PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:223.7 nTPM
FANTOM5:280.4 Scaled Tags Per Million
Pig:166.9 nTPM
Mouse:223.3 nTPM
Allen mouse:4.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 223.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 161.6
2301 Female, age 85, both hemispheres 168.2
1984 Male, age 76, both hemispheres 164.5
2090 Male, age 80, both hemispheres 160.1
2188 Female, age 91, both hemispheres 153.5
Area postrema
nTPM: 221.2
2799 Male, age 61, both hemispheres 303.2
2306 Male, age 80, both hemispheres 185.7
2054 Male, age 76, both hemispheres 174.7
Dorsal cochlear nucleus
nTPM: 179.4
2802 Male, age 74, right hemisphere 203.2
2187 Female, age 91, both hemispheres 179.8
2378 Male, age 80, both hemispheres 178.6
2370 Male, age 61, both hemispheres 168.0
2058 Male, age 76, both hemispheres 167.5
Dorsal medullary reticular nucleus
nTPM: 154.9
2040 Female, age 85, both hemispheres 168.8
2088 Male, age 76, both hemispheres 149.7
2373 Male, age 61, both hemispheres 146.3
Dorsal motor vagal complex
nTPM: 185.0
2643 Male, age 74, both hemispheres 215.0
2844 Male, age 55, unknown 205.2
2813 Female, age 72, unknown 199.2
2185 Male, age 76, both hemispheres 185.3
2797 Male, age 61, both hemispheres 180.1
2000 Male, age 74, unknown 179.2
2133 Female, age 91, both hemispheres 175.9
2807 Female, age 85, both hemispheres 140.4
Dorsal tegmental nucleus
nTPM: 182.4
2358 Male, age 61, both hemispheres 228.1
2326 Male, age 74, both hemispheres 190.9
2083 Male, age 80, both hemispheres 166.8
1936 Male, age 76, left hemisphere 143.6
Dorsolateral tegmental area
nTPM: 185.5
2360 Male, age 74, both hemispheres 237.9
2337 Male, age 61, both hemispheres 198.2
2654 Male, age 80, both hemispheres 174.1
2141 Male, age 76, both hemispheres 160.1
2751 Female, age 85, both hemispheres 157.3
Gigantocellular reticular nuclei, medullary
nTPM: 165.4
2387 Female, age 91, both hemispheres 183.1
2462 Male, age 74, both hemispheres 169.4
1876 Female, age 85, both hemispheres 168.5
2314 Male, age 61, both hemispheres 166.5
2022 Male, age 76, right hemisphere 164.9
2310 Male, age 80, both hemispheres 139.9
Gigantocellular reticular nuclei, pars
nTPM: 132.1
2084 Female, age 85, both hemispheres 147.2
2336 Male, age 61, both hemispheres 141.3
2330 Male, age 80, both hemispheres 125.5
2706 Male, age 80, both hemispheres 125.0
2168 Male, age 76, both hemispheres 121.4
Inferior olive
nTPM: 194.4
2563 Male, age 74, both hemispheres 229.1
2085 Female, age 85, both hemispheres 201.4
2379 Male, age 80, both hemispheres 192.4
2178 Male, age 61, both hemispheres 185.3
2628 Female, age 91, both hemispheres 163.6
Kolliker-Fuse nucleus
nTPM: 172.5
2315 Male, age 76, right hemisphere 207.8
2163 Male, age 80, both hemispheres 159.8
2793 Female, age 91, left hemisphere 149.9
Lateral lemniscal nuclei
nTPM: 130.6
2320 Female, age 91, left hemisphere 139.7
2453 Male, age 74, right hemisphere 134.2
2746 Female, age 85, left hemisphere 130.6
2036 Male, age 80, both hemispheres 126.1
2169 Male, age 76, both hemispheres 122.6
Lateral medullary reticular nucleus
nTPM: 184.9
2305 Male, age 74, both hemispheres 216.7
2190 Female, age 85, both hemispheres 193.4
2804 Female, age 91, both hemispheres 192.2
2852 Male, age 80, both hemispheres 187.1
2374 Male, age 61, both hemispheres 176.6
2044 Male, age 76, both hemispheres 143.5
Lateral parabrachial nucleus
nTPM: 156.4
2013 Male, age 80, both hemispheres 164.7
2792 Male, age 76, both hemispheres 163.8
2139 Female, age 85, right hemisphere 161.5
2790 Male, age 61, both hemispheres 135.5
Lateral vestibular nucleus
nTPM: 153.0
2311 Male, age 80, both hemispheres 175.1
2184 Male, age 76, both hemispheres 130.8
Locus coeruleus
nTPM: 165.9
2123 Female, age 91, both hemispheres 197.4
2014 Male, age 55, unknown 176.9
1980 Male, age 76, both hemispheres 168.8
2317 Female, age 72, unknown 162.9
2720 Male, age 74, both hemispheres 156.2
2162 Male, age 80, both hemispheres 154.1
2788 Male, age 74, unknown 145.0
Medial olivary nucleus
nTPM: 197.7
1943 Male, age 61, both hemispheres 211.9
2138 Female, age 91, both hemispheres 210.2
1962 Male, age 76, both hemispheres 199.8
2851 Male, age 80, both hemispheres 168.9
Medial parabrachial nucleus
nTPM: 163.8
2463 Female, age 85, right hemisphere 201.1
2170 Female, age 91, both hemispheres 185.7
2156 Male, age 61, both hemispheres 153.7
2786 Male, age 76, both hemispheres 140.0
2854 Male, age 80, both hemispheres 138.3
Medial periolivary nuclei
nTPM: 140.9
2791 Male, age 74, right hemisphere 168.0
2063 Male, age 76, both hemispheres 145.0
2171 Female, age 85, both hemispheres 136.9
2081 Male, age 80, both hemispheres 131.4
2458 Female, age 91, both hemispheres 123.0
Medial vestibular nucleus
nTPM: 166.3
2743 Female, age 85, both hemispheres 192.0
2801 Male, age 74, both hemispheres 182.6
2624 Male, age 61, both hemispheres 161.8
2803 Female, age 91, both hemispheres 158.8
2093 Male, age 80, both hemispheres 152.5
2134 Male, age 76, both hemispheres 149.9
Motor facial nucleus
nTPM: 146.2
2795 Female, age 91, both hemispheres 170.0
2365 Male, age 74, right hemisphere 165.0
2126 Male, age 61, both hemispheres 152.3
2062 Male, age 76, both hemispheres 146.0
2697 Female, age 85, both hemispheres 133.6
2327 Male, age 80, both hemispheres 110.5
Motor hypoglossal nucleus
nTPM: 174.6
2277 Male, age 76, both hemispheres 188.5
2125 Female, age 91, both hemispheres 179.5
2182 Male, age 80, both hemispheres 171.5
2461 Male, age 61, both hemispheres 167.9
2132 Female, age 85, both hemispheres 165.3
Motor trigeminal nucleus
nTPM: 132.7
2560 Male, age 74, both hemispheres 148.5
2335 Male, age 61, both hemispheres 148.3
2309 Male, age 76, both hemispheres 134.0
2321 Female, age 91, both hemispheres 127.1
2079 Male, age 80, both hemispheres 105.6
Nuclei of the trapezoid body
nTPM: 133.8
2368 Female, age 91, both hemispheres 150.6
1983 Male, age 76, both hemispheres 141.6
2166 Male, age 80, both hemispheres 126.9
2159 Male, age 61, both hemispheres 125.0
2735 Female, age 85, both hemispheres 125.0
Nucleus ambiguus
nTPM: 164.9
2071 Male, age 76, both hemispheres 203.4
2096 Female, age 85, both hemispheres 126.4
Nucleus cuneatus
nTPM: 166.5
2564 Male, age 74, both hemispheres 207.4
2380 Male, age 80, both hemispheres 185.0
2808 Female, age 85, both hemispheres 177.0
2381 Male, age 80, both hemispheres 170.5
2562 Male, age 61, both hemispheres 169.4
2805 Female, age 91, both hemispheres 163.5
2376 Male, age 61, both hemispheres 145.5
2131 Male, age 76, both hemispheres 141.5
2100 Male, age 76, both hemispheres 138.4
Nucleus gracilis
nTPM: 204.1
2299 Female, age 85, both hemispheres 226.2
2627 Male, age 74, both hemispheres 217.5
2382 Male, age 80, both hemispheres 168.5
Nucleus raphe magnus
nTPM: 132.5
2455 Male, age 74, both hemispheres 152.9
2051 Male, age 76, both hemispheres 139.9
2459 Female, age 91, both hemispheres 135.3
2328 Male, age 80, both hemispheres 128.7
2160 Male, age 61, both hemispheres 120.1
2172 Female, age 85, both hemispheres 117.8
Nucleus raphe obscurus
nTPM: 172.9
2142 Male, age 76, midline 182.7
2845 Female, age 85, midline 179.5
2800 Male, age 61, midline 156.4
Nucleus raphe pallidus
nTPM: 223.7
1924 Male, age 61, midline 305.6
2145 Male, age 76, midline 187.8
2183 Male, age 80, midline 177.7
Nucleus tractus solitarii
nTPM: 174.3
2144 Female, age 91, right hemisphere 200.1
2656 Male, age 76, both hemispheres 181.1
2191 Female, age 85, both hemispheres 177.6
2307 Male, age 80, both hemispheres 138.2
Paramedian reticular nucleus
nTPM: 152.2
2057 Male, age 80, both hemispheres 165.8
2313 Male, age 61, both hemispheres 162.0
2050 Female, age 85, both hemispheres 146.7
2052 Male, age 76, both hemispheres 134.2
Parvicellular reticular nuclei
nTPM: 138.6
2119 Male, age 80, both hemispheres 162.3
2095 Male, age 76, both hemispheres 135.6
2558 Male, age 74, both hemispheres 117.9
Parvicellular reticular nuclei, medullary
nTPM: 167.8
2189 Female, age 91, both hemispheres 173.5
2181 Male, age 80, left hemisphere 166.3
2091 Female, age 85, both hemispheres 163.5
Pedunculopontine tegmental nucleus
nTPM: 180.6
1921 Female, age 85, both hemispheres 187.7
2334 Male, age 80, both hemispheres 177.6
2338 Male, age 61, both hemispheres 176.5
Peritrigeminal nucleus
nTPM: 181.8
2067 Female, age 85, both hemispheres 213.1
2179 Male, age 61, both hemispheres 174.3
2136 Male, age 76, both hemispheres 158.0
Pontine nuclei
nTPM: 140.4
2454 Male, age 74, left hemisphere 157.7
2319 Female, age 91, both hemispheres 151.0
1863 Male, age 55, unknown 146.5
2109 Female, age 72, unknown 142.6
1968 Male, age 76, left hemisphere 140.5
2787 Female, age 85, both hemispheres 138.0
2727 Male, age 61, right hemisphere 124.6
2115 Male, age 80, left hemisphere 122.4
Pontine raphe nucleus
nTPM: 138.2
2853 Male, age 76, midline 148.2
2122 Female, age 85, midline 128.2
Posteroventral cochlear nucleus
nTPM: 160.9
2070 Male, age 76, both hemispheres 175.4
2371 Male, age 61, both hemispheres 166.5
2752 Female, age 85, both hemispheres 164.1
2135 Female, age 91, both hemispheres 151.2
2341 Male, age 80, both hemispheres 147.3
Prepositus hypoglossal nucleus
nTPM: 174.2
2086 Male, age 80, both hemispheres 177.4
2855 Female, age 85, right hemisphere 170.9
Principal sensory trigeminal nucleus
nTPM: 125.3
2324 Male, age 76, both hemispheres 142.4
2367 Female, age 91, left hemisphere 138.1
2158 Male, age 61, both hemispheres 114.1
2008 Male, age 80, left hemisphere 106.5
Reticular pontine nucleus, caudal
nTPM: 126.4
2559 Male, age 74, both hemispheres 146.5
2092 Male, age 76, both hemispheres 139.8
2457 Female, age 91, both hemispheres 119.3
2332 Male, age 80, right hemisphere 100.2
Reticular pontine nucleus, oral
nTPM: 152.2
1939 Male, age 80, both hemispheres 170.2
2167 Male, age 76, both hemispheres 157.6
2366 Female, age 91, both hemispheres 153.6
2012 Female, age 85, both hemispheres 143.0
2361 Male, age 74, both hemispheres 136.8
Reticulotegmental nucleus
nTPM: 148.0
2322 Female, age 91, both hemispheres 167.9
2452 Male, age 74, both hemispheres 165.5
2333 Male, age 80, both hemispheres 141.9
2325 Male, age 76, both hemispheres 116.7
Spinal trigeminal nucleus, caudal
nTPM: 161.7
2312 Male, age 61, both hemispheres 173.0
2642 Male, age 74, both hemispheres 165.1
2308 Male, age 80, both hemispheres 164.9
2390 Female, age 91, both hemispheres 155.8
2447 Male, age 76, both hemispheres 149.7
Spinal trigeminal nucleus, interpolar
nTPM: 150.7
2386 Female, age 85, both hemispheres 161.8
2033 Male, age 80, both hemispheres 161.3
2625 Male, age 61, both hemispheres 148.2
2066 Male, age 76, right hemisphere 142.6
2389 Female, age 91, both hemispheres 139.7
Spinal trigeminal nucleus, oral
nTPM: 154.5
2737 Female, age 85, both hemispheres 163.8
1978 Male, age 76, both hemispheres 156.6
2164 Male, age 80, both hemispheres 143.2
Spinal vestibular nucleus
nTPM: 157.4
2384 Male, age 74, both hemispheres 169.0
2748 Male, age 76, both hemispheres 165.3
2186 Female, age 91, both hemispheres 156.3
2780 Male, age 80, both hemispheres 156.1
2806 Female, age 85, both hemispheres 155.2
2796 Male, age 61, both hemispheres 142.4
Subcoeruleus area
nTPM: 153.4
2451 Male, age 74, both hemispheres 174.8
2323 Female, age 91, left hemisphere 163.1
2369 Female, age 85, left hemisphere 159.5
1958 Male, age 80, both hemispheres 153.9
2089 Male, age 76, left hemisphere 115.6
Superior olive
nTPM: 138.8
2364 Male, age 74, right hemisphere 175.4
2020 Male, age 76, both hemispheres 140.3
2561 Female, age 91, both hemispheres 126.8
2329 Male, age 80, right hemisphere 126.1
1875 Female, age 85, both hemispheres 125.1
Superior vestibular nucleus
nTPM: 206.9
2383 Male, age 74, both hemispheres 264.1
2015 Male, age 80, both hemispheres 193.4
2061 Male, age 76, both hemispheres 163.3
Ventral medullary reticular nucleus
nTPM: 166.7
2372 Male, age 61, both hemispheres 175.4
2060 Male, age 76, both hemispheres 158.1
Ventral periolivary nuclei
nTPM: 136.7
2130 Female, age 85, both hemispheres 155.3
2023 Male, age 76, both hemispheres 153.9
2165 Male, age 80, both hemispheres 120.0
2794 Female, age 91, left hemisphere 117.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 168.6
2302 Female, age 91, both hemispheres 179.7
2741 Female, age 85, both hemispheres 177.5
2118 Male, age 80, both hemispheres 171.7
2180 Male, age 61, both hemispheres 165.2
1986 Male, age 76, both hemispheres 148.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 152.6
2359 Male, age 61, both hemispheres 178.7
2456 Female, age 91, both hemispheres 160.2
2840 Female, age 85, both hemispheres 152.1
2449 Male, age 74, both hemispheres 143.2
1959 Male, age 76, both hemispheres 141.8
2161 Male, age 80, both hemispheres 139.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 280.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 250.4
FF:10182-103D2 60 years, female 275.1
FF:10165-103B3 76 years, female 225.8
Medulla oblongata
Scaled Tags Per Million: 280.4
FF:10038-101F2 18-64 years, mixed 301.7
FF:10174-103C3 60 years, female 296.0
FF:10155-103A2 76 years, female 243.6
Pons
Scaled Tags Per Million: 217.7
FF:10033-101E6 18-54 years, mixed 217.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 166.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 145.7
Samples: 4

Max nTPM: 161.9
Min nTPM: 129.2
Sample A Female 147.9
Sample B Female 129.2
Sample C Male 143.9
Sample D Male 161.9
Pons
nTPM: 166.9
Samples: 4

Max nTPM: 252.5
Min nTPM: 123.6
Sample A Female 252.5
Sample B Female 123.6
Sample C Male 155.0
Sample D Male 136.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 223.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 223.3
Samples: 4

Max nTPM: 229.0
Min nTPM: 218.3
Sample A Male 227.1
Sample B Male 218.6
Sample C Female 218.3
Sample D Female 229.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.8
79591729 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 9.6
79904258 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 5.2
197 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 4.9
196 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 2.5
195 Sense, RPS_Baylor_36960, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 4.8
79591729 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 9.8
197 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 4.6
79904258 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 4.6
196 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 3.9
195 Sense, RPS_Baylor_36960, Mouse strain C57BL/6J (56 days, male) 0.0

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