PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		100.375
Mouse brain, Intensity
Ponsi 		101.091
RNA expressioni
HPA Brain:183.8 nTPM
FANTOM5:231.6 Scaled Tags Per Million
Pig:71.4 nTPM
Mouse:98.1 nTPM
Allen mouse:8.1 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA061689
Medulla oblongata mean intensity 100.375
intensityi
FRONT BACK
Nucleus of the solitary tract 31.171
Raphe magnus nucleus 62.481
Cochlear nucleus 50.761
Lateral paragigantocellular nucleus 40.204
Raphe pallidus nucleus 100.375
Facial nucleus 58.112
Hypoglossal nucleus 64.234
Ambiguus nucleus 52.527
External cuneate nucleus 38.679
Inferior olivary nucleus 38.628
Raphe obscures nucleus 42.123
Dorsal motor nucleus of vagus 42.972
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 68.633
Parabrachial nucleus 34.338
Principle sensory trigeminal nucleus 51.403
Locus coeruleus 101.091
Pontine nucleus 55.624
Vestibular nucleus 32.524
Pontine reticular nucleus, oral 42.759
Lateral lemniscus 36.567
Superior paraolivary nucleus 65.004

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 183.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 95.4
1984 Male, age 76, both hemispheres 103.6
2188 Female, age 91, both hemispheres 102.1
2301 Female, age 85, both hemispheres 98.5
2090 Male, age 80, both hemispheres 77.7
Area postrema
nTPM: 50.0
2054 Male, age 76, both hemispheres 83.3
2306 Male, age 80, both hemispheres 37.9
2799 Male, age 61, both hemispheres 28.8
Dorsal cochlear nucleus
nTPM: 72.2
2187 Female, age 91, both hemispheres 89.9
2058 Male, age 76, both hemispheres 81.9
2370 Male, age 61, both hemispheres 73.7
2802 Male, age 74, right hemisphere 62.3
2378 Male, age 80, both hemispheres 53.3
Dorsal medullary reticular nucleus
nTPM: 106.1
2040 Female, age 85, both hemispheres 135.2
2373 Male, age 61, both hemispheres 101.2
2088 Male, age 76, both hemispheres 81.9
Dorsal motor vagal complex
nTPM: 90.0
2133 Female, age 91, both hemispheres 138.9
2000 Male, age 74, unknown 126.6
2844 Male, age 55, unknown 113.6
2813 Female, age 72, unknown 100.9
2807 Female, age 85, both hemispheres 68.6
2643 Male, age 74, both hemispheres 58.5
2185 Male, age 76, both hemispheres 57.7
2797 Male, age 61, both hemispheres 55.3
Dorsal tegmental nucleus
nTPM: 85.9
2083 Male, age 80, both hemispheres 99.4
2358 Male, age 61, both hemispheres 83.3
1936 Male, age 76, left hemisphere 80.7
2326 Male, age 74, both hemispheres 80.0
Dorsolateral tegmental area
nTPM: 81.4
2654 Male, age 80, both hemispheres 96.2
2141 Male, age 76, both hemispheres 91.2
2751 Female, age 85, both hemispheres 90.1
2360 Male, age 74, both hemispheres 70.5
2337 Male, age 61, both hemispheres 58.7
Gigantocellular reticular nuclei, medullary
nTPM: 102.6
2462 Male, age 74, both hemispheres 127.2
2314 Male, age 61, both hemispheres 109.7
2310 Male, age 80, both hemispheres 104.9
1876 Female, age 85, both hemispheres 100.8
2387 Female, age 91, both hemispheres 86.9
2022 Male, age 76, right hemisphere 86.0
Gigantocellular reticular nuclei, pars
nTPM: 119.4
2168 Male, age 76, both hemispheres 145.9
2336 Male, age 61, both hemispheres 126.6
2084 Female, age 85, both hemispheres 120.8
2330 Male, age 80, both hemispheres 103.1
2706 Male, age 80, both hemispheres 100.4
Inferior olive
nTPM: 88.6
2085 Female, age 85, both hemispheres 127.2
2178 Male, age 61, both hemispheres 89.2
2628 Female, age 91, both hemispheres 85.5
2563 Male, age 74, both hemispheres 76.8
2379 Male, age 80, both hemispheres 64.1
Kolliker-Fuse nucleus
nTPM: 98.8
2163 Male, age 80, both hemispheres 122.9
2793 Female, age 91, left hemisphere 112.1
2315 Male, age 76, right hemisphere 61.4
Lateral lemniscal nuclei
nTPM: 127.3
2453 Male, age 74, right hemisphere 139.5
2169 Male, age 76, both hemispheres 136.4
2036 Male, age 80, both hemispheres 127.7
2746 Female, age 85, left hemisphere 119.4
2320 Female, age 91, left hemisphere 113.5
Lateral medullary reticular nucleus
nTPM: 107.5
2374 Male, age 61, both hemispheres 130.0
2044 Male, age 76, both hemispheres 124.8
2190 Female, age 85, both hemispheres 109.1
2305 Male, age 74, both hemispheres 107.6
2804 Female, age 91, both hemispheres 102.1
2852 Male, age 80, both hemispheres 71.6
Lateral parabrachial nucleus
nTPM: 93.5
2139 Female, age 85, right hemisphere 124.6
2790 Male, age 61, both hemispheres 99.2
2013 Male, age 80, both hemispheres 86.0
2792 Male, age 76, both hemispheres 64.3
Lateral vestibular nucleus
nTPM: 95.2
2184 Male, age 76, both hemispheres 111.9
2311 Male, age 80, both hemispheres 78.6
Locus coeruleus
nTPM: 183.8
2014 Male, age 55, unknown 226.2
2123 Female, age 91, both hemispheres 208.5
2720 Male, age 74, both hemispheres 208.5
2788 Male, age 74, unknown 179.6
1980 Male, age 76, both hemispheres 171.7
2162 Male, age 80, both hemispheres 151.0
2317 Female, age 72, unknown 141.2
Medial olivary nucleus
nTPM: 73.7
1962 Male, age 76, both hemispheres 80.1
2851 Male, age 80, both hemispheres 72.0
1943 Male, age 61, both hemispheres 71.8
2138 Female, age 91, both hemispheres 70.8
Medial parabrachial nucleus
nTPM: 97.1
2156 Male, age 61, both hemispheres 104.2
2854 Male, age 80, both hemispheres 101.8
2170 Female, age 91, both hemispheres 98.8
2786 Male, age 76, both hemispheres 91.3
2463 Female, age 85, right hemisphere 89.2
Medial periolivary nuclei
nTPM: 122.7
2171 Female, age 85, both hemispheres 168.0
2063 Male, age 76, both hemispheres 149.2
2458 Female, age 91, both hemispheres 104.6
2791 Male, age 74, right hemisphere 102.1
2081 Male, age 80, both hemispheres 89.4
Medial vestibular nucleus
nTPM: 114.5
2134 Male, age 76, both hemispheres 132.3
2801 Male, age 74, both hemispheres 118.8
2743 Female, age 85, both hemispheres 115.2
2624 Male, age 61, both hemispheres 109.3
2093 Male, age 80, both hemispheres 107.1
2803 Female, age 91, both hemispheres 104.0
Motor facial nucleus
nTPM: 119.7
2062 Male, age 76, both hemispheres 151.3
2327 Male, age 80, both hemispheres 132.7
2365 Male, age 74, right hemisphere 125.3
2697 Female, age 85, both hemispheres 120.2
2126 Male, age 61, both hemispheres 99.8
2795 Female, age 91, both hemispheres 89.1
Motor hypoglossal nucleus
nTPM: 119.3
2461 Male, age 61, both hemispheres 152.9
2132 Female, age 85, both hemispheres 126.1
2125 Female, age 91, both hemispheres 123.4
2182 Male, age 80, both hemispheres 102.6
2277 Male, age 76, both hemispheres 91.6
Motor trigeminal nucleus
nTPM: 103.0
2079 Male, age 80, both hemispheres 129.1
2321 Female, age 91, both hemispheres 105.2
2560 Male, age 74, both hemispheres 96.8
2309 Male, age 76, both hemispheres 93.0
2335 Male, age 61, both hemispheres 90.8
Nuclei of the trapezoid body
nTPM: 142.5
2159 Male, age 61, both hemispheres 184.6
2735 Female, age 85, both hemispheres 171.8
1983 Male, age 76, both hemispheres 141.7
2166 Male, age 80, both hemispheres 113.9
2368 Female, age 91, both hemispheres 100.3
Nucleus ambiguus
nTPM: 105.6
2096 Female, age 85, both hemispheres 119.7
2071 Male, age 76, both hemispheres 91.4
Nucleus cuneatus
nTPM: 71.0
2131 Male, age 76, both hemispheres 98.8
2376 Male, age 61, both hemispheres 87.9
2562 Male, age 61, both hemispheres 80.8
2100 Male, age 76, both hemispheres 78.6
2564 Male, age 74, both hemispheres 71.8
2381 Male, age 80, both hemispheres 61.8
2805 Female, age 91, both hemispheres 55.8
2808 Female, age 85, both hemispheres 54.2
2380 Male, age 80, both hemispheres 48.9
Nucleus gracilis
nTPM: 54.8
2627 Male, age 74, both hemispheres 76.5
2382 Male, age 80, both hemispheres 53.2
2299 Female, age 85, both hemispheres 34.8
Nucleus raphe magnus
nTPM: 144.6
2160 Male, age 61, both hemispheres 187.7
2172 Female, age 85, both hemispheres 183.6
2455 Male, age 74, both hemispheres 148.4
2328 Male, age 80, both hemispheres 123.7
2051 Male, age 76, both hemispheres 112.4
2459 Female, age 91, both hemispheres 111.7
Nucleus raphe obscurus
nTPM: 107.4
2800 Male, age 61, midline 141.7
2845 Female, age 85, midline 114.1
2142 Male, age 76, midline 66.4
Nucleus raphe pallidus
nTPM: 92.0
2183 Male, age 80, midline 118.8
1924 Male, age 61, midline 90.3
2145 Male, age 76, midline 66.8
Nucleus tractus solitarii
nTPM: 90.5
2144 Female, age 91, right hemisphere 95.6
2307 Male, age 80, both hemispheres 91.3
2656 Male, age 76, both hemispheres 90.8
2191 Female, age 85, both hemispheres 84.3
Paramedian reticular nucleus
nTPM: 126.5
2050 Female, age 85, both hemispheres 145.1
2313 Male, age 61, both hemispheres 143.6
2057 Male, age 80, both hemispheres 124.8
2052 Male, age 76, both hemispheres 92.5
Parvicellular reticular nuclei
nTPM: 110.0
2558 Male, age 74, both hemispheres 115.8
2119 Male, age 80, both hemispheres 109.5
2095 Male, age 76, both hemispheres 104.6
Parvicellular reticular nuclei, medullary
nTPM: 108.8
2091 Female, age 85, both hemispheres 116.3
2189 Female, age 91, both hemispheres 115.8
2181 Male, age 80, left hemisphere 94.3
Pedunculopontine tegmental nucleus
nTPM: 100.7
2334 Male, age 80, both hemispheres 121.0
1921 Female, age 85, both hemispheres 104.6
2338 Male, age 61, both hemispheres 76.6
Peritrigeminal nucleus
nTPM: 109.6
2179 Male, age 61, both hemispheres 124.6
2136 Male, age 76, both hemispheres 106.5
2067 Female, age 85, both hemispheres 97.8
Pontine nuclei
nTPM: 136.9
2727 Male, age 61, right hemisphere 182.0
1863 Male, age 55, unknown 167.0
2787 Female, age 85, both hemispheres 161.8
2109 Female, age 72, unknown 139.4
1968 Male, age 76, left hemisphere 129.0
2454 Male, age 74, left hemisphere 118.2
2319 Female, age 91, both hemispheres 100.6
2115 Male, age 80, left hemisphere 97.1
Pontine raphe nucleus
nTPM: 134.1
2122 Female, age 85, midline 138.8
2853 Male, age 76, midline 129.3
Posteroventral cochlear nucleus
nTPM: 84.2
2752 Female, age 85, both hemispheres 118.9
2070 Male, age 76, both hemispheres 95.4
2135 Female, age 91, both hemispheres 76.4
2371 Male, age 61, both hemispheres 69.4
2341 Male, age 80, both hemispheres 60.9
Prepositus hypoglossal nucleus
nTPM: 93.8
2855 Female, age 85, right hemisphere 103.8
2086 Male, age 80, both hemispheres 83.8
Principal sensory trigeminal nucleus
nTPM: 129.6
2158 Male, age 61, both hemispheres 168.7
2008 Male, age 80, left hemisphere 139.8
2367 Female, age 91, left hemisphere 107.7
2324 Male, age 76, both hemispheres 102.0
Reticular pontine nucleus, caudal
nTPM: 114.5
2332 Male, age 80, right hemisphere 139.1
2092 Male, age 76, both hemispheres 115.3
2457 Female, age 91, both hemispheres 105.1
2559 Male, age 74, both hemispheres 98.6
Reticular pontine nucleus, oral
nTPM: 107.0
2361 Male, age 74, both hemispheres 127.6
2012 Female, age 85, both hemispheres 125.9
2366 Female, age 91, both hemispheres 103.5
1939 Male, age 80, both hemispheres 90.6
2167 Male, age 76, both hemispheres 87.3
Reticulotegmental nucleus
nTPM: 106.8
2325 Male, age 76, both hemispheres 125.1
2333 Male, age 80, both hemispheres 106.4
2322 Female, age 91, both hemispheres 99.1
2452 Male, age 74, both hemispheres 96.7
Spinal trigeminal nucleus, caudal
nTPM: 97.5
2390 Female, age 91, both hemispheres 136.8
2642 Male, age 74, both hemispheres 92.8
2447 Male, age 76, both hemispheres 91.6
2312 Male, age 61, both hemispheres 86.4
2308 Male, age 80, both hemispheres 80.1
Spinal trigeminal nucleus, interpolar
nTPM: 129.6
2625 Male, age 61, both hemispheres 184.6
2066 Male, age 76, right hemisphere 153.3
2389 Female, age 91, both hemispheres 111.4
2033 Male, age 80, both hemispheres 106.6
2386 Female, age 85, both hemispheres 92.3
Spinal trigeminal nucleus, oral
nTPM: 104.2
2737 Female, age 85, both hemispheres 113.4
2164 Male, age 80, both hemispheres 110.8
1978 Male, age 76, both hemispheres 88.3
Spinal vestibular nucleus
nTPM: 99.3
2186 Female, age 91, both hemispheres 115.2
2780 Male, age 80, both hemispheres 106.9
2748 Male, age 76, both hemispheres 97.9
2384 Male, age 74, both hemispheres 93.8
2806 Female, age 85, both hemispheres 92.4
2796 Male, age 61, both hemispheres 89.6
Subcoeruleus area
nTPM: 102.9
2323 Female, age 91, left hemisphere 120.3
1958 Male, age 80, both hemispheres 117.1
2089 Male, age 76, left hemisphere 109.5
2451 Male, age 74, both hemispheres 91.1
2369 Female, age 85, left hemisphere 76.5
Superior olive
nTPM: 117.6
1875 Female, age 85, both hemispheres 147.3
2329 Male, age 80, right hemisphere 119.1
2020 Male, age 76, both hemispheres 110.3
2364 Male, age 74, right hemisphere 108.5
2561 Female, age 91, both hemispheres 103.0
Superior vestibular nucleus
nTPM: 74.7
2015 Male, age 80, both hemispheres 85.8
2061 Male, age 76, both hemispheres 78.7
2383 Male, age 74, both hemispheres 59.6
Ventral medullary reticular nucleus
nTPM: 104.4
2372 Male, age 61, both hemispheres 111.3
2060 Male, age 76, both hemispheres 97.5
Ventral periolivary nuclei
nTPM: 135.0
2130 Female, age 85, both hemispheres 155.2
2165 Male, age 80, both hemispheres 152.5
2794 Female, age 91, left hemisphere 125.2
2023 Male, age 76, both hemispheres 107.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 108.7
2180 Male, age 61, both hemispheres 125.3
2741 Female, age 85, both hemispheres 117.5
1986 Male, age 76, both hemispheres 114.4
2302 Female, age 91, both hemispheres 100.1
2118 Male, age 80, both hemispheres 86.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 110.0
2449 Male, age 74, both hemispheres 139.6
1959 Male, age 76, both hemispheres 113.7
2359 Male, age 61, both hemispheres 111.7
2161 Male, age 80, both hemispheres 106.4
2840 Female, age 85, both hemispheres 105.6
2456 Female, age 91, both hemispheres 83.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 231.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 195.5
FF:10182-103D2 60 years, female 257.3
FF:10165-103B3 76 years, female 133.6
Medulla oblongata
Scaled Tags Per Million: 123.0
FF:10038-101F2 18-64 years, mixed 139.8
FF:10174-103C3 60 years, female 130.0
FF:10155-103A2 76 years, female 99.3
Pons
Scaled Tags Per Million: 231.6
FF:10033-101E6 18-54 years, mixed 231.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 71.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 55.7
Samples: 4

Max nTPM: 61.8
Min nTPM: 43.8
Sample A Female 61.8
Sample B Female 56.7
Sample C Male 60.4
Sample D Male 43.8
Pons
nTPM: 71.5
Samples: 4

Max nTPM: 89.6
Min nTPM: 57.4
Sample A Female 89.6
Sample B Female 57.4
Sample C Male 68.3
Sample D Male 70.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 98.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 98.1
Samples: 4

Max nTPM: 100.6
Min nTPM: 96.5
Sample A Male 98.5
Sample B Male 100.6
Sample C Female 96.5
Sample D Female 96.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 8.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.1
69837160 Antisense, RP_050217_01_A11, Mouse strain C57BL/6J (56 days, male) 8.1
Pons
Expression energy: 6.9
69837160 Antisense, RP_050217_01_A11, Mouse strain C57BL/6J (56 days, male) 6.9

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