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  • KIF5A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:268.0 nTPM
FANTOM5:489.8 Scaled Tags Per Million
Pig:173.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA004469
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 268.0
Samples: 246

Max nTPM: 739.8
Min nTPM: 32.1
Std nTPM: 127.4
Median nTPM: 245.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 739.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 713.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 700.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 697.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 659.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 648.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 567.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 565.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 546.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 528.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 515.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 510.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 499.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 488.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 485.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 482.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 479.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 478.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 464.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 460.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 455.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 445.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 444.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 443.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 438.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 438.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 420.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 419.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 415.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 413.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 411.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 408.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 400.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 395.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 391.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 390.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 390.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 386.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 385.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 380.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 376.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 374.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 373.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 370.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 368.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 366.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 363.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 362.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 360.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 356.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 356.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 354.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 354.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 351.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 345.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 345.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 344.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 344.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 342.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 342.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 340.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 339.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 338.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 336.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 328.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 328.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 328.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 324.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 322.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 318.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 317.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 314.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 314.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 313.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 313.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 306.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 306.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 305.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 305.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 303.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 303.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 302.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 297.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 296.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 296.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 296.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 294.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 290.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 289.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 286.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 282.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 281.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 279.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 279.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 278.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 277.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 277.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 276.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 274.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 273.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 272.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 271.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 270.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 267.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 266.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 265.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 264.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 260.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 259.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 259.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 258.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 257.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 253.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 253.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 253.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 251.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 251.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 249.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 249.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 247.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 247.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 247.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 245.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 245.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 240.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 239.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 239.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 237.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 236.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 235.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 235.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 234.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 233.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 233.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 232.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 231.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 230.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 230.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 227.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 226.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 226.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 226.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 224.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 224.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 223.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 220.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 218.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 218.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 217.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 216.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 215.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 214.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 214.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 211.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 209.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 208.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 208.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 206.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 206.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 203.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 203.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 203.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 203.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 202.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 202.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 201.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 201.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 200.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 199.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 199.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 198.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 197.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 197.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 196.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 196.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 195.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 193.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 191.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 190.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 190.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 188.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 187.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 187.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 186.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 183.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 181.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 179.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 178.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 178.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 176.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 174.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 174.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 171.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 170.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 170.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 169.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 167.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 166.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 166.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 165.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 165.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 164.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 159.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 157.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 156.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 152.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 148.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 148.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 146.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 145.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 144.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 143.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 143.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 136.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 135.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 134.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 134.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 133.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 130.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 129.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 129.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 128.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 127.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 125.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 119.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 115.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 114.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 110.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 110.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 109.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 108.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 102.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 100.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 99.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 95.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 93.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 87.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 86.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 86.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 84.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 82.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 72.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 70.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 59.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 38.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 32.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

489.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 489.8
FF:10164-103B2 76 years, female 489.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.8
Pig sample Sample description nTPM
Caudate
nTPM: 173.8
Samples: 4

Max nTPM: 202.2
Min nTPM: 152.5
Sample A Female 152.5
Sample B Female 175.5
Sample C Male 202.2
Sample D Male 164.9

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