PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:87.8 nTPM
FANTOM5:434.8 Scaled Tags Per Million
Pig:106.8 nTPM
Mouse:174.9 nTPM
Allen mouse:2.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 87.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 47.1
2188 Female, age 91, both hemispheres 53.4
1984 Male, age 76, both hemispheres 50.3
2301 Female, age 85, both hemispheres 43.6
2090 Male, age 80, both hemispheres 41.1
Area postrema
nTPM: 25.4
2054 Male, age 76, both hemispheres 32.7
2799 Male, age 61, both hemispheres 22.7
2306 Male, age 80, both hemispheres 21.0
Dorsal cochlear nucleus
nTPM: 39.2
2802 Male, age 74, right hemisphere 50.5
2187 Female, age 91, both hemispheres 42.3
2378 Male, age 80, both hemispheres 36.1
2058 Male, age 76, both hemispheres 35.9
2370 Male, age 61, both hemispheres 31.0
Dorsal medullary reticular nucleus
nTPM: 37.5
2040 Female, age 85, both hemispheres 54.5
2373 Male, age 61, both hemispheres 29.2
2088 Male, age 76, both hemispheres 28.7
Dorsal motor vagal complex
nTPM: 44.0
2133 Female, age 91, both hemispheres 66.4
2813 Female, age 72, unknown 57.7
2000 Male, age 74, unknown 55.9
2844 Male, age 55, unknown 53.4
2643 Male, age 74, both hemispheres 36.4
2807 Female, age 85, both hemispheres 30.9
2797 Male, age 61, both hemispheres 28.1
2185 Male, age 76, both hemispheres 23.2
Dorsal tegmental nucleus
nTPM: 36.9
2326 Male, age 74, both hemispheres 43.3
2083 Male, age 80, both hemispheres 39.9
1936 Male, age 76, left hemisphere 37.5
2358 Male, age 61, both hemispheres 26.8
Dorsolateral tegmental area
nTPM: 34.5
2751 Female, age 85, both hemispheres 42.2
2654 Male, age 80, both hemispheres 39.4
2360 Male, age 74, both hemispheres 37.9
2141 Male, age 76, both hemispheres 31.1
2337 Male, age 61, both hemispheres 22.0
Gigantocellular reticular nuclei, medullary
nTPM: 45.9
2462 Male, age 74, both hemispheres 67.4
2310 Male, age 80, both hemispheres 47.0
1876 Female, age 85, both hemispheres 46.2
2387 Female, age 91, both hemispheres 45.3
2022 Male, age 76, right hemisphere 40.8
2314 Male, age 61, both hemispheres 28.6
Gigantocellular reticular nuclei, pars
nTPM: 51.2
2168 Male, age 76, both hemispheres 94.6
2330 Male, age 80, both hemispheres 43.5
2706 Male, age 80, both hemispheres 43.5
2084 Female, age 85, both hemispheres 39.0
2336 Male, age 61, both hemispheres 35.4
Inferior olive
nTPM: 33.9
2563 Male, age 74, both hemispheres 44.1
2085 Female, age 85, both hemispheres 36.8
2628 Female, age 91, both hemispheres 35.5
2178 Male, age 61, both hemispheres 26.7
2379 Male, age 80, both hemispheres 26.4
Kolliker-Fuse nucleus
nTPM: 46.9
2315 Male, age 76, right hemisphere 48.3
2793 Female, age 91, left hemisphere 46.7
2163 Male, age 80, both hemispheres 45.6
Lateral lemniscal nuclei
nTPM: 72.0
2169 Male, age 76, both hemispheres 98.6
2036 Male, age 80, both hemispheres 76.3
2746 Female, age 85, left hemisphere 75.2
2453 Male, age 74, right hemisphere 65.2
2320 Female, age 91, left hemisphere 44.8
Lateral medullary reticular nucleus
nTPM: 44.2
2044 Male, age 76, both hemispheres 66.0
2305 Male, age 74, both hemispheres 65.2
2804 Female, age 91, both hemispheres 40.5
2190 Female, age 85, both hemispheres 35.7
2852 Male, age 80, both hemispheres 29.3
2374 Male, age 61, both hemispheres 28.3
Lateral parabrachial nucleus
nTPM: 55.2
2139 Female, age 85, right hemisphere 89.2
2013 Male, age 80, both hemispheres 56.3
2792 Male, age 76, both hemispheres 39.0
2790 Male, age 61, both hemispheres 36.4
Lateral vestibular nucleus
nTPM: 40.1
2184 Male, age 76, both hemispheres 45.0
2311 Male, age 80, both hemispheres 35.1
Locus coeruleus
nTPM: 46.0
2788 Male, age 74, unknown 60.8
2014 Male, age 55, unknown 56.6
2123 Female, age 91, both hemispheres 51.2
2720 Male, age 74, both hemispheres 42.5
2162 Male, age 80, both hemispheres 38.4
1980 Male, age 76, both hemispheres 37.6
2317 Female, age 72, unknown 35.2
Medial olivary nucleus
nTPM: 36.1
1962 Male, age 76, both hemispheres 39.6
2138 Female, age 91, both hemispheres 38.0
2851 Male, age 80, both hemispheres 35.9
1943 Male, age 61, both hemispheres 31.0
Medial parabrachial nucleus
nTPM: 41.2
2854 Male, age 80, both hemispheres 57.8
2170 Female, age 91, both hemispheres 46.0
2463 Female, age 85, right hemisphere 37.1
2156 Male, age 61, both hemispheres 32.6
2786 Male, age 76, both hemispheres 32.3
Medial periolivary nuclei
nTPM: 77.8
2063 Male, age 76, both hemispheres 118.8
2171 Female, age 85, both hemispheres 106.4
2791 Male, age 74, right hemisphere 71.6
2081 Male, age 80, both hemispheres 49.4
2458 Female, age 91, both hemispheres 42.7
Medial vestibular nucleus
nTPM: 55.0
2743 Female, age 85, both hemispheres 66.2
2801 Male, age 74, both hemispheres 63.4
2134 Male, age 76, both hemispheres 62.2
2803 Female, age 91, both hemispheres 56.4
2093 Male, age 80, both hemispheres 45.6
2624 Male, age 61, both hemispheres 36.1
Motor facial nucleus
nTPM: 68.7
2062 Male, age 76, both hemispheres 112.7
2697 Female, age 85, both hemispheres 74.5
2365 Male, age 74, right hemisphere 69.8
2327 Male, age 80, both hemispheres 62.8
2795 Female, age 91, both hemispheres 51.2
2126 Male, age 61, both hemispheres 41.2
Motor hypoglossal nucleus
nTPM: 46.5
2461 Male, age 61, both hemispheres 62.0
2125 Female, age 91, both hemispheres 57.3
2132 Female, age 85, both hemispheres 44.5
2277 Male, age 76, both hemispheres 37.3
2182 Male, age 80, both hemispheres 31.3
Motor trigeminal nucleus
nTPM: 43.2
2079 Male, age 80, both hemispheres 69.0
2560 Male, age 74, both hemispheres 42.8
2309 Male, age 76, both hemispheres 37.3
2321 Female, age 91, both hemispheres 36.9
2335 Male, age 61, both hemispheres 30.2
Nuclei of the trapezoid body
nTPM: 87.8
2159 Male, age 61, both hemispheres 121.2
2735 Female, age 85, both hemispheres 110.6
1983 Male, age 76, both hemispheres 100.4
2166 Male, age 80, both hemispheres 61.7
2368 Female, age 91, both hemispheres 45.3
Nucleus ambiguus
nTPM: 27.3
2071 Male, age 76, both hemispheres 33.1
2096 Female, age 85, both hemispheres 21.5
Nucleus cuneatus
nTPM: 32.1
2131 Male, age 76, both hemispheres 42.1
2376 Male, age 61, both hemispheres 39.1
2564 Male, age 74, both hemispheres 37.3
2381 Male, age 80, both hemispheres 29.0
2808 Female, age 85, both hemispheres 28.8
2100 Male, age 76, both hemispheres 28.6
2562 Male, age 61, both hemispheres 28.4
2805 Female, age 91, both hemispheres 28.3
2380 Male, age 80, both hemispheres 27.5
Nucleus gracilis
nTPM: 30.1
2627 Male, age 74, both hemispheres 42.3
2382 Male, age 80, both hemispheres 24.7
2299 Female, age 85, both hemispheres 23.3
Nucleus raphe magnus
nTPM: 83.6
2160 Male, age 61, both hemispheres 129.1
2172 Female, age 85, both hemispheres 104.5
2455 Male, age 74, both hemispheres 79.1
2051 Male, age 76, both hemispheres 74.2
2328 Male, age 80, both hemispheres 63.9
2459 Female, age 91, both hemispheres 50.6
Nucleus raphe obscurus
nTPM: 36.8
2845 Female, age 85, midline 46.6
2800 Male, age 61, midline 36.0
2142 Male, age 76, midline 27.7
Nucleus raphe pallidus
nTPM: 45.0
1924 Male, age 61, midline 53.0
2183 Male, age 80, midline 46.1
2145 Male, age 76, midline 35.9
Nucleus tractus solitarii
nTPM: 53.1
2144 Female, age 91, right hemisphere 109.3
2656 Male, age 76, both hemispheres 42.3
2191 Female, age 85, both hemispheres 31.1
2307 Male, age 80, both hemispheres 29.6
Paramedian reticular nucleus
nTPM: 58.3
2050 Female, age 85, both hemispheres 88.7
2057 Male, age 80, both hemispheres 52.5
2052 Male, age 76, both hemispheres 47.4
2313 Male, age 61, both hemispheres 44.6
Parvicellular reticular nuclei
nTPM: 50.0
2095 Male, age 76, both hemispheres 56.8
2558 Male, age 74, both hemispheres 51.9
2119 Male, age 80, both hemispheres 41.2
Parvicellular reticular nuclei, medullary
nTPM: 46.3
2189 Female, age 91, both hemispheres 49.7
2091 Female, age 85, both hemispheres 47.5
2181 Male, age 80, left hemisphere 41.7
Pedunculopontine tegmental nucleus
nTPM: 40.9
2338 Male, age 61, both hemispheres 42.9
1921 Female, age 85, both hemispheres 41.6
2334 Male, age 80, both hemispheres 38.0
Peritrigeminal nucleus
nTPM: 54.4
2136 Male, age 76, both hemispheres 60.5
2179 Male, age 61, both hemispheres 56.5
2067 Female, age 85, both hemispheres 46.1
Pontine nuclei
nTPM: 86.6
2727 Male, age 61, right hemisphere 125.3
1863 Male, age 55, unknown 114.8
2109 Female, age 72, unknown 106.0
2787 Female, age 85, both hemispheres 96.6
1968 Male, age 76, left hemisphere 89.9
2454 Male, age 74, left hemisphere 62.3
2319 Female, age 91, both hemispheres 51.3
2115 Male, age 80, left hemisphere 46.8
Pontine raphe nucleus
nTPM: 64.1
2122 Female, age 85, midline 89.8
2853 Male, age 76, midline 38.3
Posteroventral cochlear nucleus
nTPM: 41.4
2752 Female, age 85, both hemispheres 55.8
2070 Male, age 76, both hemispheres 48.9
2341 Male, age 80, both hemispheres 38.1
2135 Female, age 91, both hemispheres 36.2
2371 Male, age 61, both hemispheres 27.7
Prepositus hypoglossal nucleus
nTPM: 51.4
2855 Female, age 85, right hemisphere 59.3
2086 Male, age 80, both hemispheres 43.5
Principal sensory trigeminal nucleus
nTPM: 70.7
2158 Male, age 61, both hemispheres 105.9
2008 Male, age 80, left hemisphere 87.0
2367 Female, age 91, left hemisphere 49.1
2324 Male, age 76, both hemispheres 40.6
Reticular pontine nucleus, caudal
nTPM: 59.0
2092 Male, age 76, both hemispheres 79.5
2332 Male, age 80, right hemisphere 59.8
2457 Female, age 91, both hemispheres 49.9
2559 Male, age 74, both hemispheres 46.7
Reticular pontine nucleus, oral
nTPM: 51.3
2012 Female, age 85, both hemispheres 71.3
2361 Male, age 74, both hemispheres 63.8
2366 Female, age 91, both hemispheres 43.7
1939 Male, age 80, both hemispheres 40.7
2167 Male, age 76, both hemispheres 36.9
Reticulotegmental nucleus
nTPM: 46.4
2325 Male, age 76, both hemispheres 61.6
2333 Male, age 80, both hemispheres 42.1
2452 Male, age 74, both hemispheres 42.1
2322 Female, age 91, both hemispheres 39.8
Spinal trigeminal nucleus, caudal
nTPM: 42.6
2390 Female, age 91, both hemispheres 64.5
2447 Male, age 76, both hemispheres 43.2
2642 Male, age 74, both hemispheres 39.6
2312 Male, age 61, both hemispheres 35.5
2308 Male, age 80, both hemispheres 30.4
Spinal trigeminal nucleus, interpolar
nTPM: 63.9
2066 Male, age 76, right hemisphere 94.2
2625 Male, age 61, both hemispheres 70.0
2389 Female, age 91, both hemispheres 62.7
2033 Male, age 80, both hemispheres 47.8
2386 Female, age 85, both hemispheres 44.8
Spinal trigeminal nucleus, oral
nTPM: 43.7
2164 Male, age 80, both hemispheres 45.8
2737 Female, age 85, both hemispheres 45.8
1978 Male, age 76, both hemispheres 39.6
Spinal vestibular nucleus
nTPM: 43.2
2806 Female, age 85, both hemispheres 50.8
2186 Female, age 91, both hemispheres 47.9
2384 Male, age 74, both hemispheres 43.1
2780 Male, age 80, both hemispheres 42.9
2796 Male, age 61, both hemispheres 37.5
2748 Male, age 76, both hemispheres 37.1
Subcoeruleus area
nTPM: 51.7
1958 Male, age 80, both hemispheres 65.0
2089 Male, age 76, left hemisphere 64.6
2451 Male, age 74, both hemispheres 43.3
2323 Female, age 91, left hemisphere 43.1
2369 Female, age 85, left hemisphere 42.2
Superior olive
nTPM: 72.3
1875 Female, age 85, both hemispheres 109.1
2020 Male, age 76, both hemispheres 80.1
2364 Male, age 74, right hemisphere 68.5
2329 Male, age 80, right hemisphere 56.9
2561 Female, age 91, both hemispheres 46.7
Superior vestibular nucleus
nTPM: 45.1
2383 Male, age 74, both hemispheres 51.6
2015 Male, age 80, both hemispheres 46.6
2061 Male, age 76, both hemispheres 37.0
Ventral medullary reticular nucleus
nTPM: 32.1
2372 Male, age 61, both hemispheres 32.3
2060 Male, age 76, both hemispheres 31.8
Ventral periolivary nuclei
nTPM: 79.1
2130 Female, age 85, both hemispheres 93.9
2023 Male, age 76, both hemispheres 85.3
2165 Male, age 80, both hemispheres 81.4
2794 Female, age 91, left hemisphere 55.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 48.0
1986 Male, age 76, both hemispheres 60.5
2741 Female, age 85, both hemispheres 57.6
2302 Female, age 91, both hemispheres 45.0
2180 Male, age 61, both hemispheres 40.3
2118 Male, age 80, both hemispheres 36.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 55.3
1959 Male, age 76, both hemispheres 77.8
2449 Male, age 74, both hemispheres 67.5
2840 Female, age 85, both hemispheres 60.7
2161 Male, age 80, both hemispheres 58.2
2456 Female, age 91, both hemispheres 37.8
2359 Male, age 61, both hemispheres 29.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 434.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 156.1
FF:10182-103D2 60 years, female 181.9
FF:10165-103B3 76 years, female 130.2
Medulla oblongata
Scaled Tags Per Million: 114.0
FF:10155-103A2 76 years, female 148.7
FF:10038-101F2 18-64 years, mixed 97.0
FF:10174-103C3 60 years, female 96.2
Pons
Scaled Tags Per Million: 434.8
FF:10033-101E6 18-54 years, mixed 434.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 106.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 62.2
Samples: 4

Max nTPM: 72.9
Min nTPM: 49.7
Sample A Female 72.9
Sample B Female 71.7
Sample C Male 54.4
Sample D Male 49.7
Pons
nTPM: 106.8
Samples: 4

Max nTPM: 158.1
Min nTPM: 55.1
Sample A Female 158.1
Sample B Female 55.1
Sample C Male 81.0
Sample D Male 133.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 174.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 174.9
Samples: 4

Max nTPM: 179.6
Min nTPM: 166.5
Sample A Male 179.6
Sample B Male 177.0
Sample C Female 166.5
Sample D Female 176.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.4
72129295 Antisense, RP_051017_03_F11, Mouse strain C57BL/6J (56 days, male) 3.0
69134487 Antisense, RP_050321_03_A05, Mouse strain C57BL/6J (56 days, male) 1.8
Pons
Expression energy: 2.2
72129295 Antisense, RP_051017_03_F11, Mouse strain C57BL/6J (56 days, male) 2.2
69134487 Antisense, RP_050321_03_A05, Mouse strain C57BL/6J (56 days, male) 2.1

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