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CELF3
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:63.0 nTPM
FANTOM5:101.7 Scaled Tags Per Million
Pig:89.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006292
Glial cells Low
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 63.0
Samples: 246

Max nTPM: 139.6
Min nTPM: 7.0
Std nTPM: 26.8
Median nTPM: 66.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 139.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 130.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 122.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 115.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 112.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 110.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 109.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 108.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 107.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 107.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 106.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 104.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 103.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 103.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 102.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 100.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 100.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 100.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 99.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 99.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 98.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 97.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 96.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 96.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 96.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 95.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 95.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 94.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 94.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 94.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 94.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 93.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 92.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 92.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 92.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 91.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 91.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 90.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 89.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 89.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 89.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 89.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 88.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 88.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 87.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 86.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 86.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 86.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 86.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 86.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 85.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 85.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 84.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 84.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 84.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 84.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 84.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 83.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 83.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 82.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 81.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 81.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 81.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 81.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 80.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 79.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 79.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 79.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 79.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 79.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 79.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 79.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 79.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 79.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 79.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 79.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 78.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 78.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 77.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 77.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 77.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 77.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 77.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 76.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 75.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 75.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 75.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 75.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 75.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 75.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 74.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 73.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 73.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 73.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 73.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 72.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 71.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 71.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 70.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 70.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 70.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 70.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 70.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 70.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 70.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 69.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 69.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 69.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 69.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 69.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 69.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 68.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 68.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 68.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 68.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 68.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 67.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 67.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 67.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 67.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 66.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 66.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 66.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 66.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 66.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 65.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 65.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 64.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 64.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 63.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 63.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 63.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 63.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 61.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 61.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 61.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 61.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 61.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 60.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 60.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 60.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 60.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 60.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 60.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 59.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 58.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 58.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 57.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 57.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 57.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 57.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 57.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 57.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 57.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 56.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 55.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 54.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 54.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 54.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 54.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 53.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 53.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 53.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 53.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 52.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 51.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 51.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 51.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 51.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 50.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 49.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 48.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 48.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 47.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 47.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 47.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 46.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 46.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 44.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 44.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 43.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 43.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 43.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 41.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 41.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 40.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 39.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 38.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 38.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 37.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 37.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 37.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 36.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 36.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 36.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 36.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 35.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 35.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 35.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 35.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 34.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 34.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 34.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 33.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 33.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 33.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 31.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 30.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 29.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 27.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 27.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 25.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 24.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 24.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 24.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 23.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 23.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 23.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 22.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 22.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 21.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 21.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 20.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 20.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 20.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 20.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 19.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 17.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 16.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 16.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 16.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 15.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 14.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 12.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 12.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 12.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 9.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 7.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 7.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 7.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

101.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 101.7
FF:10164-103B2 76 years, female 101.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.1
Pig sample Sample description nTPM
Caudate
nTPM: 89.1
Samples: 4

Max nTPM: 101.9
Min nTPM: 70.2
Sample A Female 70.2
Sample B Female 99.2
Sample C Male 101.9
Sample D Male 85.2

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