PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:194.9 nTPM
FANTOM5:301.1 Scaled Tags Per Million
Pig:104.7 nTPM
Mouse:51.5 nTPM
Allen mouse:12.3 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 194.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 104.9
2188 Female, age 91, both hemispheres 128.9
1984 Male, age 76, both hemispheres 104.4
2301 Female, age 85, both hemispheres 100.5
2090 Male, age 80, both hemispheres 85.7
Area postrema
nTPM: 57.7
2306 Male, age 80, both hemispheres 95.7
2799 Male, age 61, both hemispheres 39.9
2054 Male, age 76, both hemispheres 37.7
Dorsal cochlear nucleus
nTPM: 82.6
2802 Male, age 74, right hemisphere 104.6
2187 Female, age 91, both hemispheres 95.4
2378 Male, age 80, both hemispheres 87.1
2058 Male, age 76, both hemispheres 65.1
2370 Male, age 61, both hemispheres 60.7
Dorsal medullary reticular nucleus
nTPM: 73.4
2040 Female, age 85, both hemispheres 90.0
2373 Male, age 61, both hemispheres 75.7
2088 Male, age 76, both hemispheres 54.4
Dorsal motor vagal complex
nTPM: 57.8
2133 Female, age 91, both hemispheres 80.3
2000 Male, age 74, unknown 79.8
2643 Male, age 74, both hemispheres 77.3
2185 Male, age 76, both hemispheres 53.5
2813 Female, age 72, unknown 50.8
2807 Female, age 85, both hemispheres 50.0
2797 Male, age 61, both hemispheres 36.2
2844 Male, age 55, unknown 34.3
Dorsal tegmental nucleus
nTPM: 77.4
2326 Male, age 74, both hemispheres 93.4
2083 Male, age 80, both hemispheres 85.4
1936 Male, age 76, left hemisphere 72.4
2358 Male, age 61, both hemispheres 58.4
Dorsolateral tegmental area
nTPM: 64.2
2654 Male, age 80, both hemispheres 82.7
2751 Female, age 85, both hemispheres 78.2
2360 Male, age 74, both hemispheres 62.5
2337 Male, age 61, both hemispheres 55.6
2141 Male, age 76, both hemispheres 41.9
Gigantocellular reticular nuclei, medullary
nTPM: 105.0
2462 Male, age 74, both hemispheres 162.0
2387 Female, age 91, both hemispheres 142.5
2310 Male, age 80, both hemispheres 101.7
1876 Female, age 85, both hemispheres 87.5
2314 Male, age 61, both hemispheres 70.5
2022 Male, age 76, right hemisphere 66.1
Gigantocellular reticular nuclei, pars
nTPM: 112.0
2168 Male, age 76, both hemispheres 211.2
2706 Male, age 80, both hemispheres 105.7
2330 Male, age 80, both hemispheres 103.9
2336 Male, age 61, both hemispheres 72.5
2084 Female, age 85, both hemispheres 66.9
Inferior olive
nTPM: 71.8
2628 Female, age 91, both hemispheres 105.3
2563 Male, age 74, both hemispheres 90.4
2178 Male, age 61, both hemispheres 66.5
2379 Male, age 80, both hemispheres 50.5
2085 Female, age 85, both hemispheres 46.4
Kolliker-Fuse nucleus
nTPM: 96.2
2793 Female, age 91, left hemisphere 154.4
2163 Male, age 80, both hemispheres 71.7
2315 Male, age 76, right hemisphere 62.7
Lateral lemniscal nuclei
nTPM: 172.6
2169 Male, age 76, both hemispheres 221.7
2036 Male, age 80, both hemispheres 177.7
2453 Male, age 74, right hemisphere 166.5
2320 Female, age 91, left hemisphere 151.4
2746 Female, age 85, left hemisphere 145.9
Lateral medullary reticular nucleus
nTPM: 100.5
2044 Male, age 76, both hemispheres 183.9
2305 Male, age 74, both hemispheres 119.2
2852 Male, age 80, both hemispheres 84.2
2804 Female, age 91, both hemispheres 77.3
2190 Female, age 85, both hemispheres 69.2
2374 Male, age 61, both hemispheres 68.9
Lateral parabrachial nucleus
nTPM: 109.3
2139 Female, age 85, right hemisphere 154.1
2013 Male, age 80, both hemispheres 115.5
2790 Male, age 61, both hemispheres 84.0
2792 Male, age 76, both hemispheres 83.6
Lateral vestibular nucleus
nTPM: 67.5
2311 Male, age 80, both hemispheres 67.8
2184 Male, age 76, both hemispheres 67.2
Locus coeruleus
nTPM: 55.5
2720 Male, age 74, both hemispheres 79.2
2162 Male, age 80, both hemispheres 58.2
2123 Female, age 91, both hemispheres 57.7
2788 Male, age 74, unknown 54.4
2317 Female, age 72, unknown 49.4
2014 Male, age 55, unknown 49.3
1980 Male, age 76, both hemispheres 40.0
Medial olivary nucleus
nTPM: 82.7
2851 Male, age 80, both hemispheres 90.6
1943 Male, age 61, both hemispheres 90.4
2138 Female, age 91, both hemispheres 79.3
1962 Male, age 76, both hemispheres 70.4
Medial parabrachial nucleus
nTPM: 73.2
2854 Male, age 80, both hemispheres 103.3
2170 Female, age 91, both hemispheres 84.8
2156 Male, age 61, both hemispheres 68.2
2463 Female, age 85, right hemisphere 63.7
2786 Male, age 76, both hemispheres 45.7
Medial periolivary nuclei
nTPM: 165.6
2063 Male, age 76, both hemispheres 226.5
2171 Female, age 85, both hemispheres 226.0
2791 Male, age 74, right hemisphere 142.6
2458 Female, age 91, both hemispheres 129.5
2081 Male, age 80, both hemispheres 103.4
Medial vestibular nucleus
nTPM: 97.3
2803 Female, age 91, both hemispheres 126.6
2801 Male, age 74, both hemispheres 117.9
2743 Female, age 85, both hemispheres 103.3
2093 Male, age 80, both hemispheres 88.9
2624 Male, age 61, both hemispheres 82.5
2134 Male, age 76, both hemispheres 64.6
Motor facial nucleus
nTPM: 155.9
2062 Male, age 76, both hemispheres 231.7
2365 Male, age 74, right hemisphere 170.5
2697 Female, age 85, both hemispheres 160.7
2327 Male, age 80, both hemispheres 143.7
2795 Female, age 91, both hemispheres 140.9
2126 Male, age 61, both hemispheres 88.1
Motor hypoglossal nucleus
nTPM: 76.2
2125 Female, age 91, both hemispheres 128.0
2132 Female, age 85, both hemispheres 87.3
2182 Male, age 80, both hemispheres 77.1
2461 Male, age 61, both hemispheres 60.9
2277 Male, age 76, both hemispheres 27.6
Motor trigeminal nucleus
nTPM: 101.9
2560 Male, age 74, both hemispheres 141.9
2079 Male, age 80, both hemispheres 134.5
2321 Female, age 91, both hemispheres 109.4
2335 Male, age 61, both hemispheres 63.2
2309 Male, age 76, both hemispheres 60.3
Nuclei of the trapezoid body
nTPM: 194.9
2159 Male, age 61, both hemispheres 280.9
1983 Male, age 76, both hemispheres 207.4
2735 Female, age 85, both hemispheres 206.0
2368 Female, age 91, both hemispheres 146.3
2166 Male, age 80, both hemispheres 133.7
Nucleus ambiguus
nTPM: 54.1
2071 Male, age 76, both hemispheres 56.5
2096 Female, age 85, both hemispheres 51.7
Nucleus cuneatus
nTPM: 82.7
2131 Male, age 76, both hemispheres 106.3
2376 Male, age 61, both hemispheres 101.5
2380 Male, age 80, both hemispheres 92.7
2564 Male, age 74, both hemispheres 87.6
2381 Male, age 80, both hemispheres 87.1
2805 Female, age 91, both hemispheres 77.3
2100 Male, age 76, both hemispheres 72.3
2808 Female, age 85, both hemispheres 68.2
2562 Male, age 61, both hemispheres 51.2
Nucleus gracilis
nTPM: 101.8
2382 Male, age 80, both hemispheres 120.2
2627 Male, age 74, both hemispheres 109.7
2299 Female, age 85, both hemispheres 75.5
Nucleus raphe magnus
nTPM: 188.5
2160 Male, age 61, both hemispheres 253.5
2172 Female, age 85, both hemispheres 223.1
2051 Male, age 76, both hemispheres 177.3
2455 Male, age 74, both hemispheres 171.1
2459 Female, age 91, both hemispheres 155.0
2328 Male, age 80, both hemispheres 151.1
Nucleus raphe obscurus
nTPM: 67.6
2845 Female, age 85, midline 81.4
2800 Male, age 61, midline 74.2
2142 Male, age 76, midline 47.2
Nucleus raphe pallidus
nTPM: 82.0
1924 Male, age 61, midline 105.7
2183 Male, age 80, midline 78.8
2145 Male, age 76, midline 61.6
Nucleus tractus solitarii
nTPM: 48.8
2144 Female, age 91, right hemisphere 90.4
2307 Male, age 80, both hemispheres 37.5
2656 Male, age 76, both hemispheres 35.5
2191 Female, age 85, both hemispheres 31.8
Paramedian reticular nucleus
nTPM: 108.6
2050 Female, age 85, both hemispheres 198.4
2057 Male, age 80, both hemispheres 85.8
2052 Male, age 76, both hemispheres 80.2
2313 Male, age 61, both hemispheres 70.0
Parvicellular reticular nuclei
nTPM: 120.6
2558 Male, age 74, both hemispheres 144.6
2095 Male, age 76, both hemispheres 140.2
2119 Male, age 80, both hemispheres 77.0
Parvicellular reticular nuclei, medullary
nTPM: 77.8
2189 Female, age 91, both hemispheres 97.3
2091 Female, age 85, both hemispheres 69.4
2181 Male, age 80, left hemisphere 66.6
Pedunculopontine tegmental nucleus
nTPM: 74.3
2338 Male, age 61, both hemispheres 88.6
1921 Female, age 85, both hemispheres 67.5
2334 Male, age 80, both hemispheres 66.6
Peritrigeminal nucleus
nTPM: 139.5
2136 Male, age 76, both hemispheres 162.4
2179 Male, age 61, both hemispheres 150.6
2067 Female, age 85, both hemispheres 105.7
Pontine nuclei
nTPM: 187.9
1863 Male, age 55, unknown 251.1
2727 Male, age 61, right hemisphere 240.2
2787 Female, age 85, both hemispheres 197.6
1968 Male, age 76, left hemisphere 196.5
2109 Female, age 72, unknown 189.9
2454 Male, age 74, left hemisphere 187.7
2319 Female, age 91, both hemispheres 133.4
2115 Male, age 80, left hemisphere 106.8
Pontine raphe nucleus
nTPM: 101.6
2122 Female, age 85, midline 154.0
2853 Male, age 76, midline 49.2
Posteroventral cochlear nucleus
nTPM: 94.5
2135 Female, age 91, both hemispheres 114.6
2341 Male, age 80, both hemispheres 97.9
2752 Female, age 85, both hemispheres 94.3
2070 Male, age 76, both hemispheres 90.4
2371 Male, age 61, both hemispheres 75.4
Prepositus hypoglossal nucleus
nTPM: 78.4
2855 Female, age 85, right hemisphere 87.6
2086 Male, age 80, both hemispheres 69.1
Principal sensory trigeminal nucleus
nTPM: 141.2
2158 Male, age 61, both hemispheres 211.7
2008 Male, age 80, left hemisphere 153.6
2367 Female, age 91, left hemisphere 142.0
2324 Male, age 76, both hemispheres 57.3
Reticular pontine nucleus, caudal
nTPM: 143.7
2092 Male, age 76, both hemispheres 156.4
2457 Female, age 91, both hemispheres 148.9
2332 Male, age 80, right hemisphere 143.0
2559 Male, age 74, both hemispheres 126.5
Reticular pontine nucleus, oral
nTPM: 122.1
2361 Male, age 74, both hemispheres 170.3
2012 Female, age 85, both hemispheres 148.6
2366 Female, age 91, both hemispheres 147.9
1939 Male, age 80, both hemispheres 81.6
2167 Male, age 76, both hemispheres 62.0
Reticulotegmental nucleus
nTPM: 107.8
2452 Male, age 74, both hemispheres 118.6
2325 Male, age 76, both hemispheres 109.9
2322 Female, age 91, both hemispheres 101.7
2333 Male, age 80, both hemispheres 101.0
Spinal trigeminal nucleus, caudal
nTPM: 89.6
2390 Female, age 91, both hemispheres 98.7
2642 Male, age 74, both hemispheres 98.2
2312 Male, age 61, both hemispheres 90.9
2447 Male, age 76, both hemispheres 83.8
2308 Male, age 80, both hemispheres 76.6
Spinal trigeminal nucleus, interpolar
nTPM: 113.5
2066 Male, age 76, right hemisphere 222.6
2389 Female, age 91, both hemispheres 142.6
2386 Female, age 85, both hemispheres 79.8
2033 Male, age 80, both hemispheres 70.2
2625 Male, age 61, both hemispheres 52.1
Spinal trigeminal nucleus, oral
nTPM: 66.1
2164 Male, age 80, both hemispheres 74.0
2737 Female, age 85, both hemispheres 63.4
1978 Male, age 76, both hemispheres 60.9
Spinal vestibular nucleus
nTPM: 91.2
2186 Female, age 91, both hemispheres 117.9
2384 Male, age 74, both hemispheres 115.3
2806 Female, age 85, both hemispheres 89.9
2748 Male, age 76, both hemispheres 83.3
2780 Male, age 80, both hemispheres 73.7
2796 Male, age 61, both hemispheres 67.2
Subcoeruleus area
nTPM: 97.8
2089 Male, age 76, left hemisphere 142.0
1958 Male, age 80, both hemispheres 113.0
2369 Female, age 85, left hemisphere 90.9
2451 Male, age 74, both hemispheres 74.3
2323 Female, age 91, left hemisphere 68.6
Superior olive
nTPM: 154.4
1875 Female, age 85, both hemispheres 200.7
2020 Male, age 76, both hemispheres 154.8
2364 Male, age 74, right hemisphere 149.4
2561 Female, age 91, both hemispheres 137.7
2329 Male, age 80, right hemisphere 129.3
Superior vestibular nucleus
nTPM: 64.2
2383 Male, age 74, both hemispheres 69.3
2015 Male, age 80, both hemispheres 68.2
2061 Male, age 76, both hemispheres 55.0
Ventral medullary reticular nucleus
nTPM: 69.0
2372 Male, age 61, both hemispheres 72.5
2060 Male, age 76, both hemispheres 65.5
Ventral periolivary nuclei
nTPM: 158.4
2130 Female, age 85, both hemispheres 189.4
2165 Male, age 80, both hemispheres 167.2
2023 Male, age 76, both hemispheres 147.9
2794 Female, age 91, left hemisphere 128.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 117.1
1986 Male, age 76, both hemispheres 187.2
2741 Female, age 85, both hemispheres 128.3
2302 Female, age 91, both hemispheres 100.9
2118 Male, age 80, both hemispheres 91.7
2180 Male, age 61, both hemispheres 77.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 131.5
2449 Male, age 74, both hemispheres 165.9
1959 Male, age 76, both hemispheres 163.6
2456 Female, age 91, both hemispheres 130.6
2161 Male, age 80, both hemispheres 126.6
2840 Female, age 85, both hemispheres 118.9
2359 Male, age 61, both hemispheres 83.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 301.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 135.2
FF:10182-103D2 60 years, female 144.1
FF:10165-103B3 76 years, female 126.4
Medulla oblongata
Scaled Tags Per Million: 106.0
FF:10038-101F2 18-64 years, mixed 135.7
FF:10155-103A2 76 years, female 100.4
FF:10174-103C3 60 years, female 81.9
Pons
Scaled Tags Per Million: 301.1
FF:10033-101E6 18-54 years, mixed 301.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 104.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 58.5
Samples: 4

Max nTPM: 74.5
Min nTPM: 42.0
Sample A Female 74.5
Sample B Female 63.6
Sample C Male 53.8
Sample D Male 42.0
Pons
nTPM: 104.8
Samples: 4

Max nTPM: 206.5
Min nTPM: 36.9
Sample A Female 206.5
Sample B Female 36.9
Sample C Male 37.0
Sample D Male 138.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 51.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 51.5
Samples: 4

Max nTPM: 56.0
Min nTPM: 45.9
Sample A Male 52.8
Sample B Male 56.0
Sample C Female 45.9
Sample D Female 51.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 12.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.3
71924238 Antisense, RP_050607_03_F01, Mouse strain C57BL/6J (56 days, male) 12.3
70302093 Antisense, RP_050607_03_F01, Mouse strain C57BL/6J (56 days, male) 11.9
Pons
Expression energy: 10.9
71924238 Antisense, RP_050607_03_F01, Mouse strain C57BL/6J (56 days, male) 10.9
70302093 Antisense, RP_050607_03_F01, Mouse strain C57BL/6J (56 days, male) 8.9

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