PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:30.2 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Pig:23.0 nTPM
Mouse:9.5 nTPM
Allen mouse:2.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 30.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 30.2
1984 Male, age 76, both hemispheres 33.9
2188 Female, age 91, both hemispheres 31.5
2090 Male, age 80, both hemispheres 28.7
2301 Female, age 85, both hemispheres 26.8
Area postrema
nTPM: 26.8
2054 Male, age 76, both hemispheres 30.5
2799 Male, age 61, both hemispheres 25.5
2306 Male, age 80, both hemispheres 24.4
Dorsal cochlear nucleus
nTPM: 26.0
2378 Male, age 80, both hemispheres 28.7
2187 Female, age 91, both hemispheres 28.5
2058 Male, age 76, both hemispheres 25.7
2802 Male, age 74, right hemisphere 24.5
2370 Male, age 61, both hemispheres 22.6
Dorsal medullary reticular nucleus
nTPM: 26.5
2088 Male, age 76, both hemispheres 27.4
2040 Female, age 85, both hemispheres 26.5
2373 Male, age 61, both hemispheres 25.5
Dorsal motor vagal complex
nTPM: 26.6
2807 Female, age 85, both hemispheres 31.8
2813 Female, age 72, unknown 28.3
2133 Female, age 91, both hemispheres 27.2
2000 Male, age 74, unknown 26.9
2844 Male, age 55, unknown 26.9
2185 Male, age 76, both hemispheres 26.7
2643 Male, age 74, both hemispheres 24.3
2797 Male, age 61, both hemispheres 20.8
Dorsal tegmental nucleus
nTPM: 26.1
2083 Male, age 80, both hemispheres 27.4
1936 Male, age 76, left hemisphere 26.8
2326 Male, age 74, both hemispheres 26.0
2358 Male, age 61, both hemispheres 24.2
Dorsolateral tegmental area
nTPM: 27.8
2654 Male, age 80, both hemispheres 29.8
2337 Male, age 61, both hemispheres 28.7
2751 Female, age 85, both hemispheres 28.0
2141 Male, age 76, both hemispheres 26.7
2360 Male, age 74, both hemispheres 25.9
Gigantocellular reticular nuclei, medullary
nTPM: 27.3
2387 Female, age 91, both hemispheres 29.8
2022 Male, age 76, right hemisphere 28.6
1876 Female, age 85, both hemispheres 28.1
2314 Male, age 61, both hemispheres 26.3
2310 Male, age 80, both hemispheres 25.5
2462 Male, age 74, both hemispheres 25.4
Gigantocellular reticular nuclei, pars
nTPM: 26.7
2168 Male, age 76, both hemispheres 28.3
2706 Male, age 80, both hemispheres 27.5
2084 Female, age 85, both hemispheres 26.5
2330 Male, age 80, both hemispheres 26.1
2336 Male, age 61, both hemispheres 25.0
Inferior olive
nTPM: 26.6
2379 Male, age 80, both hemispheres 28.7
2628 Female, age 91, both hemispheres 26.7
2563 Male, age 74, both hemispheres 26.2
2085 Female, age 85, both hemispheres 25.8
2178 Male, age 61, both hemispheres 25.4
Kolliker-Fuse nucleus
nTPM: 27.8
2315 Male, age 76, right hemisphere 29.4
2793 Female, age 91, left hemisphere 27.4
2163 Male, age 80, both hemispheres 26.6
Lateral lemniscal nuclei
nTPM: 27.3
2036 Male, age 80, both hemispheres 29.1
2169 Male, age 76, both hemispheres 27.9
2320 Female, age 91, left hemisphere 27.2
2746 Female, age 85, left hemisphere 26.9
2453 Male, age 74, right hemisphere 25.4
Lateral medullary reticular nucleus
nTPM: 27.2
2305 Male, age 74, both hemispheres 29.6
2852 Male, age 80, both hemispheres 28.4
2804 Female, age 91, both hemispheres 27.3
2190 Female, age 85, both hemispheres 26.7
2044 Male, age 76, both hemispheres 26.4
2374 Male, age 61, both hemispheres 25.1
Lateral parabrachial nucleus
nTPM: 27.6
2792 Male, age 76, both hemispheres 29.1
2013 Male, age 80, both hemispheres 28.6
2139 Female, age 85, right hemisphere 27.3
2790 Male, age 61, both hemispheres 25.6
Lateral vestibular nucleus
nTPM: 25.5
2311 Male, age 80, both hemispheres 26.4
2184 Male, age 76, both hemispheres 24.6
Locus coeruleus
nTPM: 29.2
2014 Male, age 55, unknown 32.4
2788 Male, age 74, unknown 31.3
2162 Male, age 80, both hemispheres 29.5
2720 Male, age 74, both hemispheres 29.2
1980 Male, age 76, both hemispheres 28.1
2317 Female, age 72, unknown 27.4
2123 Female, age 91, both hemispheres 26.6
Medial olivary nucleus
nTPM: 27.5
1962 Male, age 76, both hemispheres 28.2
1943 Male, age 61, both hemispheres 27.8
2851 Male, age 80, both hemispheres 27.7
2138 Female, age 91, both hemispheres 26.1
Medial parabrachial nucleus
nTPM: 27.2
2463 Female, age 85, right hemisphere 30.4
2854 Male, age 80, both hemispheres 27.2
2170 Female, age 91, both hemispheres 27.1
2786 Male, age 76, both hemispheres 26.4
2156 Male, age 61, both hemispheres 24.7
Medial periolivary nuclei
nTPM: 27.9
2063 Male, age 76, both hemispheres 28.3
2081 Male, age 80, both hemispheres 28.2
2791 Male, age 74, right hemisphere 27.7
2171 Female, age 85, both hemispheres 27.6
2458 Female, age 91, both hemispheres 27.6
Medial vestibular nucleus
nTPM: 25.1
2803 Female, age 91, both hemispheres 26.6
2093 Male, age 80, both hemispheres 25.9
2743 Female, age 85, both hemispheres 25.5
2134 Male, age 76, both hemispheres 25.2
2801 Male, age 74, both hemispheres 25.1
2624 Male, age 61, both hemispheres 22.1
Motor facial nucleus
nTPM: 27.0
2365 Male, age 74, right hemisphere 28.4
2062 Male, age 76, both hemispheres 28.3
2697 Female, age 85, both hemispheres 28.2
2795 Female, age 91, both hemispheres 27.0
2327 Male, age 80, both hemispheres 25.8
2126 Male, age 61, both hemispheres 24.6
Motor hypoglossal nucleus
nTPM: 27.7
2277 Male, age 76, both hemispheres 31.6
2132 Female, age 85, both hemispheres 28.3
2182 Male, age 80, both hemispheres 27.0
2125 Female, age 91, both hemispheres 26.4
2461 Male, age 61, both hemispheres 25.1
Motor trigeminal nucleus
nTPM: 26.3
2560 Male, age 74, both hemispheres 27.7
2321 Female, age 91, both hemispheres 27.4
2309 Male, age 76, both hemispheres 26.5
2079 Male, age 80, both hemispheres 26.0
2335 Male, age 61, both hemispheres 23.9
Nuclei of the trapezoid body
nTPM: 28.0
2159 Male, age 61, both hemispheres 29.4
2735 Female, age 85, both hemispheres 28.3
2166 Male, age 80, both hemispheres 27.6
2368 Female, age 91, both hemispheres 27.5
1983 Male, age 76, both hemispheres 27.0
Nucleus ambiguus
nTPM: 25.4
2071 Male, age 76, both hemispheres 29.4
2096 Female, age 85, both hemispheres 21.4
Nucleus cuneatus
nTPM: 26.7
2381 Male, age 80, both hemispheres 29.0
2380 Male, age 80, both hemispheres 28.7
2131 Male, age 76, both hemispheres 28.0
2808 Female, age 85, both hemispheres 27.4
2100 Male, age 76, both hemispheres 27.1
2805 Female, age 91, both hemispheres 26.6
2376 Male, age 61, both hemispheres 25.4
2562 Male, age 61, both hemispheres 24.0
2564 Male, age 74, both hemispheres 23.7
Nucleus gracilis
nTPM: 26.4
2382 Male, age 80, both hemispheres 28.6
2627 Male, age 74, both hemispheres 26.2
2299 Female, age 85, both hemispheres 24.5
Nucleus raphe magnus
nTPM: 28.0
2160 Male, age 61, both hemispheres 30.3
2051 Male, age 76, both hemispheres 28.1
2459 Female, age 91, both hemispheres 28.1
2172 Female, age 85, both hemispheres 27.8
2328 Male, age 80, both hemispheres 27.2
2455 Male, age 74, both hemispheres 26.2
Nucleus raphe obscurus
nTPM: 27.5
2142 Male, age 76, midline 28.0
2845 Female, age 85, midline 27.4
2800 Male, age 61, midline 27.0
Nucleus raphe pallidus
nTPM: 28.4
2145 Male, age 76, midline 29.9
1924 Male, age 61, midline 28.7
2183 Male, age 80, midline 26.5
Nucleus tractus solitarii
nTPM: 28.5
2144 Female, age 91, right hemisphere 32.2
2656 Male, age 76, both hemispheres 32.1
2191 Female, age 85, both hemispheres 26.4
2307 Male, age 80, both hemispheres 23.3
Paramedian reticular nucleus
nTPM: 28.1
2052 Male, age 76, both hemispheres 29.8
2050 Female, age 85, both hemispheres 28.8
2057 Male, age 80, both hemispheres 27.3
2313 Male, age 61, both hemispheres 26.5
Parvicellular reticular nuclei
nTPM: 26.9
2095 Male, age 76, both hemispheres 27.3
2119 Male, age 80, both hemispheres 27.1
2558 Male, age 74, both hemispheres 26.4
Parvicellular reticular nuclei, medullary
nTPM: 26.5
2181 Male, age 80, left hemisphere 27.1
2091 Female, age 85, both hemispheres 26.2
2189 Female, age 91, both hemispheres 26.2
Pedunculopontine tegmental nucleus
nTPM: 28.3
1921 Female, age 85, both hemispheres 29.6
2334 Male, age 80, both hemispheres 28.1
2338 Male, age 61, both hemispheres 27.2
Peritrigeminal nucleus
nTPM: 27.1
2067 Female, age 85, both hemispheres 27.6
2136 Male, age 76, both hemispheres 27.3
2179 Male, age 61, both hemispheres 26.5
Pontine nuclei
nTPM: 28.3
2727 Male, age 61, right hemisphere 31.3
1863 Male, age 55, unknown 29.5
2454 Male, age 74, left hemisphere 28.9
2109 Female, age 72, unknown 28.6
2319 Female, age 91, both hemispheres 27.6
1968 Male, age 76, left hemisphere 27.2
2115 Male, age 80, left hemisphere 27.1
2787 Female, age 85, both hemispheres 26.3
Pontine raphe nucleus
nTPM: 27.7
2853 Male, age 76, midline 28.0
2122 Female, age 85, midline 27.4
Posteroventral cochlear nucleus
nTPM: 28.4
2135 Female, age 91, both hemispheres 31.7
2341 Male, age 80, both hemispheres 30.0
2752 Female, age 85, both hemispheres 29.5
2070 Male, age 76, both hemispheres 27.1
2371 Male, age 61, both hemispheres 23.6
Prepositus hypoglossal nucleus
nTPM: 25.4
2855 Female, age 85, right hemisphere 25.7
2086 Male, age 80, both hemispheres 25.1
Principal sensory trigeminal nucleus
nTPM: 27.2
2367 Female, age 91, left hemisphere 28.2
2008 Male, age 80, left hemisphere 27.9
2158 Male, age 61, both hemispheres 27.4
2324 Male, age 76, both hemispheres 25.2
Reticular pontine nucleus, caudal
nTPM: 27.6
2559 Male, age 74, both hemispheres 28.7
2092 Male, age 76, both hemispheres 28.3
2457 Female, age 91, both hemispheres 28.1
2332 Male, age 80, right hemisphere 25.5
Reticular pontine nucleus, oral
nTPM: 27.6
2366 Female, age 91, both hemispheres 28.4
1939 Male, age 80, both hemispheres 27.9
2361 Male, age 74, both hemispheres 27.7
2012 Female, age 85, both hemispheres 27.2
2167 Male, age 76, both hemispheres 26.8
Reticulotegmental nucleus
nTPM: 26.9
2325 Male, age 76, both hemispheres 27.9
2322 Female, age 91, both hemispheres 27.7
2333 Male, age 80, both hemispheres 26.0
2452 Male, age 74, both hemispheres 25.9
Spinal trigeminal nucleus, caudal
nTPM: 26.2
2642 Male, age 74, both hemispheres 27.1
2390 Female, age 91, both hemispheres 26.4
2308 Male, age 80, both hemispheres 26.3
2447 Male, age 76, both hemispheres 25.8
2312 Male, age 61, both hemispheres 25.6
Spinal trigeminal nucleus, interpolar
nTPM: 27.1
2386 Female, age 85, both hemispheres 29.4
2389 Female, age 91, both hemispheres 28.2
2033 Male, age 80, both hemispheres 27.3
2066 Male, age 76, right hemisphere 25.5
2625 Male, age 61, both hemispheres 25.2
Spinal trigeminal nucleus, oral
nTPM: 26.8
2737 Female, age 85, both hemispheres 27.6
1978 Male, age 76, both hemispheres 27.3
2164 Male, age 80, both hemispheres 25.6
Spinal vestibular nucleus
nTPM: 26.2
2186 Female, age 91, both hemispheres 28.1
2780 Male, age 80, both hemispheres 27.6
2806 Female, age 85, both hemispheres 26.8
2384 Male, age 74, both hemispheres 26.1
2748 Male, age 76, both hemispheres 26.0
2796 Male, age 61, both hemispheres 22.5
Subcoeruleus area
nTPM: 27.7
2451 Male, age 74, both hemispheres 28.7
2369 Female, age 85, left hemisphere 28.5
1958 Male, age 80, both hemispheres 27.9
2089 Male, age 76, left hemisphere 27.0
2323 Female, age 91, left hemisphere 26.1
Superior olive
nTPM: 28.0
1875 Female, age 85, both hemispheres 28.9
2020 Male, age 76, both hemispheres 28.5
2561 Female, age 91, both hemispheres 28.5
2364 Male, age 74, right hemisphere 27.9
2329 Male, age 80, right hemisphere 26.5
Superior vestibular nucleus
nTPM: 26.9
2015 Male, age 80, both hemispheres 27.6
2383 Male, age 74, both hemispheres 27.2
2061 Male, age 76, both hemispheres 25.8
Ventral medullary reticular nucleus
nTPM: 26.8
2372 Male, age 61, both hemispheres 27.1
2060 Male, age 76, both hemispheres 26.5
Ventral periolivary nuclei
nTPM: 27.4
2023 Male, age 76, both hemispheres 30.0
2794 Female, age 91, left hemisphere 28.3
2165 Male, age 80, both hemispheres 27.0
2130 Female, age 85, both hemispheres 24.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 26.9
2118 Male, age 80, both hemispheres 29.5
2741 Female, age 85, both hemispheres 27.5
1986 Male, age 76, both hemispheres 26.1
2302 Female, age 91, both hemispheres 26.1
2180 Male, age 61, both hemispheres 25.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 26.5
2161 Male, age 80, both hemispheres 27.7
1959 Male, age 76, both hemispheres 26.9
2449 Male, age 74, both hemispheres 26.9
2456 Female, age 91, both hemispheres 26.5
2359 Male, age 61, both hemispheres 25.7
2840 Female, age 85, both hemispheres 25.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 18.8
FF:10165-103B3 76 years, female 21.6
FF:10182-103D2 60 years, female 16.1
Medulla oblongata
Scaled Tags Per Million: 16.4
FF:10038-101F2 18-64 years, mixed 20.0
FF:10155-103A2 76 years, female 19.8
FF:10174-103C3 60 years, female 9.3
Pons
Scaled Tags Per Million: 18.0
FF:10033-101E6 18-54 years, mixed 18.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 23.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 22.7
Samples: 4

Max nTPM: 24.1
Min nTPM: 21.9
Sample A Female 24.1
Sample B Female 22.7
Sample C Male 22.1
Sample D Male 21.9
Pons
nTPM: 23.0
Samples: 4

Max nTPM: 24.2
Min nTPM: 21.6
Sample A Female 24.2
Sample B Female 22.5
Sample C Male 23.5
Sample D Male 21.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 9.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 9.6
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.3
Sample A Male 10.4
Sample B Male 10.0
Sample C Female 8.3
Sample D Female 9.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.3
68744582 Antisense, RP_050208_01_B10, Mouse strain C57BL/6J (56 days, male) 2.3
Pons
Expression energy: 2.7
68744582 Antisense, RP_050208_01_B10, Mouse strain C57BL/6J (56 days, male) 2.7

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