PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		68.036
Mouse brain, Intensity
Ponsi 		56.050
RNA expressioni
HPA Brain:18.0 nTPM
FANTOM5:85.5 Scaled Tags Per Million
Pig:27.5 nTPM
Mouse:126.6 nTPM
Allen mouse:9.5 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA008001
Medulla oblongata mean intensity 68.036
intensityi
FRONT BACK
Nucleus of the solitary tract 25.808
Raphe magnus nucleus 35.342
Cochlear nucleus 58.968
Lateral paragigantocellular nucleus 63.347
Raphe pallidus nucleus 50.588
Facial nucleus 34.001
Hypoglossal nucleus 12.305
Ambiguus nucleus 26.834
External cuneate nucleus 23.137
Inferior olivary nucleus 31.852
Raphe obscures nucleus 23.995
Dorsal motor nucleus of vagus 20.839
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 56.050
Parabrachial nucleus 50.561
Principle sensory trigeminal nucleus 32.844
Locus coeruleus -
Pontine nucleus 33.243
Vestibular nucleus 13.106
Pontine reticular nucleus, oral 2.198
Lateral lemniscus 32.044
Superior paraolivary nucleus 17.272

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 18.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 13.1
1984 Male, age 76, both hemispheres 14.9
2090 Male, age 80, both hemispheres 14.1
2301 Female, age 85, both hemispheres 11.9
2188 Female, age 91, both hemispheres 11.5
Area postrema
nTPM: 12.9
2799 Male, age 61, both hemispheres 13.8
2054 Male, age 76, both hemispheres 13.7
2306 Male, age 80, both hemispheres 11.1
Dorsal cochlear nucleus
nTPM: 14.9
2058 Male, age 76, both hemispheres 18.0
2370 Male, age 61, both hemispheres 15.1
2378 Male, age 80, both hemispheres 14.9
2802 Male, age 74, right hemisphere 14.1
2187 Female, age 91, both hemispheres 12.4
Dorsal medullary reticular nucleus
nTPM: 14.8
2040 Female, age 85, both hemispheres 15.2
2088 Male, age 76, both hemispheres 14.8
2373 Male, age 61, both hemispheres 14.3
Dorsal motor vagal complex
nTPM: 14.3
2133 Female, age 91, both hemispheres 16.4
2797 Male, age 61, both hemispheres 16.3
2844 Male, age 55, unknown 15.4
2000 Male, age 74, unknown 14.2
2643 Male, age 74, both hemispheres 13.5
2807 Female, age 85, both hemispheres 13.5
2813 Female, age 72, unknown 12.9
2185 Male, age 76, both hemispheres 12.2
Dorsal tegmental nucleus
nTPM: 13.2
2083 Male, age 80, both hemispheres 15.0
1936 Male, age 76, left hemisphere 13.0
2326 Male, age 74, both hemispheres 12.6
2358 Male, age 61, both hemispheres 12.1
Dorsolateral tegmental area
nTPM: 14.1
2141 Male, age 76, both hemispheres 18.2
2654 Male, age 80, both hemispheres 13.8
2751 Female, age 85, both hemispheres 13.4
2337 Male, age 61, both hemispheres 13.0
2360 Male, age 74, both hemispheres 11.9
Gigantocellular reticular nuclei, medullary
nTPM: 14.2
2462 Male, age 74, both hemispheres 15.9
2310 Male, age 80, both hemispheres 15.7
2022 Male, age 76, right hemisphere 15.1
1876 Female, age 85, both hemispheres 13.6
2387 Female, age 91, both hemispheres 12.9
2314 Male, age 61, both hemispheres 12.0
Gigantocellular reticular nuclei, pars
nTPM: 14.1
2084 Female, age 85, both hemispheres 17.6
2168 Male, age 76, both hemispheres 14.2
2330 Male, age 80, both hemispheres 13.5
2336 Male, age 61, both hemispheres 12.8
2706 Male, age 80, both hemispheres 12.6
Inferior olive
nTPM: 10.9
2178 Male, age 61, both hemispheres 11.7
2085 Female, age 85, both hemispheres 11.1
2563 Male, age 74, both hemispheres 11.1
2628 Female, age 91, both hemispheres 10.6
2379 Male, age 80, both hemispheres 10.3
Kolliker-Fuse nucleus
nTPM: 12.6
2163 Male, age 80, both hemispheres 14.7
2315 Male, age 76, right hemisphere 11.7
2793 Female, age 91, left hemisphere 11.4
Lateral lemniscal nuclei
nTPM: 13.7
2453 Male, age 74, right hemisphere 15.3
2746 Female, age 85, left hemisphere 13.8
2036 Male, age 80, both hemispheres 13.4
2169 Male, age 76, both hemispheres 13.3
2320 Female, age 91, left hemisphere 12.8
Lateral medullary reticular nucleus
nTPM: 11.4
2044 Male, age 76, both hemispheres 13.1
2852 Male, age 80, both hemispheres 12.2
2190 Female, age 85, both hemispheres 11.8
2804 Female, age 91, both hemispheres 11.7
2374 Male, age 61, both hemispheres 10.4
2305 Male, age 74, both hemispheres 9.5
Lateral parabrachial nucleus
nTPM: 12.7
2790 Male, age 61, both hemispheres 16.1
2139 Female, age 85, right hemisphere 13.4
2013 Male, age 80, both hemispheres 11.7
2792 Male, age 76, both hemispheres 9.7
Lateral vestibular nucleus
nTPM: 13.5
2184 Male, age 76, both hemispheres 13.8
2311 Male, age 80, both hemispheres 13.2
Locus coeruleus
nTPM: 18.0
2014 Male, age 55, unknown 19.9
2317 Female, age 72, unknown 19.6
2162 Male, age 80, both hemispheres 18.1
2123 Female, age 91, both hemispheres 17.6
1980 Male, age 76, both hemispheres 17.5
2788 Male, age 74, unknown 17.3
2720 Male, age 74, both hemispheres 16.1
Medial olivary nucleus
nTPM: 10.2
2138 Female, age 91, both hemispheres 10.7
2851 Male, age 80, both hemispheres 10.7
1962 Male, age 76, both hemispheres 9.9
1943 Male, age 61, both hemispheres 9.7
Medial parabrachial nucleus
nTPM: 14.1
2156 Male, age 61, both hemispheres 16.5
2463 Female, age 85, right hemisphere 16.0
2786 Male, age 76, both hemispheres 14.2
2170 Female, age 91, both hemispheres 12.5
2854 Male, age 80, both hemispheres 11.3
Medial periolivary nuclei
nTPM: 13.8
2171 Female, age 85, both hemispheres 15.3
2458 Female, age 91, both hemispheres 14.4
2063 Male, age 76, both hemispheres 14.0
2081 Male, age 80, both hemispheres 13.0
2791 Male, age 74, right hemisphere 12.4
Medial vestibular nucleus
nTPM: 14.2
2093 Male, age 80, both hemispheres 16.6
2134 Male, age 76, both hemispheres 15.7
2743 Female, age 85, both hemispheres 15.5
2803 Female, age 91, both hemispheres 13.5
2801 Male, age 74, both hemispheres 12.0
2624 Male, age 61, both hemispheres 11.9
Motor facial nucleus
nTPM: 13.5
2062 Male, age 76, both hemispheres 15.5
2327 Male, age 80, both hemispheres 15.3
2126 Male, age 61, both hemispheres 14.2
2795 Female, age 91, both hemispheres 13.1
2365 Male, age 74, right hemisphere 11.5
2697 Female, age 85, both hemispheres 11.4
Motor hypoglossal nucleus
nTPM: 14.1
2132 Female, age 85, both hemispheres 17.0
2125 Female, age 91, both hemispheres 15.4
2277 Male, age 76, both hemispheres 14.6
2182 Male, age 80, both hemispheres 12.3
2461 Male, age 61, both hemispheres 11.2
Motor trigeminal nucleus
nTPM: 14.4
2309 Male, age 76, both hemispheres 15.4
2079 Male, age 80, both hemispheres 14.5
2335 Male, age 61, both hemispheres 14.5
2321 Female, age 91, both hemispheres 14.1
2560 Male, age 74, both hemispheres 13.8
Nuclei of the trapezoid body
nTPM: 14.5
2735 Female, age 85, both hemispheres 17.3
2368 Female, age 91, both hemispheres 14.3
1983 Male, age 76, both hemispheres 14.0
2166 Male, age 80, both hemispheres 14.0
2159 Male, age 61, both hemispheres 12.8
Nucleus ambiguus
nTPM: 18.0
2096 Female, age 85, both hemispheres 25.5
2071 Male, age 76, both hemispheres 10.5
Nucleus cuneatus
nTPM: 13.3
2562 Male, age 61, both hemispheres 15.3
2131 Male, age 76, both hemispheres 14.6
2100 Male, age 76, both hemispheres 14.4
2376 Male, age 61, both hemispheres 13.8
2805 Female, age 91, both hemispheres 13.3
2564 Male, age 74, both hemispheres 13.1
2381 Male, age 80, both hemispheres 12.7
2380 Male, age 80, both hemispheres 11.5
2808 Female, age 85, both hemispheres 11.1
Nucleus gracilis
nTPM: 10.7
2382 Male, age 80, both hemispheres 11.4
2299 Female, age 85, both hemispheres 11.3
2627 Male, age 74, both hemispheres 9.5
Nucleus raphe magnus
nTPM: 14.2
2172 Female, age 85, both hemispheres 17.6
2455 Male, age 74, both hemispheres 14.5
2459 Female, age 91, both hemispheres 14.3
2328 Male, age 80, both hemispheres 14.0
2160 Male, age 61, both hemispheres 12.8
2051 Male, age 76, both hemispheres 12.0
Nucleus raphe obscurus
nTPM: 11.2
2800 Male, age 61, midline 12.5
2142 Male, age 76, midline 10.8
2845 Female, age 85, midline 10.3
Nucleus raphe pallidus
nTPM: 10.9
2183 Male, age 80, midline 12.8
2145 Male, age 76, midline 10.1
1924 Male, age 61, midline 9.8
Nucleus tractus solitarii
nTPM: 14.5
2307 Male, age 80, both hemispheres 16.3
2656 Male, age 76, both hemispheres 16.0
2191 Female, age 85, both hemispheres 13.0
2144 Female, age 91, right hemisphere 12.6
Paramedian reticular nucleus
nTPM: 14.0
2057 Male, age 80, both hemispheres 16.7
2313 Male, age 61, both hemispheres 14.6
2050 Female, age 85, both hemispheres 13.8
2052 Male, age 76, both hemispheres 10.8
Parvicellular reticular nuclei
nTPM: 14.1
2558 Male, age 74, both hemispheres 15.1
2119 Male, age 80, both hemispheres 14.3
2095 Male, age 76, both hemispheres 12.9
Parvicellular reticular nuclei, medullary
nTPM: 15.3
2181 Male, age 80, left hemisphere 16.5
2091 Female, age 85, both hemispheres 14.9
2189 Female, age 91, both hemispheres 14.5
Pedunculopontine tegmental nucleus
nTPM: 14.5
1921 Female, age 85, both hemispheres 15.6
2334 Male, age 80, both hemispheres 15.2
2338 Male, age 61, both hemispheres 12.6
Peritrigeminal nucleus
nTPM: 12.6
2067 Female, age 85, both hemispheres 12.9
2179 Male, age 61, both hemispheres 12.6
2136 Male, age 76, both hemispheres 12.5
Pontine nuclei
nTPM: 12.6
2787 Female, age 85, both hemispheres 15.6
2115 Male, age 80, left hemisphere 13.3
1968 Male, age 76, left hemisphere 12.9
2727 Male, age 61, right hemisphere 12.5
2454 Male, age 74, left hemisphere 12.4
2109 Female, age 72, unknown 11.6
2319 Female, age 91, both hemispheres 11.4
1863 Male, age 55, unknown 11.3
Pontine raphe nucleus
nTPM: 15.6
2122 Female, age 85, midline 16.6
2853 Male, age 76, midline 14.7
Posteroventral cochlear nucleus
nTPM: 13.2
2752 Female, age 85, both hemispheres 18.2
2371 Male, age 61, both hemispheres 13.7
2070 Male, age 76, both hemispheres 13.2
2135 Female, age 91, both hemispheres 10.7
2341 Male, age 80, both hemispheres 10.4
Prepositus hypoglossal nucleus
nTPM: 15.2
2086 Male, age 80, both hemispheres 17.5
2855 Female, age 85, right hemisphere 12.9
Principal sensory trigeminal nucleus
nTPM: 13.0
2008 Male, age 80, left hemisphere 14.1
2324 Male, age 76, both hemispheres 13.3
2158 Male, age 61, both hemispheres 13.2
2367 Female, age 91, left hemisphere 11.4
Reticular pontine nucleus, caudal
nTPM: 14.3
2332 Male, age 80, right hemisphere 15.5
2457 Female, age 91, both hemispheres 14.4
2559 Male, age 74, both hemispheres 14.3
2092 Male, age 76, both hemispheres 13.1
Reticular pontine nucleus, oral
nTPM: 12.7
2012 Female, age 85, both hemispheres 13.5
2167 Male, age 76, both hemispheres 13.4
1939 Male, age 80, both hemispheres 12.9
2361 Male, age 74, both hemispheres 12.3
2366 Female, age 91, both hemispheres 11.3
Reticulotegmental nucleus
nTPM: 15.1
2452 Male, age 74, both hemispheres 16.1
2333 Male, age 80, both hemispheres 15.6
2325 Male, age 76, both hemispheres 15.1
2322 Female, age 91, both hemispheres 13.8
Spinal trigeminal nucleus, caudal
nTPM: 13.2
2447 Male, age 76, both hemispheres 14.3
2308 Male, age 80, both hemispheres 13.9
2390 Female, age 91, both hemispheres 13.4
2642 Male, age 74, both hemispheres 12.5
2312 Male, age 61, both hemispheres 12.0
Spinal trigeminal nucleus, interpolar
nTPM: 13.8
2066 Male, age 76, right hemisphere 15.8
2033 Male, age 80, both hemispheres 14.6
2386 Female, age 85, both hemispheres 14.2
2389 Female, age 91, both hemispheres 13.5
2625 Male, age 61, both hemispheres 11.1
Spinal trigeminal nucleus, oral
nTPM: 14.8
2737 Female, age 85, both hemispheres 16.5
1978 Male, age 76, both hemispheres 14.5
2164 Male, age 80, both hemispheres 13.5
Spinal vestibular nucleus
nTPM: 15.0
2780 Male, age 80, both hemispheres 16.3
2186 Female, age 91, both hemispheres 15.7
2384 Male, age 74, both hemispheres 15.5
2748 Male, age 76, both hemispheres 14.8
2806 Female, age 85, both hemispheres 13.8
2796 Male, age 61, both hemispheres 13.7
Subcoeruleus area
nTPM: 14.5
2323 Female, age 91, left hemisphere 17.4
2451 Male, age 74, both hemispheres 16.8
2089 Male, age 76, left hemisphere 14.1
1958 Male, age 80, both hemispheres 13.1
2369 Female, age 85, left hemisphere 11.2
Superior olive
nTPM: 13.0
1875 Female, age 85, both hemispheres 13.9
2561 Female, age 91, both hemispheres 13.7
2329 Male, age 80, right hemisphere 13.6
2364 Male, age 74, right hemisphere 12.1
2020 Male, age 76, both hemispheres 11.9
Superior vestibular nucleus
nTPM: 13.3
2061 Male, age 76, both hemispheres 15.1
2015 Male, age 80, both hemispheres 13.8
2383 Male, age 74, both hemispheres 10.9
Ventral medullary reticular nucleus
nTPM: 14.3
2060 Male, age 76, both hemispheres 16.3
2372 Male, age 61, both hemispheres 12.3
Ventral periolivary nuclei
nTPM: 13.8
2130 Female, age 85, both hemispheres 14.9
2794 Female, age 91, left hemisphere 14.6
2165 Male, age 80, both hemispheres 14.2
2023 Male, age 76, both hemispheres 11.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 12.8
2741 Female, age 85, both hemispheres 13.6
1986 Male, age 76, both hemispheres 13.0
2302 Female, age 91, both hemispheres 12.6
2118 Male, age 80, both hemispheres 12.4
2180 Male, age 61, both hemispheres 12.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 12.9
2456 Female, age 91, both hemispheres 14.3
2359 Male, age 61, both hemispheres 14.1
2449 Male, age 74, both hemispheres 14.1
2161 Male, age 80, both hemispheres 12.6
1959 Male, age 76, both hemispheres 11.3
2840 Female, age 85, both hemispheres 10.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 85.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 71.3
FF:10165-103B3 76 years, female 77.3
FF:10182-103D2 60 years, female 65.4
Medulla oblongata
Scaled Tags Per Million: 85.5
FF:10174-103C3 60 years, female 94.1
FF:10155-103A2 76 years, female 94.0
FF:10038-101F2 18-64 years, mixed 68.5
Pons
Scaled Tags Per Million: 64.0
FF:10033-101E6 18-54 years, mixed 64.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 27.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 23.3
Samples: 4

Max nTPM: 25.6
Min nTPM: 19.8
Sample A Female 24.5
Sample B Female 25.6
Sample C Male 23.3
Sample D Male 19.8
Pons
nTPM: 27.5
Samples: 4

Max nTPM: 33.9
Min nTPM: 24.5
Sample A Female 33.9
Sample B Female 24.6
Sample C Male 26.9
Sample D Male 24.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 126.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 126.6
Samples: 4

Max nTPM: 136.7
Min nTPM: 119.9
Sample A Male 122.0
Sample B Male 119.9
Sample C Female 136.7
Sample D Female 127.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 9.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.5
69736262 Antisense, RP_050503_04_D09, Mouse strain C57BL/6J (56 days, male) 9.5
Pons
Expression energy: 8.3
69736262 Antisense, RP_050503_04_D09, Mouse strain C57BL/6J (56 days, male) 8.3

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