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CRABP1
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  • CRABP1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:84.8 nTPM
FANTOM5:49.1 Scaled Tags Per Million
Pig:84.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA017203
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 84.8
Samples: 246

Max nTPM: 314.2
Min nTPM: 7.3
Std nTPM: 46.5
Median nTPM: 79.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 314.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 256.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 246.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 229.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 210.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 207.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 206.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 194.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 192.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 176.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 175.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 170.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 170.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 168.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 162.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 161.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 157.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 154.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 153.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 147.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 146.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 144.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 143.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 141.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 137.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 135.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 135.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 133.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 133.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 131.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 131.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 131.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 130.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 130.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 129.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 127.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 127.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 126.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 126.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 126.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 125.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 124.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 123.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 123.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 123.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 121.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 118.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 117.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 117.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 114.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 114.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 114.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 113.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 112.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 111.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 111.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 111.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 108.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 107.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 107.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 107.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 106.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 105.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 105.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 105.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 103.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 102.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 101.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 101.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 101.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 100.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 100.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 100.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 100.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 99.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 99.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 98.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 98.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 97.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 97.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 96.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 95.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 95.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 95.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 95.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 94.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 94.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 93.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 93.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 93.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 92.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 91.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 91.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 90.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 89.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 89.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 89.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 88.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 88.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 88.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 88.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 88.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 87.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 87.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 87.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 85.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 84.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 84.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 83.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 82.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 82.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 82.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 81.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 81.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 81.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 80.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 80.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 80.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 79.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 79.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 79.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 78.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 77.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 77.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 77.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 77.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 76.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 76.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 76.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 76.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 76.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 76.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 75.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 75.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 75.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 74.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 74.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 72.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 72.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 72.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 70.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 70.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 70.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 70.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 69.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 68.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 68.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 68.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 67.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 67.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 67.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 65.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 65.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 65.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 63.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 63.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 62.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 62.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 62.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 62.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 61.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 61.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 61.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 61.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 60.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 60.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 60.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 60.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 59.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 59.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 59.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 59.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 59.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 57.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 57.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 56.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 56.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 55.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 55.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 55.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 54.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 54.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 53.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 53.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 52.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 52.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 51.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 51.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 50.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 50.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 49.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 49.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 48.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 48.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 47.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 46.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 46.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 45.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 44.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 44.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 43.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 43.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 42.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 40.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 40.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 39.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 39.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 39.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 39.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 38.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 38.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 37.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 36.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 35.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 34.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 34.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 28.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 27.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 27.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 26.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 25.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 23.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 23.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 22.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 21.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 20.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 20.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 19.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 18.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 17.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 17.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 14.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 14.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 14.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 13.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 13.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 13.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 12.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 8.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 7.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

49.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 49.1
FF:10164-103B2 76 years, female 49.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.6
Pig sample Sample description nTPM
Caudate
nTPM: 84.6
Samples: 4

Max nTPM: 101.4
Min nTPM: 73.9
Sample A Female 89.2
Sample B Female 101.4
Sample C Male 73.9
Sample D Male 74.0

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