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ALDH4A1
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  • ALDH4A1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:67.3 nTPM
FANTOM5:55.3 Scaled Tags Per Million
Pig:16.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006401Antibody HPA072759Antibody CAB004645
Glial cells LowMediumHigh
Neuronal cells MediumHighMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 67.3
Samples: 246

Max nTPM: 199.9
Min nTPM: 12.5
Std nTPM: 32.3
Median nTPM: 61.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 199.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 181.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 171.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 163.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 156.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 153.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 152.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 146.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 143.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 135.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 132.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 127.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 126.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 125.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 124.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 122.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 120.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 120.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 119.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 113.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 112.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 111.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 111.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 110.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 110.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 108.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 107.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 106.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 106.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 101.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 101.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 101.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 100.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 100.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 99.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 99.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 98.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 97.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 96.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 96.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 95.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 94.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 94.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 92.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 90.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 90.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 90.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 89.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 88.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 88.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 88.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 88.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 87.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 87.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 87.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 86.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 86.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 86.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 86.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 85.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 85.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 84.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 84.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 83.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 83.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 83.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 83.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 82.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 82.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 81.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 81.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 81.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 80.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 79.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 79.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 79.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 78.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 78.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 78.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 77.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 76.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 76.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 76.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 75.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 75.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 74.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 74.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 74.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 74.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 73.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 72.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 72.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 71.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 71.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 70.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 70.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 70.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 70.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 70.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 70.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 69.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 69.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 68.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 67.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 67.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 66.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 66.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 66.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 65.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 65.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 65.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 65.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 65.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 64.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 64.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 64.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 64.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 64.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 63.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 62.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 61.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 61.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 61.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 60.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 60.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 60.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 60.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 59.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 58.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 58.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 58.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 58.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 57.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 57.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 56.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 56.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 56.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 56.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 56.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 56.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 55.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 55.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 55.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 54.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 54.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 54.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 53.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 53.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 53.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 52.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 52.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 51.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 51.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 51.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 51.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 50.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 50.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 50.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 49.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 49.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 48.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 48.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 48.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 47.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 47.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 47.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 47.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 46.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 45.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 45.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 45.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 44.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 44.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 44.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 43.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 43.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 43.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 43.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 43.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 43.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 42.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 42.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 42.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 42.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 42.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 41.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 41.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 41.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 41.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 41.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 41.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 40.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 40.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 39.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 39.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 39.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 38.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 38.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 38.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 38.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 37.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 37.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 37.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 36.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 36.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 36.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 35.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 35.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 35.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 34.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 34.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 34.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 34.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 34.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 32.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 32.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 31.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 31.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 30.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 30.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 29.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 28.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 28.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 28.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 27.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 26.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 24.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 23.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 23.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 23.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 22.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 20.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 16.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 15.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 15.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 13.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 13.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 12.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 12.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

55.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 55.3
FF:10164-103B2 76 years, female 55.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.6
Pig sample Sample description nTPM
Caudate
nTPM: 16.6
Samples: 4

Max nTPM: 19.7
Min nTPM: 13.5
Sample A Female 13.5
Sample B Female 19.7
Sample C Male 17.6
Sample D Male 15.4

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