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NDUFB8
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  • NDUFB8
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:356.3 nTPM
FANTOM5:208.2 Scaled Tags Per Million
Pig:52.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003886
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

356.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 356.3
Samples: 246

Max nTPM: 952.6
Min nTPM: 144.0
Std nTPM: 102.0
Median nTPM: 341.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 952.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 861.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 805.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 775.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 644.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 607.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 602.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 582.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 533.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 523.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 520.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 507.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 505.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 503.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 489.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 485.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 484.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 475.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 471.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 464.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 463.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 458.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 457.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 457.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 457.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 448.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 447.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 442.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 441.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 438.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 437.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 437.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 435.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 435.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 435.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 432.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 431.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 431.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 430.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 428.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 427.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 426.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 425.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 423.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 421.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 421.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 419.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 417.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 417.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 416.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 414.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 414.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 413.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 411.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 410.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 409.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 405.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 405.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 404.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 401.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 401.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 399.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 399.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 399.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 399.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 397.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 397.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 393.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 393.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 392.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 392.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 390.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 390.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 388.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 385.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 385.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 385.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 385.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 384.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 384.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 383.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 382.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 382.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 382.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 379.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 378.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 377.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 375.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 374.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 374.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 374.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 374.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 371.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 371.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 369.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 368.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 366.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 366.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 364.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 364.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 363.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 362.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 359.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 359.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 358.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 358.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 358.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 354.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 354.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 353.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 353.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 352.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 350.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 349.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 349.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 349.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 349.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 348.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 347.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 347.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 346.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 343.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 341.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 341.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 339.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 339.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 338.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 338.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 338.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 337.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 336.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 335.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 335.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 335.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 334.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 333.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 333.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 331.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 331.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 331.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 330.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 329.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 329.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 329.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 328.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 328.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 327.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 327.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 327.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 322.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 322.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 322.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 320.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 320.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 320.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 319.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 319.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 319.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 319.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 315.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 314.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 314.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 314.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 314.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 313.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 312.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 311.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 311.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 310.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 309.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 309.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 309.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 307.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 306.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 306.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 304.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 304.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 301.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 301.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 299.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 297.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 297.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 296.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 295.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 292.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 290.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 290.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 289.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 288.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 288.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 287.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 287.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 285.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 285.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 284.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 284.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 283.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 282.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 281.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 281.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 280.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 280.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 279.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 277.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 275.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 273.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 271.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 269.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 269.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 269.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 268.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 268.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 266.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 266.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 265.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 264.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 261.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 257.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 256.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 253.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 251.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 250.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 248.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 247.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 247.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 245.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 244.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 244.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 242.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 239.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 234.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 231.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 229.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 228.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 219.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 212.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 210.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 209.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 209.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 202.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 200.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 197.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 193.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 184.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 175.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 144.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

208.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 208.2
FF:10164-103B2 76 years, female 208.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.0
Pig sample Sample description nTPM
Caudate
nTPM: 52.1
Samples: 4

Max nTPM: 57.6
Min nTPM: 46.8
Sample A Female 46.8
Sample B Female 54.9
Sample C Male 57.6
Sample D Male 48.9

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