PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:30.6 nTPM
FANTOM5:77.1 Scaled Tags Per Million
Pig:62.9 nTPM
Mouse:93.9 nTPM
Allen mouse:2.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 30.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 27.1
2188 Female, age 91, both hemispheres 29.9
2090 Male, age 80, both hemispheres 27.7
2301 Female, age 85, both hemispheres 26.1
1984 Male, age 76, both hemispheres 24.6
Area postrema
nTPM: 24.4
2306 Male, age 80, both hemispheres 27.9
2054 Male, age 76, both hemispheres 24.8
2799 Male, age 61, both hemispheres 20.6
Dorsal cochlear nucleus
nTPM: 26.9
2378 Male, age 80, both hemispheres 28.8
2370 Male, age 61, both hemispheres 28.7
2187 Female, age 91, both hemispheres 26.0
2058 Male, age 76, both hemispheres 25.9
2802 Male, age 74, right hemisphere 25.2
Dorsal medullary reticular nucleus
nTPM: 22.8
2373 Male, age 61, both hemispheres 23.7
2088 Male, age 76, both hemispheres 23.2
2040 Female, age 85, both hemispheres 21.5
Dorsal motor vagal complex
nTPM: 23.3
2807 Female, age 85, both hemispheres 29.8
2643 Male, age 74, both hemispheres 24.8
2000 Male, age 74, unknown 24.0
2185 Male, age 76, both hemispheres 23.4
2133 Female, age 91, both hemispheres 22.5
2844 Male, age 55, unknown 22.5
2813 Female, age 72, unknown 20.2
2797 Male, age 61, both hemispheres 19.3
Dorsal tegmental nucleus
nTPM: 26.7
2083 Male, age 80, both hemispheres 27.7
2326 Male, age 74, both hemispheres 27.5
2358 Male, age 61, both hemispheres 26.9
1936 Male, age 76, left hemisphere 24.5
Dorsolateral tegmental area
nTPM: 28.0
2337 Male, age 61, both hemispheres 33.1
2654 Male, age 80, both hemispheres 28.7
2751 Female, age 85, both hemispheres 28.1
2360 Male, age 74, both hemispheres 25.8
2141 Male, age 76, both hemispheres 24.1
Gigantocellular reticular nuclei, medullary
nTPM: 27.7
2387 Female, age 91, both hemispheres 31.5
2314 Male, age 61, both hemispheres 30.3
2022 Male, age 76, right hemisphere 26.4
2310 Male, age 80, both hemispheres 26.4
2462 Male, age 74, both hemispheres 25.9
1876 Female, age 85, both hemispheres 25.3
Gigantocellular reticular nuclei, pars
nTPM: 26.3
2330 Male, age 80, both hemispheres 29.8
2706 Male, age 80, both hemispheres 29.0
2084 Female, age 85, both hemispheres 24.7
2168 Male, age 76, both hemispheres 23.9
2336 Male, age 61, both hemispheres 23.8
Inferior olive
nTPM: 28.4
2085 Female, age 85, both hemispheres 31.8
2379 Male, age 80, both hemispheres 30.6
2628 Female, age 91, both hemispheres 27.9
2178 Male, age 61, both hemispheres 26.7
2563 Male, age 74, both hemispheres 24.9
Kolliker-Fuse nucleus
nTPM: 29.4
2315 Male, age 76, right hemisphere 32.6
2793 Female, age 91, left hemisphere 29.7
2163 Male, age 80, both hemispheres 25.8
Lateral lemniscal nuclei
nTPM: 25.1
2320 Female, age 91, left hemisphere 27.6
2453 Male, age 74, right hemisphere 26.6
2746 Female, age 85, left hemisphere 26.0
2169 Male, age 76, both hemispheres 23.9
2036 Male, age 80, both hemispheres 21.5
Lateral medullary reticular nucleus
nTPM: 28.8
2190 Female, age 85, both hemispheres 30.8
2804 Female, age 91, both hemispheres 30.1
2305 Male, age 74, both hemispheres 29.5
2852 Male, age 80, both hemispheres 29.0
2374 Male, age 61, both hemispheres 28.0
2044 Male, age 76, both hemispheres 25.8
Lateral parabrachial nucleus
nTPM: 28.0
2792 Male, age 76, both hemispheres 32.0
2013 Male, age 80, both hemispheres 28.0
2139 Female, age 85, right hemisphere 27.7
2790 Male, age 61, both hemispheres 24.5
Lateral vestibular nucleus
nTPM: 26.0
2311 Male, age 80, both hemispheres 26.4
2184 Male, age 76, both hemispheres 25.7
Locus coeruleus
nTPM: 23.7
2788 Male, age 74, unknown 24.8
2317 Female, age 72, unknown 24.5
2720 Male, age 74, both hemispheres 24.0
2014 Male, age 55, unknown 23.7
2123 Female, age 91, both hemispheres 23.4
1980 Male, age 76, both hemispheres 23.1
2162 Male, age 80, both hemispheres 22.5
Medial olivary nucleus
nTPM: 29.0
2851 Male, age 80, both hemispheres 33.0
1962 Male, age 76, both hemispheres 30.5
2138 Female, age 91, both hemispheres 27.7
1943 Male, age 61, both hemispheres 25.0
Medial parabrachial nucleus
nTPM: 26.9
2854 Male, age 80, both hemispheres 28.3
2463 Female, age 85, right hemisphere 28.2
2170 Female, age 91, both hemispheres 27.0
2786 Male, age 76, both hemispheres 25.6
2156 Male, age 61, both hemispheres 25.3
Medial periolivary nuclei
nTPM: 27.3
2081 Male, age 80, both hemispheres 29.7
2458 Female, age 91, both hemispheres 29.2
2791 Male, age 74, right hemisphere 27.5
2063 Male, age 76, both hemispheres 26.6
2171 Female, age 85, both hemispheres 23.7
Medial vestibular nucleus
nTPM: 25.6
2803 Female, age 91, both hemispheres 29.6
2093 Male, age 80, both hemispheres 26.6
2134 Male, age 76, both hemispheres 26.1
2801 Male, age 74, both hemispheres 26.0
2624 Male, age 61, both hemispheres 23.4
2743 Female, age 85, both hemispheres 21.7
Motor facial nucleus
nTPM: 26.7
2697 Female, age 85, both hemispheres 32.3
2327 Male, age 80, both hemispheres 28.1
2795 Female, age 91, both hemispheres 26.0
2062 Male, age 76, both hemispheres 25.0
2365 Male, age 74, right hemisphere 24.5
2126 Male, age 61, both hemispheres 24.3
Motor hypoglossal nucleus
nTPM: 25.2
2132 Female, age 85, both hemispheres 28.2
2182 Male, age 80, both hemispheres 27.5
2277 Male, age 76, both hemispheres 27.1
2125 Female, age 91, both hemispheres 24.3
2461 Male, age 61, both hemispheres 19.0
Motor trigeminal nucleus
nTPM: 26.4
2321 Female, age 91, both hemispheres 29.1
2560 Male, age 74, both hemispheres 28.5
2335 Male, age 61, both hemispheres 25.1
2079 Male, age 80, both hemispheres 24.7
2309 Male, age 76, both hemispheres 24.5
Nuclei of the trapezoid body
nTPM: 26.1
2368 Female, age 91, both hemispheres 28.8
2166 Male, age 80, both hemispheres 28.7
1983 Male, age 76, both hemispheres 26.1
2159 Male, age 61, both hemispheres 24.4
2735 Female, age 85, both hemispheres 22.7
Nucleus ambiguus
nTPM: 29.7
2071 Male, age 76, both hemispheres 30.9
2096 Female, age 85, both hemispheres 28.4
Nucleus cuneatus
nTPM: 26.8
2808 Female, age 85, both hemispheres 32.6
2805 Female, age 91, both hemispheres 30.1
2380 Male, age 80, both hemispheres 29.1
2381 Male, age 80, both hemispheres 29.0
2100 Male, age 76, both hemispheres 24.7
2564 Male, age 74, both hemispheres 24.5
2376 Male, age 61, both hemispheres 23.9
2131 Male, age 76, both hemispheres 23.5
2562 Male, age 61, both hemispheres 23.4
Nucleus gracilis
nTPM: 27.6
2299 Female, age 85, both hemispheres 28.3
2382 Male, age 80, both hemispheres 27.2
2627 Male, age 74, both hemispheres 27.2
Nucleus raphe magnus
nTPM: 25.8
2459 Female, age 91, both hemispheres 27.7
2051 Male, age 76, both hemispheres 26.8
2160 Male, age 61, both hemispheres 26.1
2328 Male, age 80, both hemispheres 26.0
2172 Female, age 85, both hemispheres 24.7
2455 Male, age 74, both hemispheres 23.6
Nucleus raphe obscurus
nTPM: 30.6
2845 Female, age 85, midline 33.4
2142 Male, age 76, midline 30.4
2800 Male, age 61, midline 27.9
Nucleus raphe pallidus
nTPM: 29.1
2145 Male, age 76, midline 30.3
1924 Male, age 61, midline 30.1
2183 Male, age 80, midline 26.9
Nucleus tractus solitarii
nTPM: 27.4
2144 Female, age 91, right hemisphere 32.8
2307 Male, age 80, both hemispheres 26.7
2191 Female, age 85, both hemispheres 26.0
2656 Male, age 76, both hemispheres 24.0
Paramedian reticular nucleus
nTPM: 26.7
2052 Male, age 76, both hemispheres 29.7
2057 Male, age 80, both hemispheres 26.4
2050 Female, age 85, both hemispheres 26.3
2313 Male, age 61, both hemispheres 24.5
Parvicellular reticular nuclei
nTPM: 26.8
2558 Male, age 74, both hemispheres 28.0
2095 Male, age 76, both hemispheres 26.2
2119 Male, age 80, both hemispheres 26.2
Parvicellular reticular nuclei, medullary
nTPM: 24.4
2189 Female, age 91, both hemispheres 26.8
2091 Female, age 85, both hemispheres 24.3
2181 Male, age 80, left hemisphere 22.2
Pedunculopontine tegmental nucleus
nTPM: 28.1
2338 Male, age 61, both hemispheres 34.8
2334 Male, age 80, both hemispheres 26.3
1921 Female, age 85, both hemispheres 23.1
Peritrigeminal nucleus
nTPM: 26.1
2136 Male, age 76, both hemispheres 27.7
2067 Female, age 85, both hemispheres 26.5
2179 Male, age 61, both hemispheres 24.2
Pontine nuclei
nTPM: 27.4
2319 Female, age 91, both hemispheres 30.8
2454 Male, age 74, left hemisphere 30.0
2115 Male, age 80, left hemisphere 29.8
2787 Female, age 85, both hemispheres 27.1
2109 Female, age 72, unknown 26.8
1863 Male, age 55, unknown 26.6
2727 Male, age 61, right hemisphere 25.0
1968 Male, age 76, left hemisphere 23.1
Pontine raphe nucleus
nTPM: 24.4
2122 Female, age 85, midline 24.6
2853 Male, age 76, midline 24.1
Posteroventral cochlear nucleus
nTPM: 26.9
2341 Male, age 80, both hemispheres 31.7
2135 Female, age 91, both hemispheres 30.0
2371 Male, age 61, both hemispheres 26.0
2752 Female, age 85, both hemispheres 24.4
2070 Male, age 76, both hemispheres 22.5
Prepositus hypoglossal nucleus
nTPM: 26.3
2855 Female, age 85, right hemisphere 26.5
2086 Male, age 80, both hemispheres 26.0
Principal sensory trigeminal nucleus
nTPM: 25.1
2367 Female, age 91, left hemisphere 27.8
2008 Male, age 80, left hemisphere 24.8
2324 Male, age 76, both hemispheres 24.0
2158 Male, age 61, both hemispheres 23.8
Reticular pontine nucleus, caudal
nTPM: 27.7
2559 Male, age 74, both hemispheres 29.4
2332 Male, age 80, right hemisphere 27.5
2457 Female, age 91, both hemispheres 27.5
2092 Male, age 76, both hemispheres 26.2
Reticular pontine nucleus, oral
nTPM: 26.4
2366 Female, age 91, both hemispheres 34.1
1939 Male, age 80, both hemispheres 28.1
2167 Male, age 76, both hemispheres 27.0
2012 Female, age 85, both hemispheres 26.1
2361 Male, age 74, both hemispheres 16.8
Reticulotegmental nucleus
nTPM: 28.0
2452 Male, age 74, both hemispheres 30.9
2322 Female, age 91, both hemispheres 28.9
2333 Male, age 80, both hemispheres 27.3
2325 Male, age 76, both hemispheres 25.0
Spinal trigeminal nucleus, caudal
nTPM: 26.3
2642 Male, age 74, both hemispheres 30.7
2390 Female, age 91, both hemispheres 26.2
2312 Male, age 61, both hemispheres 25.4
2308 Male, age 80, both hemispheres 25.3
2447 Male, age 76, both hemispheres 24.1
Spinal trigeminal nucleus, interpolar
nTPM: 24.3
2389 Female, age 91, both hemispheres 25.5
2386 Female, age 85, both hemispheres 24.5
2033 Male, age 80, both hemispheres 24.4
2066 Male, age 76, right hemisphere 24.1
2625 Male, age 61, both hemispheres 22.9
Spinal trigeminal nucleus, oral
nTPM: 25.1
2164 Male, age 80, both hemispheres 28.0
2737 Female, age 85, both hemispheres 24.4
1978 Male, age 76, both hemispheres 22.8
Spinal vestibular nucleus
nTPM: 26.7
2796 Male, age 61, both hemispheres 28.6
2806 Female, age 85, both hemispheres 28.0
2384 Male, age 74, both hemispheres 27.0
2748 Male, age 76, both hemispheres 26.8
2186 Female, age 91, both hemispheres 25.8
2780 Male, age 80, both hemispheres 24.2
Subcoeruleus area
nTPM: 24.9
2369 Female, age 85, left hemisphere 27.3
1958 Male, age 80, both hemispheres 24.8
2451 Male, age 74, both hemispheres 24.6
2323 Female, age 91, left hemisphere 24.1
2089 Male, age 76, left hemisphere 23.7
Superior olive
nTPM: 27.5
2561 Female, age 91, both hemispheres 30.8
2329 Male, age 80, right hemisphere 28.3
1875 Female, age 85, both hemispheres 27.6
2020 Male, age 76, both hemispheres 26.8
2364 Male, age 74, right hemisphere 23.8
Superior vestibular nucleus
nTPM: 27.4
2061 Male, age 76, both hemispheres 27.7
2383 Male, age 74, both hemispheres 27.6
2015 Male, age 80, both hemispheres 26.8
Ventral medullary reticular nucleus
nTPM: 25.4
2060 Male, age 76, both hemispheres 25.6
2372 Male, age 61, both hemispheres 25.2
Ventral periolivary nuclei
nTPM: 26.2
2023 Male, age 76, both hemispheres 27.5
2794 Female, age 91, left hemisphere 27.3
2165 Male, age 80, both hemispheres 26.6
2130 Female, age 85, both hemispheres 23.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 27.7
2118 Male, age 80, both hemispheres 29.6
2302 Female, age 91, both hemispheres 27.4
2741 Female, age 85, both hemispheres 27.4
2180 Male, age 61, both hemispheres 27.2
1986 Male, age 76, both hemispheres 26.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 26.6
2840 Female, age 85, both hemispheres 29.4
2456 Female, age 91, both hemispheres 28.2
2359 Male, age 61, both hemispheres 27.4
2161 Male, age 80, both hemispheres 26.2
2449 Male, age 74, both hemispheres 24.4
1959 Male, age 76, both hemispheres 24.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 77.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 68.8
FF:10182-103D2 60 years, female 74.0
FF:10165-103B3 76 years, female 63.5
Medulla oblongata
Scaled Tags Per Million: 63.2
FF:10174-103C3 60 years, female 78.3
FF:10155-103A2 76 years, female 67.3
FF:10038-101F2 18-64 years, mixed 43.9
Pons
Scaled Tags Per Million: 77.1
FF:10033-101E6 18-54 years, mixed 77.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 62.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 56.3
Samples: 4

Max nTPM: 63.0
Min nTPM: 50.7
Sample A Female 63.0
Sample B Female 50.7
Sample C Male 55.8
Sample D Male 55.5
Pons
nTPM: 62.9
Samples: 4

Max nTPM: 70.3
Min nTPM: 51.7
Sample A Female 70.3
Sample B Female 51.7
Sample C Male 68.4
Sample D Male 61.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 93.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 93.9
Samples: 4

Max nTPM: 98.3
Min nTPM: 92.3
Sample A Male 98.3
Sample B Male 92.6
Sample C Female 92.4
Sample D Female 92.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.5
73573163 Antisense, RP_051121_03_D07, Mouse strain C57BL/6J (56 days, male) 2.5
Pons
Expression energy: 2.3
73573163 Antisense, RP_051121_03_D07, Mouse strain C57BL/6J (56 days, male) 2.3

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