PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1518.9 nTPM
FANTOM5:4695.1 Scaled Tags Per Million
Pig:1609.8 nTPM
Mouse:2100.4 nTPM
Allen mouse:30.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1518.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1073.6
2188 Female, age 91, both hemispheres 1303.5
2301 Female, age 85, both hemispheres 1208.4
2090 Male, age 80, both hemispheres 1001.8
1984 Male, age 76, both hemispheres 780.8
Area postrema
nTPM: 962.5
2799 Male, age 61, both hemispheres 1306.3
2306 Male, age 80, both hemispheres 941.2
2054 Male, age 76, both hemispheres 640.1
Dorsal cochlear nucleus
nTPM: 811.1
2187 Female, age 91, both hemispheres 1144.6
2058 Male, age 76, both hemispheres 825.0
2802 Male, age 74, right hemisphere 722.7
2378 Male, age 80, both hemispheres 715.2
2370 Male, age 61, both hemispheres 647.7
Dorsal medullary reticular nucleus
nTPM: 858.7
2040 Female, age 85, both hemispheres 1164.0
2088 Male, age 76, both hemispheres 799.2
2373 Male, age 61, both hemispheres 612.8
Dorsal motor vagal complex
nTPM: 745.6
2844 Male, age 55, unknown 956.8
2000 Male, age 74, unknown 948.6
2133 Female, age 91, both hemispheres 934.4
2813 Female, age 72, unknown 792.5
2185 Male, age 76, both hemispheres 789.5
2643 Male, age 74, both hemispheres 626.0
2807 Female, age 85, both hemispheres 502.4
2797 Male, age 61, both hemispheres 414.2
Dorsal tegmental nucleus
nTPM: 926.4
2083 Male, age 80, both hemispheres 1083.5
2358 Male, age 61, both hemispheres 984.6
2326 Male, age 74, both hemispheres 969.5
1936 Male, age 76, left hemisphere 668.1
Dorsolateral tegmental area
nTPM: 1017.3
2751 Female, age 85, both hemispheres 1492.2
2337 Male, age 61, both hemispheres 1192.4
2654 Male, age 80, both hemispheres 934.5
2360 Male, age 74, both hemispheres 826.1
2141 Male, age 76, both hemispheres 641.3
Gigantocellular reticular nuclei, medullary
nTPM: 904.8
2387 Female, age 91, both hemispheres 1104.1
1876 Female, age 85, both hemispheres 1099.3
2314 Male, age 61, both hemispheres 1016.8
2310 Male, age 80, both hemispheres 829.3
2462 Male, age 74, both hemispheres 762.5
2022 Male, age 76, right hemisphere 617.1
Gigantocellular reticular nuclei, pars
nTPM: 825.4
2084 Female, age 85, both hemispheres 917.6
2168 Male, age 76, both hemispheres 892.9
2330 Male, age 80, both hemispheres 782.5
2706 Male, age 80, both hemispheres 771.9
2336 Male, age 61, both hemispheres 762.3
Inferior olive
nTPM: 1070.6
2563 Male, age 74, both hemispheres 1335.5
2085 Female, age 85, both hemispheres 1150.6
2628 Female, age 91, both hemispheres 1023.0
2379 Male, age 80, both hemispheres 937.7
2178 Male, age 61, both hemispheres 906.1
Kolliker-Fuse nucleus
nTPM: 1199.7
2793 Female, age 91, left hemisphere 1332.7
2315 Male, age 76, right hemisphere 1146.6
2163 Male, age 80, both hemispheres 1119.8
Lateral lemniscal nuclei
nTPM: 935.7
2320 Female, age 91, left hemisphere 1127.9
2169 Male, age 76, both hemispheres 978.4
2036 Male, age 80, both hemispheres 968.5
2746 Female, age 85, left hemisphere 809.7
2453 Male, age 74, right hemisphere 793.8
Lateral medullary reticular nucleus
nTPM: 1197.7
2305 Male, age 74, both hemispheres 1823.4
2852 Male, age 80, both hemispheres 1228.7
2190 Female, age 85, both hemispheres 1113.6
2804 Female, age 91, both hemispheres 1078.7
2044 Male, age 76, both hemispheres 1048.0
2374 Male, age 61, both hemispheres 893.8
Lateral parabrachial nucleus
nTPM: 1028.2
2792 Male, age 76, both hemispheres 1271.1
2790 Male, age 61, both hemispheres 1118.2
2013 Male, age 80, both hemispheres 947.7
2139 Female, age 85, right hemisphere 775.7
Lateral vestibular nucleus
nTPM: 937.1
2311 Male, age 80, both hemispheres 965.4
2184 Male, age 76, both hemispheres 908.7
Locus coeruleus
nTPM: 954.9
2014 Male, age 55, unknown 1191.3
2123 Female, age 91, both hemispheres 1074.9
2720 Male, age 74, both hemispheres 948.1
2317 Female, age 72, unknown 915.2
2788 Male, age 74, unknown 894.2
1980 Male, age 76, both hemispheres 846.8
2162 Male, age 80, both hemispheres 813.4
Medial olivary nucleus
nTPM: 1317.7
1962 Male, age 76, both hemispheres 1631.6
2138 Female, age 91, both hemispheres 1335.0
1943 Male, age 61, both hemispheres 1212.8
2851 Male, age 80, both hemispheres 1091.4
Medial parabrachial nucleus
nTPM: 1074.6
2170 Female, age 91, both hemispheres 1420.6
2463 Female, age 85, right hemisphere 1151.2
2156 Male, age 61, both hemispheres 1057.8
2854 Male, age 80, both hemispheres 963.7
2786 Male, age 76, both hemispheres 779.7
Medial periolivary nuclei
nTPM: 950.2
2791 Male, age 74, right hemisphere 1203.1
2063 Male, age 76, both hemispheres 1076.2
2081 Male, age 80, both hemispheres 911.4
2458 Female, age 91, both hemispheres 901.9
2171 Female, age 85, both hemispheres 658.4
Medial vestibular nucleus
nTPM: 981.1
2801 Male, age 74, both hemispheres 1455.5
2803 Female, age 91, both hemispheres 990.7
2743 Female, age 85, both hemispheres 923.6
2134 Male, age 76, both hemispheres 884.1
2093 Male, age 80, both hemispheres 880.6
2624 Male, age 61, both hemispheres 751.8
Motor facial nucleus
nTPM: 899.5
2365 Male, age 74, right hemisphere 1273.2
2062 Male, age 76, both hemispheres 1020.0
2697 Female, age 85, both hemispheres 921.1
2795 Female, age 91, both hemispheres 751.8
2126 Male, age 61, both hemispheres 741.9
2327 Male, age 80, both hemispheres 689.1
Motor hypoglossal nucleus
nTPM: 1021.0
2125 Female, age 91, both hemispheres 1192.5
2132 Female, age 85, both hemispheres 1175.1
2182 Male, age 80, both hemispheres 1071.8
2461 Male, age 61, both hemispheres 1004.6
2277 Male, age 76, both hemispheres 661.0
Motor trigeminal nucleus
nTPM: 838.7
2560 Male, age 74, both hemispheres 978.0
2321 Female, age 91, both hemispheres 917.8
2079 Male, age 80, both hemispheres 815.9
2309 Male, age 76, both hemispheres 792.3
2335 Male, age 61, both hemispheres 689.7
Nuclei of the trapezoid body
nTPM: 866.6
1983 Male, age 76, both hemispheres 1030.2
2159 Male, age 61, both hemispheres 904.7
2166 Male, age 80, both hemispheres 879.3
2368 Female, age 91, both hemispheres 826.2
2735 Female, age 85, both hemispheres 692.4
Nucleus ambiguus
nTPM: 1122.2
2071 Male, age 76, both hemispheres 1455.8
2096 Female, age 85, both hemispheres 788.6
Nucleus cuneatus
nTPM: 892.4
2808 Female, age 85, both hemispheres 1183.3
2380 Male, age 80, both hemispheres 1127.8
2564 Male, age 74, both hemispheres 1101.3
2381 Male, age 80, both hemispheres 961.9
2100 Male, age 76, both hemispheres 922.6
2131 Male, age 76, both hemispheres 839.5
2376 Male, age 61, both hemispheres 793.4
2562 Male, age 61, both hemispheres 565.9
2805 Female, age 91, both hemispheres 535.9
Nucleus gracilis
nTPM: 1037.6
2627 Male, age 74, both hemispheres 1307.1
2382 Male, age 80, both hemispheres 1044.4
2299 Female, age 85, both hemispheres 761.3
Nucleus raphe magnus
nTPM: 901.8
2160 Male, age 61, both hemispheres 1065.6
2455 Male, age 74, both hemispheres 1049.4
2459 Female, age 91, both hemispheres 956.2
2051 Male, age 76, both hemispheres 926.0
2328 Male, age 80, both hemispheres 819.4
2172 Female, age 85, both hemispheres 593.9
Nucleus raphe obscurus
nTPM: 1379.8
2845 Female, age 85, midline 1706.8
2142 Male, age 76, midline 1440.0
2800 Male, age 61, midline 992.5
Nucleus raphe pallidus
nTPM: 1518.9
1924 Male, age 61, midline 1856.1
2145 Male, age 76, midline 1435.2
2183 Male, age 80, midline 1265.6
Nucleus tractus solitarii
nTPM: 645.0
2144 Female, age 91, right hemisphere 741.0
2656 Male, age 76, both hemispheres 638.7
2191 Female, age 85, both hemispheres 634.2
2307 Male, age 80, both hemispheres 566.0
Paramedian reticular nucleus
nTPM: 978.0
2057 Male, age 80, both hemispheres 1203.2
2050 Female, age 85, both hemispheres 993.0
2052 Male, age 76, both hemispheres 935.4
2313 Male, age 61, both hemispheres 780.3
Parvicellular reticular nuclei
nTPM: 937.6
2119 Male, age 80, both hemispheres 1182.9
2095 Male, age 76, both hemispheres 990.8
2558 Male, age 74, both hemispheres 639.2
Parvicellular reticular nuclei, medullary
nTPM: 892.5
2189 Female, age 91, both hemispheres 987.1
2091 Female, age 85, both hemispheres 972.9
2181 Male, age 80, left hemisphere 717.6
Pedunculopontine tegmental nucleus
nTPM: 1050.4
2338 Male, age 61, both hemispheres 1341.8
2334 Male, age 80, both hemispheres 977.4
1921 Female, age 85, both hemispheres 832.1
Peritrigeminal nucleus
nTPM: 1180.0
2067 Female, age 85, both hemispheres 1264.6
2136 Male, age 76, both hemispheres 1226.6
2179 Male, age 61, both hemispheres 1048.8
Pontine nuclei
nTPM: 1091.8
2454 Male, age 74, left hemisphere 1580.1
2319 Female, age 91, both hemispheres 1269.9
2109 Female, age 72, unknown 1235.6
1863 Male, age 55, unknown 1135.9
2727 Male, age 61, right hemisphere 1017.9
1968 Male, age 76, left hemisphere 882.1
2787 Female, age 85, both hemispheres 833.0
2115 Male, age 80, left hemisphere 779.7
Pontine raphe nucleus
nTPM: 781.4
2122 Female, age 85, midline 832.4
2853 Male, age 76, midline 730.4
Posteroventral cochlear nucleus
nTPM: 1020.5
2135 Female, age 91, both hemispheres 1341.1
2341 Male, age 80, both hemispheres 1225.5
2070 Male, age 76, both hemispheres 1052.6
2371 Male, age 61, both hemispheres 745.7
2752 Female, age 85, both hemispheres 737.5
Prepositus hypoglossal nucleus
nTPM: 1007.0
2855 Female, age 85, right hemisphere 1262.3
2086 Male, age 80, both hemispheres 751.8
Principal sensory trigeminal nucleus
nTPM: 967.3
2367 Female, age 91, left hemisphere 1227.2
2158 Male, age 61, both hemispheres 1016.2
2324 Male, age 76, both hemispheres 854.1
2008 Male, age 80, left hemisphere 771.8
Reticular pontine nucleus, caudal
nTPM: 1002.5
2092 Male, age 76, both hemispheres 1166.6
2559 Male, age 74, both hemispheres 1101.3
2457 Female, age 91, both hemispheres 1054.9
2332 Male, age 80, right hemisphere 687.1
Reticular pontine nucleus, oral
nTPM: 1133.8
2361 Male, age 74, both hemispheres 1518.6
2366 Female, age 91, both hemispheres 1156.8
1939 Male, age 80, both hemispheres 1077.0
2012 Female, age 85, both hemispheres 1046.7
2167 Male, age 76, both hemispheres 870.1
Reticulotegmental nucleus
nTPM: 790.0
2322 Female, age 91, both hemispheres 885.0
2452 Male, age 74, both hemispheres 770.8
2333 Male, age 80, both hemispheres 753.4
2325 Male, age 76, both hemispheres 750.7
Spinal trigeminal nucleus, caudal
nTPM: 928.9
2390 Female, age 91, both hemispheres 1082.6
2308 Male, age 80, both hemispheres 961.4
2447 Male, age 76, both hemispheres 922.1
2312 Male, age 61, both hemispheres 845.0
2642 Male, age 74, both hemispheres 833.3
Spinal trigeminal nucleus, interpolar
nTPM: 993.2
2625 Male, age 61, both hemispheres 1291.3
2066 Male, age 76, right hemisphere 1161.9
2033 Male, age 80, both hemispheres 922.6
2389 Female, age 91, both hemispheres 813.2
2386 Female, age 85, both hemispheres 777.2
Spinal trigeminal nucleus, oral
nTPM: 850.1
2164 Male, age 80, both hemispheres 973.8
2737 Female, age 85, both hemispheres 840.7
1978 Male, age 76, both hemispheres 736.0
Spinal vestibular nucleus
nTPM: 910.2
2748 Male, age 76, both hemispheres 1121.8
2806 Female, age 85, both hemispheres 1005.7
2384 Male, age 74, both hemispheres 971.1
2186 Female, age 91, both hemispheres 915.6
2780 Male, age 80, both hemispheres 882.7
2796 Male, age 61, both hemispheres 564.1
Subcoeruleus area
nTPM: 922.0
2369 Female, age 85, left hemisphere 1499.0
1958 Male, age 80, both hemispheres 894.8
2089 Male, age 76, left hemisphere 805.5
2323 Female, age 91, left hemisphere 775.2
2451 Male, age 74, both hemispheres 635.4
Superior olive
nTPM: 999.1
2364 Male, age 74, right hemisphere 1383.1
2020 Male, age 76, both hemispheres 1062.6
1875 Female, age 85, both hemispheres 892.4
2329 Male, age 80, right hemisphere 876.4
2561 Female, age 91, both hemispheres 780.9
Superior vestibular nucleus
nTPM: 1009.0
2383 Male, age 74, both hemispheres 1051.8
2061 Male, age 76, both hemispheres 993.6
2015 Male, age 80, both hemispheres 981.5
Ventral medullary reticular nucleus
nTPM: 977.3
2060 Male, age 76, both hemispheres 1039.5
2372 Male, age 61, both hemispheres 915.1
Ventral periolivary nuclei
nTPM: 845.8
2023 Male, age 76, both hemispheres 1179.9
2165 Male, age 80, both hemispheres 818.8
2130 Female, age 85, both hemispheres 723.9
2794 Female, age 91, left hemisphere 660.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1013.4
1986 Male, age 76, both hemispheres 1105.1
2118 Male, age 80, both hemispheres 1017.4
2741 Female, age 85, both hemispheres 1010.7
2180 Male, age 61, both hemispheres 973.4
2302 Female, age 91, both hemispheres 960.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 992.2
2359 Male, age 61, both hemispheres 1240.0
1959 Male, age 76, both hemispheres 1035.9
2456 Female, age 91, both hemispheres 960.7
2449 Male, age 74, both hemispheres 951.0
2840 Female, age 85, both hemispheres 935.8
2161 Male, age 80, both hemispheres 830.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 4695.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 2326.1
FF:10182-103D2 60 years, female 3024.2
FF:10165-103B3 76 years, female 1628.0
Medulla oblongata
Scaled Tags Per Million: 2943.0
FF:10038-101F2 18-64 years, mixed 4526.4
FF:10174-103C3 60 years, female 2949.2
FF:10155-103A2 76 years, female 1353.3
Pons
Scaled Tags Per Million: 4695.1
FF:10033-101E6 18-54 years, mixed 4695.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 1609.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1609.8
Samples: 4

Max nTPM: 1972.3
Min nTPM: 1224.6
Sample A Female 1434.0
Sample B Female 1224.6
Sample C Male 1972.3
Sample D Male 1808.4
Pons
nTPM: 1280.5
Samples: 4

Max nTPM: 1428.5
Min nTPM: 1099.8
Sample A Female 1099.8
Sample B Female 1171.8
Sample C Male 1428.5
Sample D Male 1421.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 2100.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 2100.4
Samples: 4

Max nTPM: 2203.7
Min nTPM: 1931.8
Sample A Male 2062.5
Sample B Male 1931.8
Sample C Female 2203.7
Sample D Female 2203.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 30.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 30.5
68844164 Antisense, RP_050222_01_A07, Mouse strain C57BL/6J (56 days, male) 30.5
Pons
Expression energy: 29.6
68844164 Antisense, RP_050222_01_A07, Mouse strain C57BL/6J (56 days, male) 29.6

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