PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:429.5 nTPM
FANTOM5:227.3 Scaled Tags Per Million
Pig:132.6 nTPM
Mouse:36.5 nTPM
Allen mouse:6.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 429.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 302.0
1984 Male, age 76, both hemispheres 350.8
2301 Female, age 85, both hemispheres 328.7
2188 Female, age 91, both hemispheres 290.6
2090 Male, age 80, both hemispheres 237.9
Area postrema
nTPM: 218.9
2306 Male, age 80, both hemispheres 280.9
2054 Male, age 76, both hemispheres 214.7
2799 Male, age 61, both hemispheres 161.2
Dorsal cochlear nucleus
nTPM: 225.1
2187 Female, age 91, both hemispheres 269.0
2802 Male, age 74, right hemisphere 252.8
2058 Male, age 76, both hemispheres 218.6
2370 Male, age 61, both hemispheres 195.9
2378 Male, age 80, both hemispheres 189.1
Dorsal medullary reticular nucleus
nTPM: 284.2
2088 Male, age 76, both hemispheres 294.3
2373 Male, age 61, both hemispheres 279.9
2040 Female, age 85, both hemispheres 278.4
Dorsal motor vagal complex
nTPM: 270.1
2643 Male, age 74, both hemispheres 326.6
2844 Male, age 55, unknown 322.9
2797 Male, age 61, both hemispheres 318.1
2000 Male, age 74, unknown 269.7
2185 Male, age 76, both hemispheres 265.8
2807 Female, age 85, both hemispheres 246.5
2133 Female, age 91, both hemispheres 235.7
2813 Female, age 72, unknown 175.1
Dorsal tegmental nucleus
nTPM: 237.9
2326 Male, age 74, both hemispheres 300.2
1936 Male, age 76, left hemisphere 281.5
2083 Male, age 80, both hemispheres 241.9
2358 Male, age 61, both hemispheres 128.0
Dorsolateral tegmental area
nTPM: 225.8
2751 Female, age 85, both hemispheres 266.0
2360 Male, age 74, both hemispheres 262.3
2654 Male, age 80, both hemispheres 230.5
2141 Male, age 76, both hemispheres 220.0
2337 Male, age 61, both hemispheres 149.9
Gigantocellular reticular nuclei, medullary
nTPM: 298.7
2462 Male, age 74, both hemispheres 382.1
2310 Male, age 80, both hemispheres 356.6
2022 Male, age 76, right hemisphere 317.0
2387 Female, age 91, both hemispheres 283.7
2314 Male, age 61, both hemispheres 239.7
1876 Female, age 85, both hemispheres 213.1
Gigantocellular reticular nuclei, pars
nTPM: 297.3
2330 Male, age 80, both hemispheres 354.6
2706 Male, age 80, both hemispheres 352.3
2168 Male, age 76, both hemispheres 328.6
2084 Female, age 85, both hemispheres 240.3
2336 Male, age 61, both hemispheres 210.8
Inferior olive
nTPM: 237.8
2563 Male, age 74, both hemispheres 248.6
2178 Male, age 61, both hemispheres 241.1
2628 Female, age 91, both hemispheres 238.7
2085 Female, age 85, both hemispheres 237.4
2379 Male, age 80, both hemispheres 223.5
Kolliker-Fuse nucleus
nTPM: 243.8
2793 Female, age 91, left hemisphere 326.4
2163 Male, age 80, both hemispheres 246.9
2315 Male, age 76, right hemisphere 158.2
Lateral lemniscal nuclei
nTPM: 347.1
2320 Female, age 91, left hemisphere 429.0
2453 Male, age 74, right hemisphere 343.6
2036 Male, age 80, both hemispheres 340.1
2746 Female, age 85, left hemisphere 336.0
2169 Male, age 76, both hemispheres 286.7
Lateral medullary reticular nucleus
nTPM: 230.2
2852 Male, age 80, both hemispheres 277.7
2190 Female, age 85, both hemispheres 257.4
2044 Male, age 76, both hemispheres 244.6
2305 Male, age 74, both hemispheres 234.2
2804 Female, age 91, both hemispheres 207.1
2374 Male, age 61, both hemispheres 160.2
Lateral parabrachial nucleus
nTPM: 278.6
2790 Male, age 61, both hemispheres 319.7
2139 Female, age 85, right hemisphere 293.2
2013 Male, age 80, both hemispheres 263.4
2792 Male, age 76, both hemispheres 238.3
Lateral vestibular nucleus
nTPM: 291.8
2184 Male, age 76, both hemispheres 341.9
2311 Male, age 80, both hemispheres 241.7
Locus coeruleus
nTPM: 301.1
2014 Male, age 55, unknown 378.2
2317 Female, age 72, unknown 359.8
1980 Male, age 76, both hemispheres 346.1
2123 Female, age 91, both hemispheres 308.7
2162 Male, age 80, both hemispheres 298.4
2720 Male, age 74, both hemispheres 231.8
2788 Male, age 74, unknown 184.8
Medial olivary nucleus
nTPM: 179.9
2851 Male, age 80, both hemispheres 203.5
1962 Male, age 76, both hemispheres 187.4
2138 Female, age 91, both hemispheres 181.0
1943 Male, age 61, both hemispheres 147.9
Medial parabrachial nucleus
nTPM: 287.0
2463 Female, age 85, right hemisphere 359.6
2786 Male, age 76, both hemispheres 310.9
2156 Male, age 61, both hemispheres 310.1
2170 Female, age 91, both hemispheres 265.5
2854 Male, age 80, both hemispheres 188.6
Medial periolivary nuclei
nTPM: 300.4
2791 Male, age 74, right hemisphere 358.5
2458 Female, age 91, both hemispheres 321.7
2171 Female, age 85, both hemispheres 290.9
2081 Male, age 80, both hemispheres 273.4
2063 Male, age 76, both hemispheres 257.6
Medial vestibular nucleus
nTPM: 230.2
2801 Male, age 74, both hemispheres 264.0
2743 Female, age 85, both hemispheres 259.9
2624 Male, age 61, both hemispheres 239.7
2093 Male, age 80, both hemispheres 218.0
2134 Male, age 76, both hemispheres 211.8
2803 Female, age 91, both hemispheres 188.1
Motor facial nucleus
nTPM: 317.9
2327 Male, age 80, both hemispheres 436.4
2795 Female, age 91, both hemispheres 336.7
2365 Male, age 74, right hemisphere 308.3
2126 Male, age 61, both hemispheres 308.2
2062 Male, age 76, both hemispheres 281.6
2697 Female, age 85, both hemispheres 236.3
Motor hypoglossal nucleus
nTPM: 251.7
2182 Male, age 80, both hemispheres 318.0
2125 Female, age 91, both hemispheres 273.1
2277 Male, age 76, both hemispheres 251.2
2132 Female, age 85, both hemispheres 251.1
2461 Male, age 61, both hemispheres 165.3
Motor trigeminal nucleus
nTPM: 335.1
2560 Male, age 74, both hemispheres 423.2
2079 Male, age 80, both hemispheres 363.8
2321 Female, age 91, both hemispheres 334.4
2309 Male, age 76, both hemispheres 278.8
2335 Male, age 61, both hemispheres 275.4
Nuclei of the trapezoid body
nTPM: 367.2
2159 Male, age 61, both hemispheres 505.5
2368 Female, age 91, both hemispheres 394.6
2735 Female, age 85, both hemispheres 371.7
2166 Male, age 80, both hemispheres 325.3
1983 Male, age 76, both hemispheres 239.0
Nucleus ambiguus
nTPM: 387.1
2096 Female, age 85, both hemispheres 572.6
2071 Male, age 76, both hemispheres 201.6
Nucleus cuneatus
nTPM: 296.3
2564 Male, age 74, both hemispheres 378.9
2562 Male, age 61, both hemispheres 316.2
2376 Male, age 61, both hemispheres 310.4
2808 Female, age 85, both hemispheres 299.0
2131 Male, age 76, both hemispheres 293.5
2100 Male, age 76, both hemispheres 292.6
2805 Female, age 91, both hemispheres 266.5
2380 Male, age 80, both hemispheres 258.6
2381 Male, age 80, both hemispheres 251.2
Nucleus gracilis
nTPM: 268.1
2299 Female, age 85, both hemispheres 323.0
2627 Male, age 74, both hemispheres 266.9
2382 Male, age 80, both hemispheres 214.4
Nucleus raphe magnus
nTPM: 376.1
2160 Male, age 61, both hemispheres 653.4
2328 Male, age 80, both hemispheres 378.1
2172 Female, age 85, both hemispheres 339.8
2459 Female, age 91, both hemispheres 338.4
2455 Male, age 74, both hemispheres 323.6
2051 Male, age 76, both hemispheres 223.2
Nucleus raphe obscurus
nTPM: 290.6
2142 Male, age 76, midline 307.8
2845 Female, age 85, midline 303.4
2800 Male, age 61, midline 260.7
Nucleus raphe pallidus
nTPM: 236.9
2183 Male, age 80, midline 258.7
1924 Male, age 61, midline 236.7
2145 Male, age 76, midline 215.1
Nucleus tractus solitarii
nTPM: 222.3
2307 Male, age 80, both hemispheres 285.5
2656 Male, age 76, both hemispheres 259.2
2191 Female, age 85, both hemispheres 220.3
2144 Female, age 91, right hemisphere 124.2
Paramedian reticular nucleus
nTPM: 256.4
2057 Male, age 80, both hemispheres 306.5
2313 Male, age 61, both hemispheres 261.4
2050 Female, age 85, both hemispheres 237.4
2052 Male, age 76, both hemispheres 220.4
Parvicellular reticular nuclei
nTPM: 285.3
2558 Male, age 74, both hemispheres 387.3
2095 Male, age 76, both hemispheres 261.1
2119 Male, age 80, both hemispheres 207.3
Parvicellular reticular nuclei, medullary
nTPM: 253.1
2091 Female, age 85, both hemispheres 292.0
2189 Female, age 91, both hemispheres 235.5
2181 Male, age 80, left hemisphere 231.6
Pedunculopontine tegmental nucleus
nTPM: 243.6
1921 Female, age 85, both hemispheres 293.9
2334 Male, age 80, both hemispheres 256.8
2338 Male, age 61, both hemispheres 180.1
Peritrigeminal nucleus
nTPM: 275.0
2179 Male, age 61, both hemispheres 365.3
2067 Female, age 85, both hemispheres 259.2
2136 Male, age 76, both hemispheres 200.5
Pontine nuclei
nTPM: 340.7
2727 Male, age 61, right hemisphere 562.7
2787 Female, age 85, both hemispheres 371.5
1968 Male, age 76, left hemisphere 333.7
2109 Female, age 72, unknown 316.9
1863 Male, age 55, unknown 301.1
2319 Female, age 91, both hemispheres 292.3
2115 Male, age 80, left hemisphere 286.9
2454 Male, age 74, left hemisphere 260.1
Pontine raphe nucleus
nTPM: 276.0
2122 Female, age 85, midline 282.1
2853 Male, age 76, midline 270.0
Posteroventral cochlear nucleus
nTPM: 249.0
2070 Male, age 76, both hemispheres 301.0
2341 Male, age 80, both hemispheres 249.2
2371 Male, age 61, both hemispheres 236.2
2135 Female, age 91, both hemispheres 230.5
2752 Female, age 85, both hemispheres 228.4
Prepositus hypoglossal nucleus
nTPM: 269.9
2086 Male, age 80, both hemispheres 287.9
2855 Female, age 85, right hemisphere 251.9
Principal sensory trigeminal nucleus
nTPM: 429.5
2158 Male, age 61, both hemispheres 694.2
2008 Male, age 80, left hemisphere 436.4
2324 Male, age 76, both hemispheres 302.4
2367 Female, age 91, left hemisphere 285.0
Reticular pontine nucleus, caudal
nTPM: 357.0
2332 Male, age 80, right hemisphere 442.0
2457 Female, age 91, both hemispheres 387.0
2559 Male, age 74, both hemispheres 317.4
2092 Male, age 76, both hemispheres 281.6
Reticular pontine nucleus, oral
nTPM: 273.2
2361 Male, age 74, both hemispheres 348.3
2012 Female, age 85, both hemispheres 290.3
2366 Female, age 91, both hemispheres 289.6
2167 Male, age 76, both hemispheres 233.5
1939 Male, age 80, both hemispheres 204.0
Reticulotegmental nucleus
nTPM: 279.1
2333 Male, age 80, both hemispheres 289.7
2322 Female, age 91, both hemispheres 289.5
2452 Male, age 74, both hemispheres 282.6
2325 Male, age 76, both hemispheres 254.6
Spinal trigeminal nucleus, caudal
nTPM: 288.6
2642 Male, age 74, both hemispheres 339.8
2447 Male, age 76, both hemispheres 308.3
2390 Female, age 91, both hemispheres 280.6
2308 Male, age 80, both hemispheres 267.7
2312 Male, age 61, both hemispheres 246.7
Spinal trigeminal nucleus, interpolar
nTPM: 253.5
2389 Female, age 91, both hemispheres 316.5
2625 Male, age 61, both hemispheres 261.6
2386 Female, age 85, both hemispheres 242.2
2033 Male, age 80, both hemispheres 223.7
2066 Male, age 76, right hemisphere 223.2
Spinal trigeminal nucleus, oral
nTPM: 304.2
2737 Female, age 85, both hemispheres 369.9
2164 Male, age 80, both hemispheres 280.0
1978 Male, age 76, both hemispheres 262.5
Spinal vestibular nucleus
nTPM: 251.5
2384 Male, age 74, both hemispheres 308.2
2748 Male, age 76, both hemispheres 287.3
2186 Female, age 91, both hemispheres 251.8
2780 Male, age 80, both hemispheres 249.4
2796 Male, age 61, both hemispheres 218.5
2806 Female, age 85, both hemispheres 193.7
Subcoeruleus area
nTPM: 290.2
2089 Male, age 76, left hemisphere 364.1
2451 Male, age 74, both hemispheres 298.8
2369 Female, age 85, left hemisphere 269.7
1958 Male, age 80, both hemispheres 259.7
2323 Female, age 91, left hemisphere 258.5
Superior olive
nTPM: 314.9
2561 Female, age 91, both hemispheres 393.5
2329 Male, age 80, right hemisphere 355.7
1875 Female, age 85, both hemispheres 312.5
2020 Male, age 76, both hemispheres 269.5
2364 Male, age 74, right hemisphere 243.4
Superior vestibular nucleus
nTPM: 231.3
2061 Male, age 76, both hemispheres 303.3
2015 Male, age 80, both hemispheres 225.1
2383 Male, age 74, both hemispheres 165.5
Ventral medullary reticular nucleus
nTPM: 284.1
2060 Male, age 76, both hemispheres 332.2
2372 Male, age 61, both hemispheres 236.0
Ventral periolivary nuclei
nTPM: 333.1
2165 Male, age 80, both hemispheres 384.3
2794 Female, age 91, left hemisphere 348.5
2130 Female, age 85, both hemispheres 346.1
2023 Male, age 76, both hemispheres 253.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 248.8
2302 Female, age 91, both hemispheres 261.3
2741 Female, age 85, both hemispheres 259.8
2118 Male, age 80, both hemispheres 253.5
2180 Male, age 61, both hemispheres 241.4
1986 Male, age 76, both hemispheres 227.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 274.4
2456 Female, age 91, both hemispheres 392.6
2449 Male, age 74, both hemispheres 331.2
2161 Male, age 80, both hemispheres 290.1
1959 Male, age 76, both hemispheres 241.2
2840 Female, age 85, both hemispheres 201.6
2359 Male, age 61, both hemispheres 189.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 227.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 112.7
FF:10182-103D2 60 years, female 126.2
FF:10165-103B3 76 years, female 99.1
Medulla oblongata
Scaled Tags Per Million: 104.4
FF:10038-101F2 18-64 years, mixed 163.1
FF:10155-103A2 76 years, female 88.2
FF:10174-103C3 60 years, female 61.7
Pons
Scaled Tags Per Million: 227.3
FF:10033-101E6 18-54 years, mixed 227.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 132.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 132.6
Samples: 4

Max nTPM: 148.8
Min nTPM: 109.1
Sample A Female 135.4
Sample B Female 109.1
Sample C Male 148.8
Sample D Male 137.1
Pons
nTPM: 115.4
Samples: 4

Max nTPM: 131.0
Min nTPM: 102.8
Sample A Female 131.0
Sample B Female 113.7
Sample C Male 114.0
Sample D Male 102.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 36.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 36.5
Samples: 4

Max nTPM: 43.6
Min nTPM: 33.1
Sample A Male 43.6
Sample B Male 35.1
Sample C Female 33.1
Sample D Female 34.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.8
68845341 Antisense, RP_050224_01_F03, Mouse strain C57BL/6J (56 days, male) 7.1
74425543 Antisense, RP_051214_02_G05, Mouse strain C57BL/6J (56 days, male) 7.0
100144507 Antisense, RP_110421_03_E12, Mouse strain C57BL/6J (56 days, male) 6.3
Pons
Expression energy: 6.6
74425543 Antisense, RP_051214_02_G05, Mouse strain C57BL/6J (56 days, male) 8.6
68845341 Antisense, RP_050224_01_F03, Mouse strain C57BL/6J (56 days, male) 6.1
100144507 Antisense, RP_110421_03_E12, Mouse strain C57BL/6J (56 days, male) 4.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org