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TTYH1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:431.3 nTPM
FANTOM5:250.4 Scaled Tags Per Million
Pig:122.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA023617Antibody HPA050655
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

431.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 431.3
Samples: 246

Max nTPM: 1174.2
Min nTPM: 86.9
Std nTPM: 189.4
Median nTPM: 400.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1174.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1109.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1020.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 989.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 958.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 916.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 891.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 873.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 866.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 850.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 826.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 783.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 778.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 766.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 758.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 749.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 749.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 724.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 720.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 709.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 690.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 690.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 685.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 677.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 673.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 672.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 666.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 661.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 642.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 641.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 638.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 637.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 633.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 631.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 631.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 626.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 624.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 623.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 605.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 604.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 603.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 599.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 598.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 597.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 589.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 585.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 581.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 580.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 580.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 579.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 578.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 574.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 560.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 560.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 553.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 551.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 550.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 544.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 541.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 541.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 537.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 533.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 531.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 531.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 531.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 529.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 523.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 520.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 517.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 507.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 506.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 502.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 501.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 500.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 498.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 495.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 493.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 489.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 487.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 486.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 480.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 479.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 478.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 478.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 475.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 467.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 466.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 464.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 463.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 460.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 459.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 458.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 457.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 455.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 452.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 448.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 446.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 445.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 444.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 444.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 443.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 443.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 442.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 436.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 436.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 435.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 434.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 432.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 429.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 428.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 425.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 422.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 421.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 420.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 418.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 416.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 412.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 410.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 409.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 404.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 403.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 402.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 401.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 399.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 396.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 395.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 395.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 392.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 391.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 391.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 384.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 383.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 382.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 381.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 379.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 377.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 377.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 375.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 369.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 367.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 367.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 366.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 366.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 365.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 363.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 362.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 362.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 359.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 358.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 357.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 357.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 355.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 354.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 353.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 350.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 349.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 348.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 345.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 344.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 344.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 342.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 342.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 341.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 337.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 336.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 335.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 335.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 330.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 327.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 322.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 321.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 316.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 315.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 313.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 312.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 311.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 311.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 310.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 303.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 303.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 300.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 299.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 299.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 298.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 297.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 296.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 294.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 293.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 291.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 291.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 287.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 284.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 282.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 282.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 281.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 278.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 278.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 274.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 274.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 269.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 267.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 266.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 265.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 265.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 258.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 257.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 255.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 254.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 252.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 246.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 244.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 242.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 239.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 233.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 231.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 230.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 230.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 224.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 222.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 221.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 217.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 216.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 214.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 213.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 211.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 210.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 205.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 204.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 202.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 202.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 198.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 189.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 187.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 184.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 176.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 167.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 158.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 146.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 144.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 143.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 141.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 140.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 107.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 103.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 96.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 86.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

250.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 250.4
FF:10164-103B2 76 years, female 250.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.4
Pig sample Sample description nTPM
Caudate
nTPM: 122.5
Samples: 4

Max nTPM: 145.9
Min nTPM: 83.0
Sample A Female 83.0
Sample B Female 138.7
Sample C Male 145.9
Sample D Male 122.2

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