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CPLX1
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  • CPLX1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:187.2 nTPM
FANTOM5:99.5 Scaled Tags Per Million
Pig:100.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA071191Antibody HPA074390
Glial cells LowLow
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

187.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 187.2
Samples: 246

Max nTPM: 487.1
Min nTPM: 27.2
Std nTPM: 84.3
Median nTPM: 194.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 487.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 425.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 395.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 387.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 370.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 360.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 357.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 356.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 350.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 347.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 343.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 340.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 331.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 329.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 316.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 316.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 302.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 297.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 297.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 295.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 293.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 290.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 289.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 288.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 287.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 286.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 285.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 283.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 283.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 282.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 282.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 280.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 279.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 278.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 277.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 273.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 272.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 271.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 270.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 270.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 270.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 269.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 269.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 264.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 263.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 262.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 261.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 261.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 256.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 255.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 253.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 253.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 250.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 250.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 246.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 242.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 242.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 242.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 241.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 241.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 241.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 241.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 240.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 239.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 239.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 237.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 236.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 235.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 234.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 233.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 233.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 233.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 233.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 231.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 230.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 229.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 229.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 228.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 227.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 226.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 226.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 226.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 225.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 225.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 225.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 223.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 222.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 221.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 219.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 219.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 218.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 217.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 216.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 216.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 215.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 214.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 214.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 213.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 213.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 212.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 211.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 210.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 209.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 209.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 209.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 208.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 208.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 207.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 207.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 205.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 205.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 204.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 204.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 203.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 203.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 201.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 201.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 201.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 200.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 199.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 195.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 195.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 194.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 193.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 193.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 193.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 192.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 192.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 189.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 189.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 187.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 187.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 186.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 186.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 186.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 185.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 183.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 182.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 179.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 177.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 173.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 173.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 172.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 172.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 170.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 164.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 164.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 163.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 162.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 159.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 157.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 157.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 156.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 155.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 155.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 154.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 153.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 151.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 149.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 147.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 147.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 146.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 144.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 142.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 141.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 140.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 140.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 138.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 138.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 134.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 134.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 134.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 133.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 131.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 129.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 125.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 122.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 122.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 121.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 121.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 118.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 118.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 117.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 112.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 112.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 111.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 111.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 110.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 108.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 107.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 106.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 106.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 105.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 105.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 100.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 100.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 100.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 96.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 95.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 95.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 95.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 94.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 94.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 94.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 92.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 91.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 91.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 90.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 89.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 88.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 88.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 88.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 85.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 85.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 83.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 83.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 82.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 82.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 80.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 80.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 78.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 78.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 76.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 75.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 75.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 68.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 67.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 66.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 64.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 60.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 59.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 59.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 51.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 50.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 49.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 46.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 37.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 37.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 35.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 34.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 27.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 27.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

99.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 99.5
FF:10164-103B2 76 years, female 99.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.8
Pig sample Sample description nTPM
Caudate
nTPM: 100.8
Samples: 4

Max nTPM: 121.1
Min nTPM: 71.7
Sample A Female 71.7
Sample B Female 108.0
Sample C Male 121.1
Sample D Male 102.3

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