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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:242.2 nTPM
FANTOM5:759.5 Scaled Tags Per Million
Pig:615.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003140Antibody CAB062566Antibody CAB068245
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumMediumMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

242.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 242.2
Samples: 246

Max nTPM: 611.2
Min nTPM: 32.3
Std nTPM: 112.4
Median nTPM: 237.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 611.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 609.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 570.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 503.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 496.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 485.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 479.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 469.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 466.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 461.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 451.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 445.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 430.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 430.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 422.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 420.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 419.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 414.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 413.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 411.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 410.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 401.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 400.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 393.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 390.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 388.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 388.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 386.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 385.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 382.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 376.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 375.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 371.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 371.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 366.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 362.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 358.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 357.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 350.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 350.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 348.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 346.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 344.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 341.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 341.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 339.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 337.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 336.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 335.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 332.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 331.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 330.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 329.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 323.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 322.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 321.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 319.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 319.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 318.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 317.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 317.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 317.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 316.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 315.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 315.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 313.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 313.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 312.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 309.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 307.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 307.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 306.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 305.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 299.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 298.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 298.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 296.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 295.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 293.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 288.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 287.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 283.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 281.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 280.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 278.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 278.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 277.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 276.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 274.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 273.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 272.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 269.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 268.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 268.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 266.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 265.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 265.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 264.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 263.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 263.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 263.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 260.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 260.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 258.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 257.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 256.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 256.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 255.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 255.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 254.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 252.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 252.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 251.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 250.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 248.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 245.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 244.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 243.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 241.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 241.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 240.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 239.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 237.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 237.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 235.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 229.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 228.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 227.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 225.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 224.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 223.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 221.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 221.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 219.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 217.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 217.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 216.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 216.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 212.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 211.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 210.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 210.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 208.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 208.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 207.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 207.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 204.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 203.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 203.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 202.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 197.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 197.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 196.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 195.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 194.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 194.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 193.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 193.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 191.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 190.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 188.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 187.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 186.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 185.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 185.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 181.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 179.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 177.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 177.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 176.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 176.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 175.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 175.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 174.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 173.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 172.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 167.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 166.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 164.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 162.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 162.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 161.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 159.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 157.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 156.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 155.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 154.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 150.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 147.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 145.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 142.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 142.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 140.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 139.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 139.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 139.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 138.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 138.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 136.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 134.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 134.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 132.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 131.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 129.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 129.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 121.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 117.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 116.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 115.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 114.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 113.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 113.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 112.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 111.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 111.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 108.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 107.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 105.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 105.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 103.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 103.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 102.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 100.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 99.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 96.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 94.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 94.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 91.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 90.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 86.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 86.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 84.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 82.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 81.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 76.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 72.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 72.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 68.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 65.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 64.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 50.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 42.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 32.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

759.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 759.5
FF:10164-103B2 76 years, female 759.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

615.3
Pig sample Sample description nTPM
Caudate
nTPM: 615.3
Samples: 4

Max nTPM: 781.9
Min nTPM: 483.0
Sample A Female 483.0
Sample B Female 599.4
Sample C Male 781.9
Sample D Male 596.7

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