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DDAH1
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  • DDAH1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:83.0 nTPM
FANTOM5:160.6 Scaled Tags Per Million
Pig:103.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006308Antibody HPA071064
Glial cells HighMedium
Neuronal cells HighNot detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 83.0
Samples: 246

Max nTPM: 230.2
Min nTPM: 0.0
Std nTPM: 35.0
Median nTPM: 80.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 230.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 192.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 173.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 171.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 165.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 155.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 154.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 153.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 150.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 149.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 149.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 148.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 147.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 146.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 145.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 139.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 137.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 137.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 134.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 134.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 131.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 130.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 130.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 130.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 130.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 128.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 127.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 127.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 125.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 124.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 124.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 120.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 114.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 114.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 112.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 111.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 111.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 111.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 110.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 110.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 110.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 109.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 109.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 108.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 108.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 108.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 108.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 108.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 107.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 107.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 106.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 105.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 105.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 104.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 104.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 103.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 103.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 102.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 102.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 101.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 101.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 101.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 101.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 101.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 100.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 100.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 98.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 98.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 97.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 97.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 97.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 97.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 97.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 97.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 97.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 96.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 96.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 95.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 95.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 95.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 95.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 95.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 95.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 94.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 94.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 94.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 93.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 93.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 93.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 93.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 93.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 92.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 92.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 91.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 90.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 90.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 90.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 90.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 89.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 89.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 88.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 87.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 86.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 85.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 85.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 85.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 84.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 84.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 84.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 84.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 84.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 83.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 83.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 83.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 83.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 82.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 82.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 82.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 81.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 81.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 81.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 80.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 80.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 80.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 80.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 79.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 79.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 78.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 77.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 77.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 77.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 77.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 77.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 76.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 76.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 76.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 75.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 75.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 75.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 74.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 74.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 74.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 74.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 74.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 73.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 73.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 73.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 73.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 73.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 72.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 72.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 72.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 72.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 71.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 71.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 71.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 70.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 70.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 70.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 69.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 68.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 68.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 68.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 68.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 67.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 67.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 67.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 66.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 66.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 66.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 66.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 65.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 65.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 65.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 65.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 64.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 63.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 63.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 63.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 63.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 63.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 62.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 62.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 62.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 62.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 62.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 61.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 61.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 60.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 60.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 60.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 58.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 58.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 58.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 57.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 57.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 57.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 56.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 56.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 55.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 55.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 55.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 55.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 54.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 54.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 53.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 53.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 52.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 52.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 51.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 51.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 50.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 50.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 50.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 48.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 45.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 40.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 36.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 34.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 33.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 28.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 25.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 25.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 23.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 20.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 19.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 13.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 11.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 10.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 8.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 0.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 0.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 0.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 0.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 0.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

160.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 160.6
FF:10164-103B2 76 years, female 160.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.4
Pig sample Sample description nTPM
Caudate
nTPM: 103.4
Samples: 4

Max nTPM: 125.5
Min nTPM: 81.5
Sample A Female 81.5
Sample B Female 115.5
Sample C Male 125.5
Sample D Male 91.0

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