PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:37.9 nTPM
FANTOM5:10.7 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:10.5 nTPM
Allen mouse:0.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 37.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 25.9
2090 Male, age 80, both hemispheres 29.2
1984 Male, age 76, both hemispheres 26.7
2188 Female, age 91, both hemispheres 24.4
2301 Female, age 85, both hemispheres 23.2
Area postrema
nTPM: 30.2
2054 Male, age 76, both hemispheres 32.4
2799 Male, age 61, both hemispheres 30.0
2306 Male, age 80, both hemispheres 28.1
Dorsal cochlear nucleus
nTPM: 29.4
2370 Male, age 61, both hemispheres 34.3
2378 Male, age 80, both hemispheres 29.5
2058 Male, age 76, both hemispheres 28.8
2802 Male, age 74, right hemisphere 28.8
2187 Female, age 91, both hemispheres 25.5
Dorsal medullary reticular nucleus
nTPM: 28.8
2040 Female, age 85, both hemispheres 30.4
2373 Male, age 61, both hemispheres 30.1
2088 Male, age 76, both hemispheres 25.9
Dorsal motor vagal complex
nTPM: 32.5
2844 Male, age 55, unknown 39.2
2813 Female, age 72, unknown 35.1
2643 Male, age 74, both hemispheres 34.5
2797 Male, age 61, both hemispheres 32.7
2807 Female, age 85, both hemispheres 30.8
2133 Female, age 91, both hemispheres 30.7
2185 Male, age 76, both hemispheres 30.0
2000 Male, age 74, unknown 27.4
Dorsal tegmental nucleus
nTPM: 30.9
2358 Male, age 61, both hemispheres 40.8
2083 Male, age 80, both hemispheres 29.1
1936 Male, age 76, left hemisphere 27.8
2326 Male, age 74, both hemispheres 26.0
Dorsolateral tegmental area
nTPM: 28.8
2337 Male, age 61, both hemispheres 35.3
2141 Male, age 76, both hemispheres 32.1
2654 Male, age 80, both hemispheres 28.6
2751 Female, age 85, both hemispheres 24.8
2360 Male, age 74, both hemispheres 23.0
Gigantocellular reticular nuclei, medullary
nTPM: 28.6
2310 Male, age 80, both hemispheres 32.5
2387 Female, age 91, both hemispheres 29.6
2462 Male, age 74, both hemispheres 28.7
2022 Male, age 76, right hemisphere 27.5
1876 Female, age 85, both hemispheres 27.1
2314 Male, age 61, both hemispheres 26.1
Gigantocellular reticular nuclei, pars
nTPM: 32.0
2706 Male, age 80, both hemispheres 33.7
2336 Male, age 61, both hemispheres 32.8
2330 Male, age 80, both hemispheres 32.1
2168 Male, age 76, both hemispheres 31.1
2084 Female, age 85, both hemispheres 30.5
Inferior olive
nTPM: 25.6
2628 Female, age 91, both hemispheres 29.1
2379 Male, age 80, both hemispheres 27.0
2178 Male, age 61, both hemispheres 26.5
2563 Male, age 74, both hemispheres 24.1
2085 Female, age 85, both hemispheres 21.4
Kolliker-Fuse nucleus
nTPM: 27.4
2163 Male, age 80, both hemispheres 31.0
2793 Female, age 91, left hemisphere 26.8
2315 Male, age 76, right hemisphere 24.5
Lateral lemniscal nuclei
nTPM: 27.5
2169 Male, age 76, both hemispheres 28.7
2453 Male, age 74, right hemisphere 28.7
2320 Female, age 91, left hemisphere 27.9
2036 Male, age 80, both hemispheres 26.1
2746 Female, age 85, left hemisphere 26.1
Lateral medullary reticular nucleus
nTPM: 26.8
2852 Male, age 80, both hemispheres 32.8
2044 Male, age 76, both hemispheres 30.6
2374 Male, age 61, both hemispheres 27.2
2804 Female, age 91, both hemispheres 25.2
2190 Female, age 85, both hemispheres 24.8
2305 Male, age 74, both hemispheres 19.9
Lateral parabrachial nucleus
nTPM: 29.4
2790 Male, age 61, both hemispheres 39.0
2139 Female, age 85, right hemisphere 27.9
2013 Male, age 80, both hemispheres 27.5
2792 Male, age 76, both hemispheres 23.3
Lateral vestibular nucleus
nTPM: 29.0
2184 Male, age 76, both hemispheres 30.3
2311 Male, age 80, both hemispheres 27.8
Locus coeruleus
nTPM: 37.9
2720 Male, age 74, both hemispheres 46.3
2014 Male, age 55, unknown 42.5
2317 Female, age 72, unknown 38.5
1980 Male, age 76, both hemispheres 36.5
2162 Male, age 80, both hemispheres 34.7
2123 Female, age 91, both hemispheres 33.7
2788 Male, age 74, unknown 33.3
Medial olivary nucleus
nTPM: 22.6
2851 Male, age 80, both hemispheres 30.0
1943 Male, age 61, both hemispheres 21.9
2138 Female, age 91, both hemispheres 19.7
1962 Male, age 76, both hemispheres 18.9
Medial parabrachial nucleus
nTPM: 32.7
2156 Male, age 61, both hemispheres 38.5
2463 Female, age 85, right hemisphere 36.9
2786 Male, age 76, both hemispheres 31.3
2854 Male, age 80, both hemispheres 31.0
2170 Female, age 91, both hemispheres 25.6
Medial periolivary nuclei
nTPM: 27.2
2063 Male, age 76, both hemispheres 28.7
2171 Female, age 85, both hemispheres 27.9
2081 Male, age 80, both hemispheres 27.8
2458 Female, age 91, both hemispheres 27.2
2791 Male, age 74, right hemisphere 24.7
Medial vestibular nucleus
nTPM: 28.1
2624 Male, age 61, both hemispheres 34.9
2134 Male, age 76, both hemispheres 29.7
2093 Male, age 80, both hemispheres 27.6
2803 Female, age 91, both hemispheres 25.8
2743 Female, age 85, both hemispheres 25.5
2801 Male, age 74, both hemispheres 25.2
Motor facial nucleus
nTPM: 29.3
2327 Male, age 80, both hemispheres 32.0
2126 Male, age 61, both hemispheres 30.1
2795 Female, age 91, both hemispheres 29.2
2697 Female, age 85, both hemispheres 29.1
2062 Male, age 76, both hemispheres 28.7
2365 Male, age 74, right hemisphere 26.5
Motor hypoglossal nucleus
nTPM: 29.8
2182 Male, age 80, both hemispheres 33.0
2132 Female, age 85, both hemispheres 29.5
2461 Male, age 61, both hemispheres 29.3
2277 Male, age 76, both hemispheres 29.2
2125 Female, age 91, both hemispheres 28.0
Motor trigeminal nucleus
nTPM: 30.2
2335 Male, age 61, both hemispheres 35.4
2560 Male, age 74, both hemispheres 30.5
2079 Male, age 80, both hemispheres 28.9
2309 Male, age 76, both hemispheres 28.9
2321 Female, age 91, both hemispheres 27.4
Nuclei of the trapezoid body
nTPM: 27.6
2166 Male, age 80, both hemispheres 32.6
2735 Female, age 85, both hemispheres 29.9
1983 Male, age 76, both hemispheres 27.1
2368 Female, age 91, both hemispheres 27.1
2159 Male, age 61, both hemispheres 21.5
Nucleus ambiguus
nTPM: 31.5
2096 Female, age 85, both hemispheres 41.4
2071 Male, age 76, both hemispheres 21.6
Nucleus cuneatus
nTPM: 29.7
2562 Male, age 61, both hemispheres 34.7
2805 Female, age 91, both hemispheres 31.5
2380 Male, age 80, both hemispheres 30.7
2376 Male, age 61, both hemispheres 30.2
2381 Male, age 80, both hemispheres 29.9
2131 Male, age 76, both hemispheres 28.7
2100 Male, age 76, both hemispheres 28.2
2564 Male, age 74, both hemispheres 27.7
2808 Female, age 85, both hemispheres 26.0
Nucleus gracilis
nTPM: 27.2
2382 Male, age 80, both hemispheres 30.1
2627 Male, age 74, both hemispheres 28.5
2299 Female, age 85, both hemispheres 23.1
Nucleus raphe magnus
nTPM: 28.8
2172 Female, age 85, both hemispheres 33.2
2328 Male, age 80, both hemispheres 31.5
2459 Female, age 91, both hemispheres 29.3
2051 Male, age 76, both hemispheres 29.1
2455 Male, age 74, both hemispheres 27.5
2160 Male, age 61, both hemispheres 22.3
Nucleus raphe obscurus
nTPM: 22.7
2800 Male, age 61, midline 25.5
2845 Female, age 85, midline 21.6
2142 Male, age 76, midline 21.0
Nucleus raphe pallidus
nTPM: 23.9
2183 Male, age 80, midline 30.6
2145 Male, age 76, midline 20.8
1924 Male, age 61, midline 20.4
Nucleus tractus solitarii
nTPM: 30.7
2307 Male, age 80, both hemispheres 39.1
2656 Male, age 76, both hemispheres 34.9
2191 Female, age 85, both hemispheres 30.8
2144 Female, age 91, right hemisphere 17.8
Paramedian reticular nucleus
nTPM: 28.2
2050 Female, age 85, both hemispheres 30.9
2313 Male, age 61, both hemispheres 29.8
2057 Male, age 80, both hemispheres 27.8
2052 Male, age 76, both hemispheres 24.1
Parvicellular reticular nuclei
nTPM: 30.7
2558 Male, age 74, both hemispheres 34.0
2095 Male, age 76, both hemispheres 29.2
2119 Male, age 80, both hemispheres 28.9
Parvicellular reticular nuclei, medullary
nTPM: 28.3
2189 Female, age 91, both hemispheres 28.6
2091 Female, age 85, both hemispheres 28.5
2181 Male, age 80, left hemisphere 27.7
Pedunculopontine tegmental nucleus
nTPM: 30.4
2334 Male, age 80, both hemispheres 31.8
2338 Male, age 61, both hemispheres 30.4
1921 Female, age 85, both hemispheres 29.0
Peritrigeminal nucleus
nTPM: 24.0
2067 Female, age 85, both hemispheres 24.5
2136 Male, age 76, both hemispheres 24.1
2179 Male, age 61, both hemispheres 23.3
Pontine nuclei
nTPM: 28.7
2787 Female, age 85, both hemispheres 35.7
1968 Male, age 76, left hemisphere 32.4
1863 Male, age 55, unknown 31.2
2115 Male, age 80, left hemisphere 28.9
2109 Female, age 72, unknown 27.8
2319 Female, age 91, both hemispheres 26.4
2454 Male, age 74, left hemisphere 25.9
2727 Male, age 61, right hemisphere 21.3
Pontine raphe nucleus
nTPM: 31.4
2853 Male, age 76, midline 33.5
2122 Female, age 85, midline 29.4
Posteroventral cochlear nucleus
nTPM: 26.7
2371 Male, age 61, both hemispheres 33.6
2752 Female, age 85, both hemispheres 27.8
2341 Male, age 80, both hemispheres 24.9
2070 Male, age 76, both hemispheres 24.2
2135 Female, age 91, both hemispheres 22.9
Prepositus hypoglossal nucleus
nTPM: 26.3
2086 Male, age 80, both hemispheres 28.5
2855 Female, age 85, right hemisphere 24.1
Principal sensory trigeminal nucleus
nTPM: 28.2
2008 Male, age 80, left hemisphere 30.5
2324 Male, age 76, both hemispheres 28.0
2367 Female, age 91, left hemisphere 27.9
2158 Male, age 61, both hemispheres 26.4
Reticular pontine nucleus, caudal
nTPM: 29.0
2332 Male, age 80, right hemisphere 32.7
2457 Female, age 91, both hemispheres 29.6
2559 Male, age 74, both hemispheres 27.6
2092 Male, age 76, both hemispheres 26.1
Reticular pontine nucleus, oral
nTPM: 26.7
2167 Male, age 76, both hemispheres 29.2
2012 Female, age 85, both hemispheres 27.8
2366 Female, age 91, both hemispheres 27.8
1939 Male, age 80, both hemispheres 27.6
2361 Male, age 74, both hemispheres 21.3
Reticulotegmental nucleus
nTPM: 29.3
2333 Male, age 80, both hemispheres 32.8
2325 Male, age 76, both hemispheres 29.2
2452 Male, age 74, both hemispheres 28.9
2322 Female, age 91, both hemispheres 26.1
Spinal trigeminal nucleus, caudal
nTPM: 29.5
2642 Male, age 74, both hemispheres 31.4
2308 Male, age 80, both hemispheres 30.0
2390 Female, age 91, both hemispheres 29.5
2447 Male, age 76, both hemispheres 29.1
2312 Male, age 61, both hemispheres 27.4
Spinal trigeminal nucleus, interpolar
nTPM: 29.1
2389 Female, age 91, both hemispheres 31.0
2033 Male, age 80, both hemispheres 30.8
2625 Male, age 61, both hemispheres 29.6
2066 Male, age 76, right hemisphere 28.5
2386 Female, age 85, both hemispheres 25.4
Spinal trigeminal nucleus, oral
nTPM: 29.0
2164 Male, age 80, both hemispheres 29.3
2737 Female, age 85, both hemispheres 29.1
1978 Male, age 76, both hemispheres 28.6
Spinal vestibular nucleus
nTPM: 27.9
2796 Male, age 61, both hemispheres 32.4
2780 Male, age 80, both hemispheres 30.6
2384 Male, age 74, both hemispheres 27.3
2186 Female, age 91, both hemispheres 25.7
2748 Male, age 76, both hemispheres 25.7
2806 Female, age 85, both hemispheres 25.6
Subcoeruleus area
nTPM: 29.9
2323 Female, age 91, left hemisphere 32.7
2451 Male, age 74, both hemispheres 31.3
2089 Male, age 76, left hemisphere 30.7
1958 Male, age 80, both hemispheres 29.3
2369 Female, age 85, left hemisphere 25.7
Superior olive
nTPM: 27.7
2561 Female, age 91, both hemispheres 29.8
1875 Female, age 85, both hemispheres 29.6
2329 Male, age 80, right hemisphere 28.5
2020 Male, age 76, both hemispheres 26.8
2364 Male, age 74, right hemisphere 23.7
Superior vestibular nucleus
nTPM: 25.2
2061 Male, age 76, both hemispheres 29.7
2015 Male, age 80, both hemispheres 25.8
2383 Male, age 74, both hemispheres 20.0
Ventral medullary reticular nucleus
nTPM: 27.5
2060 Male, age 76, both hemispheres 29.5
2372 Male, age 61, both hemispheres 25.4
Ventral periolivary nuclei
nTPM: 28.0
2130 Female, age 85, both hemispheres 31.2
2794 Female, age 91, left hemisphere 29.8
2165 Male, age 80, both hemispheres 28.9
2023 Male, age 76, both hemispheres 22.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 26.7
2118 Male, age 80, both hemispheres 29.3
1986 Male, age 76, both hemispheres 26.5
2302 Female, age 91, both hemispheres 26.3
2741 Female, age 85, both hemispheres 25.8
2180 Male, age 61, both hemispheres 25.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 28.8
2359 Male, age 61, both hemispheres 32.1
2161 Male, age 80, both hemispheres 29.7
2456 Female, age 91, both hemispheres 29.3
2449 Male, age 74, both hemispheres 29.1
2840 Female, age 85, both hemispheres 26.9
1959 Male, age 76, both hemispheres 25.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 10.7
FF:10165-103B3 76 years, female 13.5
FF:10182-103D2 60 years, female 7.8
Medulla oblongata
Scaled Tags Per Million: 9.2
FF:10155-103A2 76 years, female 10.9
FF:10174-103C3 60 years, female 8.6
FF:10038-101F2 18-64 years, mixed 8.2
Pons
Scaled Tags Per Million: 8.5
FF:10033-101E6 18-54 years, mixed 8.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 10.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 9.5
Samples: 4

Max nTPM: 10.1
Min nTPM: 8.5
Sample A Female 9.4
Sample B Female 9.9
Sample C Male 10.1
Sample D Male 8.5
Pons
nTPM: 10.6
Samples: 4

Max nTPM: 11.3
Min nTPM: 9.7
Sample A Female 11.3
Sample B Female 9.7
Sample C Male 10.3
Sample D Male 11.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 10.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 10.6
Samples: 4

Max nTPM: 12.1
Min nTPM: 8.1
Sample A Male 10.5
Sample B Male 8.1
Sample C Female 12.1
Sample D Female 11.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.0
71492892 Antisense, RP_050913_01_G03, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 0.0
71492892 Antisense, RP_050913_01_G03, Mouse strain C57BL/6J (56 days, male) 0.0

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