PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:859.8 nTPM
FANTOM5:89.3 Scaled Tags Per Million
Pig:3.7 nTPM
Mouse:208.0 nTPM
Allen mouse:10.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 859.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 624.5
2090 Male, age 80, both hemispheres 732.6
2188 Female, age 91, both hemispheres 642.6
2301 Female, age 85, both hemispheres 564.0
1984 Male, age 76, both hemispheres 558.6
Area postrema
nTPM: 784.1
2799 Male, age 61, both hemispheres 956.3
2306 Male, age 80, both hemispheres 828.4
2054 Male, age 76, both hemispheres 567.7
Dorsal cochlear nucleus
nTPM: 689.1
2802 Male, age 74, right hemisphere 833.3
2058 Male, age 76, both hemispheres 690.0
2187 Female, age 91, both hemispheres 688.3
2378 Male, age 80, both hemispheres 629.5
2370 Male, age 61, both hemispheres 604.4
Dorsal medullary reticular nucleus
nTPM: 587.2
2088 Male, age 76, both hemispheres 612.6
2373 Male, age 61, both hemispheres 612.0
2040 Female, age 85, both hemispheres 537.1
Dorsal motor vagal complex
nTPM: 693.4
2797 Male, age 61, both hemispheres 1017.9
2643 Male, age 74, both hemispheres 823.5
2844 Male, age 55, unknown 707.3
2807 Female, age 85, both hemispheres 674.0
2000 Male, age 74, unknown 635.8
2133 Female, age 91, both hemispheres 627.9
2185 Male, age 76, both hemispheres 583.4
2813 Female, age 72, unknown 477.6
Dorsal tegmental nucleus
nTPM: 596.6
2326 Male, age 74, both hemispheres 661.5
2083 Male, age 80, both hemispheres 623.9
1936 Male, age 76, left hemisphere 556.2
2358 Male, age 61, both hemispheres 544.9
Dorsolateral tegmental area
nTPM: 624.2
2337 Male, age 61, both hemispheres 754.5
2654 Male, age 80, both hemispheres 710.1
2360 Male, age 74, both hemispheres 582.4
2141 Male, age 76, both hemispheres 540.5
2751 Female, age 85, both hemispheres 533.5
Gigantocellular reticular nuclei, medullary
nTPM: 566.5
2314 Male, age 61, both hemispheres 728.6
2310 Male, age 80, both hemispheres 585.0
2462 Male, age 74, both hemispheres 549.9
2022 Male, age 76, right hemisphere 537.9
2387 Female, age 91, both hemispheres 533.0
1876 Female, age 85, both hemispheres 464.2
Gigantocellular reticular nuclei, pars
nTPM: 514.2
2084 Female, age 85, both hemispheres 567.5
2330 Male, age 80, both hemispheres 520.9
2706 Male, age 80, both hemispheres 501.9
2168 Male, age 76, both hemispheres 495.2
2336 Male, age 61, both hemispheres 485.6
Inferior olive
nTPM: 725.9
2379 Male, age 80, both hemispheres 803.3
2563 Male, age 74, both hemispheres 761.3
2085 Female, age 85, both hemispheres 709.2
2178 Male, age 61, both hemispheres 697.1
2628 Female, age 91, both hemispheres 658.4
Kolliker-Fuse nucleus
nTPM: 600.8
2315 Male, age 76, right hemisphere 737.7
2163 Male, age 80, both hemispheres 542.0
2793 Female, age 91, left hemisphere 522.8
Lateral lemniscal nuclei
nTPM: 484.3
2746 Female, age 85, left hemisphere 587.3
2320 Female, age 91, left hemisphere 504.2
2169 Male, age 76, both hemispheres 481.5
2453 Male, age 74, right hemisphere 457.4
2036 Male, age 80, both hemispheres 390.9
Lateral medullary reticular nucleus
nTPM: 654.4
2852 Male, age 80, both hemispheres 851.7
2804 Female, age 91, both hemispheres 665.3
2190 Female, age 85, both hemispheres 644.6
2305 Male, age 74, both hemispheres 634.5
2044 Male, age 76, both hemispheres 581.3
2374 Male, age 61, both hemispheres 549.1
Lateral parabrachial nucleus
nTPM: 643.2
2792 Male, age 76, both hemispheres 700.9
2013 Male, age 80, both hemispheres 683.7
2790 Male, age 61, both hemispheres 601.3
2139 Female, age 85, right hemisphere 586.8
Lateral vestibular nucleus
nTPM: 633.1
2311 Male, age 80, both hemispheres 747.6
2184 Male, age 76, both hemispheres 518.6
Locus coeruleus
nTPM: 530.9
2162 Male, age 80, both hemispheres 591.7
2123 Female, age 91, both hemispheres 581.8
2317 Female, age 72, unknown 544.2
2014 Male, age 55, unknown 530.1
2720 Male, age 74, both hemispheres 519.6
1980 Male, age 76, both hemispheres 505.5
2788 Male, age 74, unknown 443.3
Medial olivary nucleus
nTPM: 736.8
1943 Male, age 61, both hemispheres 823.8
1962 Male, age 76, both hemispheres 798.8
2138 Female, age 91, both hemispheres 732.5
2851 Male, age 80, both hemispheres 592.2
Medial parabrachial nucleus
nTPM: 589.4
2170 Female, age 91, both hemispheres 676.2
2463 Female, age 85, right hemisphere 667.4
2156 Male, age 61, both hemispheres 608.9
2786 Male, age 76, both hemispheres 520.4
2854 Male, age 80, both hemispheres 473.9
Medial periolivary nuclei
nTPM: 564.9
2081 Male, age 80, both hemispheres 671.1
2063 Male, age 76, both hemispheres 648.8
2458 Female, age 91, both hemispheres 541.4
2791 Male, age 74, right hemisphere 482.9
2171 Female, age 85, both hemispheres 480.2
Medial vestibular nucleus
nTPM: 532.1
2093 Male, age 80, both hemispheres 580.5
2743 Female, age 85, both hemispheres 561.4
2803 Female, age 91, both hemispheres 526.1
2801 Male, age 74, both hemispheres 511.0
2134 Male, age 76, both hemispheres 509.0
2624 Male, age 61, both hemispheres 504.6
Motor facial nucleus
nTPM: 542.7
2126 Male, age 61, both hemispheres 696.2
2062 Male, age 76, both hemispheres 652.4
2795 Female, age 91, both hemispheres 540.5
2365 Male, age 74, right hemisphere 497.4
2697 Female, age 85, both hemispheres 456.2
2327 Male, age 80, both hemispheres 413.4
Motor hypoglossal nucleus
nTPM: 609.9
2182 Male, age 80, both hemispheres 811.6
2125 Female, age 91, both hemispheres 645.7
2132 Female, age 85, both hemispheres 641.0
2277 Male, age 76, both hemispheres 578.4
2461 Male, age 61, both hemispheres 372.9
Motor trigeminal nucleus
nTPM: 583.4
2335 Male, age 61, both hemispheres 637.8
2560 Male, age 74, both hemispheres 596.4
2321 Female, age 91, both hemispheres 578.0
2309 Male, age 76, both hemispheres 564.3
2079 Male, age 80, both hemispheres 540.7
Nuclei of the trapezoid body
nTPM: 561.3
1983 Male, age 76, both hemispheres 709.6
2735 Female, age 85, both hemispheres 555.9
2368 Female, age 91, both hemispheres 530.5
2166 Male, age 80, both hemispheres 524.2
2159 Male, age 61, both hemispheres 486.5
Nucleus ambiguus
nTPM: 859.8
2096 Female, age 85, both hemispheres 887.3
2071 Male, age 76, both hemispheres 832.2
Nucleus cuneatus
nTPM: 647.1
2564 Male, age 74, both hemispheres 734.9
2805 Female, age 91, both hemispheres 723.0
2380 Male, age 80, both hemispheres 719.2
2562 Male, age 61, both hemispheres 666.0
2808 Female, age 85, both hemispheres 657.2
2381 Male, age 80, both hemispheres 616.5
2376 Male, age 61, both hemispheres 603.8
2100 Male, age 76, both hemispheres 587.0
2131 Male, age 76, both hemispheres 516.4
Nucleus gracilis
nTPM: 735.6
2299 Female, age 85, both hemispheres 837.5
2382 Male, age 80, both hemispheres 732.2
2627 Male, age 74, both hemispheres 637.1
Nucleus raphe magnus
nTPM: 499.9
2051 Male, age 76, both hemispheres 590.4
2459 Female, age 91, both hemispheres 544.3
2455 Male, age 74, both hemispheres 490.2
2172 Female, age 85, both hemispheres 477.2
2328 Male, age 80, both hemispheres 453.7
2160 Male, age 61, both hemispheres 443.6
Nucleus raphe obscurus
nTPM: 689.0
2142 Male, age 76, midline 803.8
2800 Male, age 61, midline 660.9
2845 Female, age 85, midline 602.2
Nucleus raphe pallidus
nTPM: 723.9
2145 Male, age 76, midline 798.1
1924 Male, age 61, midline 774.5
2183 Male, age 80, midline 599.3
Nucleus tractus solitarii
nTPM: 586.4
2191 Female, age 85, both hemispheres 634.4
2307 Male, age 80, both hemispheres 610.3
2656 Male, age 76, both hemispheres 579.0
2144 Female, age 91, right hemisphere 521.8
Paramedian reticular nucleus
nTPM: 559.8
2057 Male, age 80, both hemispheres 640.8
2052 Male, age 76, both hemispheres 570.2
2313 Male, age 61, both hemispheres 533.3
2050 Female, age 85, both hemispheres 494.8
Parvicellular reticular nuclei
nTPM: 574.1
2119 Male, age 80, both hemispheres 609.3
2095 Male, age 76, both hemispheres 575.8
2558 Male, age 74, both hemispheres 537.3
Parvicellular reticular nuclei, medullary
nTPM: 569.3
2181 Male, age 80, left hemisphere 605.3
2091 Female, age 85, both hemispheres 564.3
2189 Female, age 91, both hemispheres 538.4
Pedunculopontine tegmental nucleus
nTPM: 532.2
2338 Male, age 61, both hemispheres 600.9
2334 Male, age 80, both hemispheres 544.7
1921 Female, age 85, both hemispheres 451.2
Peritrigeminal nucleus
nTPM: 686.6
2067 Female, age 85, both hemispheres 813.1
2136 Male, age 76, both hemispheres 670.4
2179 Male, age 61, both hemispheres 576.2
Pontine nuclei
nTPM: 548.6
1968 Male, age 76, left hemisphere 634.9
2115 Male, age 80, left hemisphere 629.9
2319 Female, age 91, both hemispheres 582.6
2787 Female, age 85, both hemispheres 544.7
2109 Female, age 72, unknown 533.7
1863 Male, age 55, unknown 521.3
2727 Male, age 61, right hemisphere 476.9
2454 Male, age 74, left hemisphere 464.9
Pontine raphe nucleus
nTPM: 546.5
2853 Male, age 76, midline 568.5
2122 Female, age 85, midline 524.5
Posteroventral cochlear nucleus
nTPM: 683.5
2135 Female, age 91, both hemispheres 831.8
2341 Male, age 80, both hemispheres 716.7
2371 Male, age 61, both hemispheres 689.4
2752 Female, age 85, both hemispheres 593.5
2070 Male, age 76, both hemispheres 586.2
Prepositus hypoglossal nucleus
nTPM: 657.5
2086 Male, age 80, both hemispheres 717.0
2855 Female, age 85, right hemisphere 598.0
Principal sensory trigeminal nucleus
nTPM: 497.3
2367 Female, age 91, left hemisphere 528.9
2158 Male, age 61, both hemispheres 517.3
2008 Male, age 80, left hemisphere 473.6
2324 Male, age 76, both hemispheres 469.4
Reticular pontine nucleus, caudal
nTPM: 602.5
2457 Female, age 91, both hemispheres 697.4
2559 Male, age 74, both hemispheres 634.8
2092 Male, age 76, both hemispheres 615.8
2332 Male, age 80, right hemisphere 462.1
Reticular pontine nucleus, oral
nTPM: 508.8
1939 Male, age 80, both hemispheres 555.1
2167 Male, age 76, both hemispheres 514.1
2366 Female, age 91, both hemispheres 512.0
2361 Male, age 74, both hemispheres 495.9
2012 Female, age 85, both hemispheres 466.9
Reticulotegmental nucleus
nTPM: 580.2
2452 Male, age 74, both hemispheres 693.2
2322 Female, age 91, both hemispheres 572.4
2333 Male, age 80, both hemispheres 561.4
2325 Male, age 76, both hemispheres 493.6
Spinal trigeminal nucleus, caudal
nTPM: 621.6
2642 Male, age 74, both hemispheres 721.2
2308 Male, age 80, both hemispheres 654.8
2447 Male, age 76, both hemispheres 622.0
2312 Male, age 61, both hemispheres 614.4
2390 Female, age 91, both hemispheres 495.8
Spinal trigeminal nucleus, interpolar
nTPM: 558.7
2033 Male, age 80, both hemispheres 653.5
2066 Male, age 76, right hemisphere 588.6
2386 Female, age 85, both hemispheres 566.7
2389 Female, age 91, both hemispheres 539.2
2625 Male, age 61, both hemispheres 445.7
Spinal trigeminal nucleus, oral
nTPM: 552.9
2164 Male, age 80, both hemispheres 627.8
1978 Male, age 76, both hemispheres 550.6
2737 Female, age 85, both hemispheres 480.4
Spinal vestibular nucleus
nTPM: 647.9
2384 Male, age 74, both hemispheres 915.7
2780 Male, age 80, both hemispheres 708.5
2748 Male, age 76, both hemispheres 631.3
2186 Female, age 91, both hemispheres 563.3
2796 Male, age 61, both hemispheres 536.4
2806 Female, age 85, both hemispheres 532.0
Subcoeruleus area
nTPM: 568.3
2451 Male, age 74, both hemispheres 768.8
2369 Female, age 85, left hemisphere 568.7
2089 Male, age 76, left hemisphere 517.9
2323 Female, age 91, left hemisphere 503.0
1958 Male, age 80, both hemispheres 482.9
Superior olive
nTPM: 525.1
2020 Male, age 76, both hemispheres 644.5
2561 Female, age 91, both hemispheres 581.4
2364 Male, age 74, right hemisphere 490.6
2329 Male, age 80, right hemisphere 462.4
1875 Female, age 85, both hemispheres 446.7
Superior vestibular nucleus
nTPM: 647.0
2015 Male, age 80, both hemispheres 701.3
2061 Male, age 76, both hemispheres 693.3
2383 Male, age 74, both hemispheres 546.4
Ventral medullary reticular nucleus
nTPM: 666.5
2372 Male, age 61, both hemispheres 681.4
2060 Male, age 76, both hemispheres 651.5
Ventral periolivary nuclei
nTPM: 524.8
2023 Male, age 76, both hemispheres 670.2
2794 Female, age 91, left hemisphere 503.3
2165 Male, age 80, both hemispheres 485.2
2130 Female, age 85, both hemispheres 440.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 679.4
2118 Male, age 80, both hemispheres 834.9
2302 Female, age 91, both hemispheres 754.0
2180 Male, age 61, both hemispheres 610.2
2741 Female, age 85, both hemispheres 603.4
1986 Male, age 76, both hemispheres 594.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 527.8
2161 Male, age 80, both hemispheres 606.4
2456 Female, age 91, both hemispheres 569.1
2359 Male, age 61, both hemispheres 559.5
1959 Male, age 76, both hemispheres 513.6
2449 Male, age 74, both hemispheres 498.6
2840 Female, age 85, both hemispheres 419.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 87.4
FF:10182-103D2 60 years, female 88.0
FF:10165-103B3 76 years, female 86.7
Medulla oblongata
Scaled Tags Per Million: 89.3
FF:10174-103C3 60 years, female 111.3
FF:10038-101F2 18-64 years, mixed 83.1
FF:10155-103A2 76 years, female 73.4
Pons
Scaled Tags Per Million: 66.4
FF:10033-101E6 18-54 years, mixed 66.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 3.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 3.7
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.1
Sample A Female 3.4
Sample B Female 4.7
Sample C Male 3.1
Sample D Male 3.7
Pons
nTPM: 2.7
Samples: 4

Max nTPM: 4.8
Min nTPM: 0.9
Sample A Female 0.9
Sample B Female 4.8
Sample C Male 1.9
Sample D Male 3.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 208.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 208.0
Samples: 4

Max nTPM: 226.5
Min nTPM: 180.5
Sample A Male 226.5
Sample B Male 180.5
Sample C Female 225.6
Sample D Female 199.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 10.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 10.0
69028599 Antisense, RP_050316_01_F06, Mouse strain C57BL/6J (56 days, male) 10.0
Pons
Expression energy: 9.7
69028599 Antisense, RP_050316_01_F06, Mouse strain C57BL/6J (56 days, male) 9.7

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