 152.6
2627 Male, age 74, both hemispheres 172.3
2382 Male, age 80, both hemispheres 146.4
2299 Female, age 85, both hemispheres 139.3
Nucleus raphe magnus
nTPM: 115.9
2455 Male, age 74, both hemispheres 131.1
2328 Male, age 80, both hemispheres 125.2
2459 Female, age 91, both hemispheres 122.4
2172 Female, age 85, both hemispheres 111.0
2160 Male, age 61, both hemispheres 103.8
2051 Male, age 76, both hemispheres 102.0
Nucleus raphe obscurus
nTPM: 164.4
2142 Male, age 76, midline 197.8
2800 Male, age 61, midline 153.7
2845 Female, age 85, midline 141.8
Nucleus raphe pallidus
nTPM: 187.2
1924 Male, age 61, midline 262.2
2145 Male, age 76, midline 157.0
2183 Male, age 80, midline 142.3
Nucleus tractus solitarii
nTPM: 145.5
2144 Female, age 91, right hemisphere 182.0
2191 Female, age 85, both hemispheres 140.2
2656 Male, age 76, both hemispheres 133.6
2307 Male, age 80, both hemispheres 126.3
Paramedian reticular nucleus
nTPM: 132.4
2052 Male, age 76, both hemispheres 151.5
2057 Male, age 80, both hemispheres 130.2
2313 Male, age 61, both hemispheres 127.7
2050 Female, age 85, both hemispheres 120.3
Parvicellular reticular nuclei
nTPM: 119.4
2119 Male, age 80, both hemispheres 143.3
2095 Male, age 76, both hemispheres 115.8
2558 Male, age 74, both hemispheres 99.2
Parvicellular reticular nuclei, medullary
nTPM: 124.1
2091 Female, age 85, both hemispheres 125.3
2189 Female, age 91, both hemispheres 123.9
2181 Male, age 80, left hemisphere 123.1
Pedunculopontine tegmental nucleus
nTPM: 133.0
2338 Male, age 61, both hemispheres 140.1
2334 Male, age 80, both hemispheres 132.0
1921 Female, age 85, both hemispheres 126.8
Peritrigeminal nucleus
nTPM: 162.0
2136 Male, age 76, both hemispheres 178.7
2179 Male, age 61, both hemispheres 160.2
2067 Female, age 85, both hemispheres 147.1
Pontine nuclei
nTPM: 121.6
2109 Female, age 72, unknown 143.7
1863 Male, age 55, unknown 139.8
2115 Male, age 80, left hemisphere 125.8
2454 Male, age 74, left hemisphere 124.4
2319 Female, age 91, both hemispheres 121.3
2787 Female, age 85, both hemispheres 117.8
2727 Male, age 61, right hemisphere 104.4
1968 Male, age 76, left hemisphere 96.0
Pontine raphe nucleus
nTPM: 113.5
2122 Female, age 85, midline 117.2
2853 Male, age 76, midline 109.8
Posteroventral cochlear nucleus
nTPM: 139.2
2135 Female, age 91, both hemispheres 148.1
2341 Male, age 80, both hemispheres 146.4
2371 Male, age 61, both hemispheres 137.7
2070 Male, age 76, both hemispheres 136.2
2752 Female, age 85, both hemispheres 127.8
Prepositus hypoglossal nucleus
nTPM: 137.5
2086 Male, age 80, both hemispheres 145.9
2855 Female, age 85, right hemisphere 129.1
Principal sensory trigeminal nucleus
nTPM: 117.4
2324 Male, age 76, both hemispheres 132.4
2008 Male, age 80, left hemisphere 116.5
2367 Female, age 91, left hemisphere 113.3
2158 Male, age 61, both hemispheres 107.4
Reticular pontine nucleus, caudal
nTPM: 121.0
2092 Male, age 76, both hemispheres 124.0
2559 Male, age 74, both hemispheres 122.2
2457 Female, age 91, both hemispheres 120.6
2332 Male, age 80, right hemisphere 117.0
Reticular pontine nucleus, oral
nTPM: 118.1
1939 Male, age 80, both hemispheres 131.3
2012 Female, age 85, both hemispheres 119.1
2366 Female, age 91, both hemispheres 117.6
2167 Male, age 76, both hemispheres 115.1
2361 Male, age 74, both hemispheres 107.5
Reticulotegmental nucleus
nTPM: 125.6
2333 Male, age 80, both hemispheres 143.2
2452 Male, age 74, both hemispheres 129.6
2322 Female, age 91, both hemispheres 121.1
2325 Male, age 76, both hemispheres 108.7
Spinal trigeminal nucleus, caudal
nTPM: 133.7
2312 Male, age 61, both hemispheres 146.4
2308 Male, age 80, both hemispheres 141.9
2642 Male, age 74, both hemispheres 134.4
2447 Male, age 76, both hemispheres 123.3
2390 Female, age 91, both hemispheres 122.6
Spinal trigeminal nucleus, interpolar
nTPM: 132.5
2066 Male, age 76, right hemisphere 154.3
2033 Male, age 80, both hemispheres 140.8
2625 Male, age 61, both hemispheres 131.8
2389 Female, age 91, both hemispheres 122.6
2386 Female, age 85, both hemispheres 113.0
Spinal trigeminal nucleus, oral
nTPM: 127.4
1978 Male, age 76, both hemispheres 134.4
2164 Male, age 80, both hemispheres 129.1
2737 Female, age 85, both hemispheres 118.6
Spinal vestibular nucleus
nTPM: 128.8
2748 Male, age 76, both hemispheres 136.6
2780 Male, age 80, both hemispheres 132.1
2186 Female, age 91, both hemispheres 128.9
2384 Male, age 74, both hemispheres 126.4
2796 Male, age 61, both hemispheres 124.7
2806 Female, age 85, both hemispheres 124.0
Subcoeruleus area
nTPM: 120.3
2451 Male, age 74, both hemispheres 132.7
2369 Female, age 85, left hemisphere 126.1
1958 Male, age 80, both hemispheres 123.5
2323 Female, age 91, left hemisphere 118.2
2089 Male, age 76, left hemisphere 100.9
Superior olive
nTPM: 123.7
2364 Male, age 74, right hemisphere 159.9
2329 Male, age 80, right hemisphere 127.7
1875 Female, age 85, both hemispheres 111.4
2561 Female, age 91, both hemispheres 110.7
2020 Male, age 76, both hemispheres 109.0
Superior vestibular nucleus
nTPM: 155.4
2061 Male, age 76, both hemispheres 179.9
2383 Male, age 74, both hemispheres 148.3
2015 Male, age 80, both hemispheres 137.9
Ventral medullary reticular nucleus
nTPM: 143.1
2372 Male, age 61, both hemispheres 152.5
2060 Male, age 76, both hemispheres 133.6
Ventral periolivary nuclei
nTPM: 111.4
2023 Male, age 76, both hemispheres 123.5
2165 Male, age 80, both hemispheres 122.3
2130 Female, age 85, both hemispheres 102.5
2794 Female, age 91, left hemisphere 97.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 149.8
1986 Male, age 76, both hemispheres 171.1
2118 Male, age 80, both hemispheres 158.0
2180 Male, age 61, both hemispheres 157.3
2741 Female, age 85, both hemispheres 132.0
2302 Female, age 91, both hemispheres 130.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 129.9
2359 Male, age 61, both hemispheres 175.9
2161 Male, age 80, both hemispheres 132.3
2449 Male, age 74, both hemispheres 123.6
2840 Female, age 85, both hemispheres 120.6
2456 Female, age 91, both hemispheres 119.3
1959 Male, age 76, both hemispheres 107.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 564.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 468.8
FF:10182-103D2 60 years, female 504.7
FF:10165-103B3 76 years, female 432.8
Medulla oblongata
Scaled Tags Per Million: 564.7
FF:10174-103C3 60 years, female 625.0
FF:10038-101F2 18-64 years, mixed 586.1
FF:10155-103A2 76 years, female 482.8
Pons
Scaled Tags Per Million: 445.3
FF:10033-101E6 18-54 years, mixed 445.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 83.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 79.1
Samples: 4

Max nTPM: 104.0
Min nTPM: 70.2
Sample A Female 70.8
Sample B Female 70.2
Sample C Male 71.4
Sample D Male 104.0
Pons
nTPM: 83.5
Samples: 4

Max nTPM: 93.2
Min nTPM: 66.7
Sample A Female 92.8
Sample B Female 66.7
Sample C Male 93.2
Sample D Male 81.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 25.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 25.4
Samples: 4

Max nTPM: 26.0
Min nTPM: 25.0
Sample A Male 25.0
Sample B Male 25.6
Sample C Female 26.0
Sample D Female 25.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.4
2502 Antisense, RP_Baylor_103331, Mouse strain C57BL/6J (56 days, male) 3.4
2501 Antisense, RP_Baylor_103331, Mouse strain C57BL/6J (56 days, male) 0.9
Pons
Expression energy: 2.7
2502 Antisense, RP_Baylor_103331, Mouse strain C57BL/6J (56 days, male) 2.7
2501 Antisense, RP_Baylor_103331, Mouse strain C57BL/6J (56 days, male) 1.2

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