PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:374.5 nTPM
FANTOM5:339.8 Scaled Tags Per Million
Pig:156.8 nTPM
Mouse:65.5 nTPM
Allen mouse:6.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 374.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 85.8
1984 Male, age 76, both hemispheres 114.0
2301 Female, age 85, both hemispheres 87.4
2090 Male, age 80, both hemispheres 80.7
2188 Female, age 91, both hemispheres 61.0
Area postrema
nTPM: 91.0
2054 Male, age 76, both hemispheres 189.0
2799 Male, age 61, both hemispheres 53.5
2306 Male, age 80, both hemispheres 30.5
Dorsal cochlear nucleus
nTPM: 113.0
2058 Male, age 76, both hemispheres 174.9
2370 Male, age 61, both hemispheres 137.1
2187 Female, age 91, both hemispheres 115.9
2802 Male, age 74, right hemisphere 73.4
2378 Male, age 80, both hemispheres 63.5
Dorsal medullary reticular nucleus
nTPM: 184.9
2040 Female, age 85, both hemispheres 280.7
2088 Male, age 76, both hemispheres 152.9
2373 Male, age 61, both hemispheres 121.1
Dorsal motor vagal complex
nTPM: 195.1
2133 Female, age 91, both hemispheres 367.1
2844 Male, age 55, unknown 275.2
2000 Male, age 74, unknown 238.0
2813 Female, age 72, unknown 204.5
2643 Male, age 74, both hemispheres 148.8
2797 Male, age 61, both hemispheres 135.3
2807 Female, age 85, both hemispheres 102.4
2185 Male, age 76, both hemispheres 89.4
Dorsal tegmental nucleus
nTPM: 124.5
2083 Male, age 80, both hemispheres 170.7
1936 Male, age 76, left hemisphere 132.9
2358 Male, age 61, both hemispheres 112.0
2326 Male, age 74, both hemispheres 82.5
Dorsolateral tegmental area
nTPM: 132.8
2141 Male, age 76, both hemispheres 188.5
2654 Male, age 80, both hemispheres 169.8
2751 Female, age 85, both hemispheres 139.7
2360 Male, age 74, both hemispheres 113.7
2337 Male, age 61, both hemispheres 52.3
Gigantocellular reticular nuclei, medullary
nTPM: 149.6
2462 Male, age 74, both hemispheres 280.4
1876 Female, age 85, both hemispheres 170.3
2022 Male, age 76, right hemisphere 146.2
2310 Male, age 80, both hemispheres 135.2
2387 Female, age 91, both hemispheres 84.5
2314 Male, age 61, both hemispheres 81.0
Gigantocellular reticular nuclei, pars
nTPM: 155.0
2168 Male, age 76, both hemispheres 221.4
2084 Female, age 85, both hemispheres 219.6
2336 Male, age 61, both hemispheres 158.8
2706 Male, age 80, both hemispheres 88.6
2330 Male, age 80, both hemispheres 86.6
Inferior olive
nTPM: 63.1
2085 Female, age 85, both hemispheres 108.3
2178 Male, age 61, both hemispheres 61.5
2628 Female, age 91, both hemispheres 52.9
2563 Male, age 74, both hemispheres 48.2
2379 Male, age 80, both hemispheres 44.7
Kolliker-Fuse nucleus
nTPM: 139.4
2163 Male, age 80, both hemispheres 252.3
2315 Male, age 76, right hemisphere 90.1
2793 Female, age 91, left hemisphere 76.0
Lateral lemniscal nuclei
nTPM: 173.7
2036 Male, age 80, both hemispheres 213.5
2169 Male, age 76, both hemispheres 207.1
2453 Male, age 74, right hemisphere 183.4
2746 Female, age 85, left hemisphere 175.2
2320 Female, age 91, left hemisphere 89.4
Lateral medullary reticular nucleus
nTPM: 103.4
2044 Male, age 76, both hemispheres 196.0
2190 Female, age 85, both hemispheres 129.3
2804 Female, age 91, both hemispheres 81.6
2852 Male, age 80, both hemispheres 78.6
2374 Male, age 61, both hemispheres 73.6
2305 Male, age 74, both hemispheres 61.2
Lateral parabrachial nucleus
nTPM: 140.6
2139 Female, age 85, right hemisphere 205.8
2790 Male, age 61, both hemispheres 178.1
2013 Male, age 80, both hemispheres 127.5
2792 Male, age 76, both hemispheres 51.2
Lateral vestibular nucleus
nTPM: 178.1
2184 Male, age 76, both hemispheres 235.5
2311 Male, age 80, both hemispheres 120.7
Locus coeruleus
nTPM: 374.5
2123 Female, age 91, both hemispheres 557.6
2014 Male, age 55, unknown 402.1
2720 Male, age 74, both hemispheres 398.2
1980 Male, age 76, both hemispheres 365.7
2317 Female, age 72, unknown 318.5
2162 Male, age 80, both hemispheres 297.1
2788 Male, age 74, unknown 282.6
Medial olivary nucleus
nTPM: 43.9
2851 Male, age 80, both hemispheres 66.7
1962 Male, age 76, both hemispheres 48.2
2138 Female, age 91, both hemispheres 35.1
1943 Male, age 61, both hemispheres 25.5
Medial parabrachial nucleus
nTPM: 149.5
2156 Male, age 61, both hemispheres 174.9
2786 Male, age 76, both hemispheres 159.6
2170 Female, age 91, both hemispheres 157.4
2854 Male, age 80, both hemispheres 132.5
2463 Female, age 85, right hemisphere 123.1
Medial periolivary nuclei
nTPM: 167.4
2171 Female, age 85, both hemispheres 252.8
2063 Male, age 76, both hemispheres 249.5
2791 Male, age 74, right hemisphere 158.9
2458 Female, age 91, both hemispheres 89.1
2081 Male, age 80, both hemispheres 86.8
Medial vestibular nucleus
nTPM: 188.5
2134 Male, age 76, both hemispheres 283.8
2624 Male, age 61, both hemispheres 212.1
2743 Female, age 85, both hemispheres 183.0
2093 Male, age 80, both hemispheres 164.8
2803 Female, age 91, both hemispheres 162.0
2801 Male, age 74, both hemispheres 125.5
Motor facial nucleus
nTPM: 165.9
2062 Male, age 76, both hemispheres 268.6
2365 Male, age 74, right hemisphere 176.6
2126 Male, age 61, both hemispheres 155.7
2327 Male, age 80, both hemispheres 148.4
2697 Female, age 85, both hemispheres 128.3
2795 Female, age 91, both hemispheres 117.8
Motor hypoglossal nucleus
nTPM: 201.6
2461 Male, age 61, both hemispheres 237.8
2132 Female, age 85, both hemispheres 215.9
2277 Male, age 76, both hemispheres 214.6
2125 Female, age 91, both hemispheres 190.0
2182 Male, age 80, both hemispheres 149.9
Motor trigeminal nucleus
nTPM: 145.3
2309 Male, age 76, both hemispheres 176.6
2079 Male, age 80, both hemispheres 158.4
2335 Male, age 61, both hemispheres 157.9
2560 Male, age 74, both hemispheres 156.7
2321 Female, age 91, both hemispheres 76.8
Nuclei of the trapezoid body
nTPM: 201.2
2735 Female, age 85, both hemispheres 270.3
1983 Male, age 76, both hemispheres 254.7
2159 Male, age 61, both hemispheres 248.6
2166 Male, age 80, both hemispheres 126.5
2368 Female, age 91, both hemispheres 106.0
Nucleus ambiguus
nTPM: 186.9
2096 Female, age 85, both hemispheres 303.0
2071 Male, age 76, both hemispheres 70.7
Nucleus cuneatus
nTPM: 92.1
2562 Male, age 61, both hemispheres 164.8
2131 Male, age 76, both hemispheres 157.4
2100 Male, age 76, both hemispheres 115.1
2376 Male, age 61, both hemispheres 108.8
2564 Male, age 74, both hemispheres 91.4
2381 Male, age 80, both hemispheres 54.6
2805 Female, age 91, both hemispheres 52.8
2808 Female, age 85, both hemispheres 48.9
2380 Male, age 80, both hemispheres 34.7
Nucleus gracilis
nTPM: 46.9
2627 Male, age 74, both hemispheres 75.1
2299 Female, age 85, both hemispheres 38.2
2382 Male, age 80, both hemispheres 27.3
Nucleus raphe magnus
nTPM: 201.9
2160 Male, age 61, both hemispheres 328.6
2172 Female, age 85, both hemispheres 268.4
2455 Male, age 74, both hemispheres 225.6
2051 Male, age 76, both hemispheres 160.7
2328 Male, age 80, both hemispheres 132.5
2459 Female, age 91, both hemispheres 95.8
Nucleus raphe obscurus
nTPM: 85.9
2800 Male, age 61, midline 122.6
2845 Female, age 85, midline 102.9
2142 Male, age 76, midline 32.2
Nucleus raphe pallidus
nTPM: 105.6
2183 Male, age 80, midline 219.1
1924 Male, age 61, midline 73.2
2145 Male, age 76, midline 24.6
Nucleus tractus solitarii
nTPM: 191.0
2656 Male, age 76, both hemispheres 237.8
2307 Male, age 80, both hemispheres 197.8
2144 Female, age 91, right hemisphere 178.9
2191 Female, age 85, both hemispheres 149.6
Paramedian reticular nucleus
nTPM: 217.1
2313 Male, age 61, both hemispheres 273.0
2057 Male, age 80, both hemispheres 262.0
2050 Female, age 85, both hemispheres 216.3
2052 Male, age 76, both hemispheres 117.0
Parvicellular reticular nuclei
nTPM: 188.3
2558 Male, age 74, both hemispheres 221.6
2119 Male, age 80, both hemispheres 203.5
2095 Male, age 76, both hemispheres 139.8
Parvicellular reticular nuclei, medullary
nTPM: 218.1
2189 Female, age 91, both hemispheres 247.8
2091 Female, age 85, both hemispheres 226.1
2181 Male, age 80, left hemisphere 180.5
Pedunculopontine tegmental nucleus
nTPM: 167.3
2334 Male, age 80, both hemispheres 226.4
1921 Female, age 85, both hemispheres 188.7
2338 Male, age 61, both hemispheres 86.8
Peritrigeminal nucleus
nTPM: 155.7
2067 Female, age 85, both hemispheres 170.3
2179 Male, age 61, both hemispheres 167.4
2136 Male, age 76, both hemispheres 129.6
Pontine nuclei
nTPM: 181.2
2787 Female, age 85, both hemispheres 300.7
2727 Male, age 61, right hemisphere 281.0
1968 Male, age 76, left hemisphere 216.9
2109 Female, age 72, unknown 190.8
1863 Male, age 55, unknown 188.7
2115 Male, age 80, left hemisphere 106.3
2454 Male, age 74, left hemisphere 96.3
2319 Female, age 91, both hemispheres 68.8
Pontine raphe nucleus
nTPM: 228.3
2122 Female, age 85, midline 238.3
2853 Male, age 76, midline 218.3
Posteroventral cochlear nucleus
nTPM: 109.2
2752 Female, age 85, both hemispheres 209.4
2070 Male, age 76, both hemispheres 163.7
2371 Male, age 61, both hemispheres 114.1
2341 Male, age 80, both hemispheres 33.9
2135 Female, age 91, both hemispheres 24.8
Prepositus hypoglossal nucleus
nTPM: 138.4
2855 Female, age 85, right hemisphere 158.9
2086 Male, age 80, both hemispheres 117.9
Principal sensory trigeminal nucleus
nTPM: 189.1
2158 Male, age 61, both hemispheres 279.8
2324 Male, age 76, both hemispheres 203.6
2008 Male, age 80, left hemisphere 192.7
2367 Female, age 91, left hemisphere 80.3
Reticular pontine nucleus, caudal
nTPM: 115.5
2092 Male, age 76, both hemispheres 172.4
2332 Male, age 80, right hemisphere 143.6
2559 Male, age 74, both hemispheres 89.6
2457 Female, age 91, both hemispheres 56.3
Reticular pontine nucleus, oral
nTPM: 158.1
2361 Male, age 74, both hemispheres 237.1
2012 Female, age 85, both hemispheres 194.7
1939 Male, age 80, both hemispheres 154.6
2167 Male, age 76, both hemispheres 151.8
2366 Female, age 91, both hemispheres 52.3
Reticulotegmental nucleus
nTPM: 152.2
2325 Male, age 76, both hemispheres 208.2
2452 Male, age 74, both hemispheres 161.1
2333 Male, age 80, both hemispheres 132.5
2322 Female, age 91, both hemispheres 107.0
Spinal trigeminal nucleus, caudal
nTPM: 156.3
2390 Female, age 91, both hemispheres 330.4
2447 Male, age 76, both hemispheres 167.1
2308 Male, age 80, both hemispheres 119.0
2312 Male, age 61, both hemispheres 85.9
2642 Male, age 74, both hemispheres 79.1
Spinal trigeminal nucleus, interpolar
nTPM: 239.3
2625 Male, age 61, both hemispheres 401.6
2066 Male, age 76, right hemisphere 266.4
2033 Male, age 80, both hemispheres 234.7
2386 Female, age 85, both hemispheres 165.1
2389 Female, age 91, both hemispheres 128.5
Spinal trigeminal nucleus, oral
nTPM: 186.1
2737 Female, age 85, both hemispheres 209.8
2164 Male, age 80, both hemispheres 184.1
1978 Male, age 76, both hemispheres 164.4
Spinal vestibular nucleus
nTPM: 170.8
2780 Male, age 80, both hemispheres 232.6
2186 Female, age 91, both hemispheres 205.2
2748 Male, age 76, both hemispheres 177.4
2796 Male, age 61, both hemispheres 155.6
2806 Female, age 85, both hemispheres 153.4
2384 Male, age 74, both hemispheres 100.6
Subcoeruleus area
nTPM: 182.4
2323 Female, age 91, left hemisphere 305.4
1958 Male, age 80, both hemispheres 186.1
2451 Male, age 74, both hemispheres 157.9
2089 Male, age 76, left hemisphere 157.7
2369 Female, age 85, left hemisphere 104.9
Superior olive
nTPM: 154.6
1875 Female, age 85, both hemispheres 215.2
2364 Male, age 74, right hemisphere 157.6
2020 Male, age 76, both hemispheres 152.0
2561 Female, age 91, both hemispheres 128.4
2329 Male, age 80, right hemisphere 119.6
Superior vestibular nucleus
nTPM: 136.6
2015 Male, age 80, both hemispheres 178.2
2061 Male, age 76, both hemispheres 141.7
2383 Male, age 74, both hemispheres 89.9
Ventral medullary reticular nucleus
nTPM: 157.5
2060 Male, age 76, both hemispheres 199.0
2372 Male, age 61, both hemispheres 116.0
Ventral periolivary nuclei
nTPM: 180.4
2130 Female, age 85, both hemispheres 247.6
2165 Male, age 80, both hemispheres 190.6
2023 Male, age 76, both hemispheres 144.4
2794 Female, age 91, left hemisphere 139.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 132.5
2741 Female, age 85, both hemispheres 197.2
1986 Male, age 76, both hemispheres 168.9
2180 Male, age 61, both hemispheres 146.5
2302 Female, age 91, both hemispheres 80.4
2118 Male, age 80, both hemispheres 69.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 148.6
2449 Male, age 74, both hemispheres 221.5
2359 Male, age 61, both hemispheres 183.1
1959 Male, age 76, both hemispheres 158.0
2840 Female, age 85, both hemispheres 144.1
2161 Male, age 80, both hemispheres 120.4
2456 Female, age 91, both hemispheres 64.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 339.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 248.2
FF:10182-103D2 60 years, female 274.8
FF:10165-103B3 76 years, female 221.6
Medulla oblongata
Scaled Tags Per Million: 179.0
FF:10038-101F2 18-64 years, mixed 236.2
FF:10174-103C3 60 years, female 169.5
FF:10155-103A2 76 years, female 131.4
Pons
Scaled Tags Per Million: 339.8
FF:10033-101E6 18-54 years, mixed 339.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 156.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 131.2
Samples: 4

Max nTPM: 155.7
Min nTPM: 105.8
Sample A Female 129.3
Sample B Female 133.9
Sample C Male 155.7
Sample D Male 105.8
Pons
nTPM: 156.8
Samples: 4

Max nTPM: 181.3
Min nTPM: 133.8
Sample A Female 150.7
Sample B Female 161.4
Sample C Male 181.3
Sample D Male 133.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 65.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 65.5
Samples: 4

Max nTPM: 69.3
Min nTPM: 60.2
Sample A Male 69.2
Sample B Male 63.2
Sample C Female 69.3
Sample D Female 60.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.2
68798085 Antisense, RP_050215_01_G03, Mouse strain C57BL/6J (56 days, male) 6.2
Pons
Expression energy: 5.2
68798085 Antisense, RP_050215_01_G03, Mouse strain C57BL/6J (56 days, male) 5.2

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