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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:319.2 nTPM
FANTOM5:856.9 Scaled Tags Per Million
Pig:759.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA056191
Glial cells Not detected
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

319.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 319.2
Samples: 246

Max nTPM: 894.7
Min nTPM: 23.2
Std nTPM: 178.5
Median nTPM: 311.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 894.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 760.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 735.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 728.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 707.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 698.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 675.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 654.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 650.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 649.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 633.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 625.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 622.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 622.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 616.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 609.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 595.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 581.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 576.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 574.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 574.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 572.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 567.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 567.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 562.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 562.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 558.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 550.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 547.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 544.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 543.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 534.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 534.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 532.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 527.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 523.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 521.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 520.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 518.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 516.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 515.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 514.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 512.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 512.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 500.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 494.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 484.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 483.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 480.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 477.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 475.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 473.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 473.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 463.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 454.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 453.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 453.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 452.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 447.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 445.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 441.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 439.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 434.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 432.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 430.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 430.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 429.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 416.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 412.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 411.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 410.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 410.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 406.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 405.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 402.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 399.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 398.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 398.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 396.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 396.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 395.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 395.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 392.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 392.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 391.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 389.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 388.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 387.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 386.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 380.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 379.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 377.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 375.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 373.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 372.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 371.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 367.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 367.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 366.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 365.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 357.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 356.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 354.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 352.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 350.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 348.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 348.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 347.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 346.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 343.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 341.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 337.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 334.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 334.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 334.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 333.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 325.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 324.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 322.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 321.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 318.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 317.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 312.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 309.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 309.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 306.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 305.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 304.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 302.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 298.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 296.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 294.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 293.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 293.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 291.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 291.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 286.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 283.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 280.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 278.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 277.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 275.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 273.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 273.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 272.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 272.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 270.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 270.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 269.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 265.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 263.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 261.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 261.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 260.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 260.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 254.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 253.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 252.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 249.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 247.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 247.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 238.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 237.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 232.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 232.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 230.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 224.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 217.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 216.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 210.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 203.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 202.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 197.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 195.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 193.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 190.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 189.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 189.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 183.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 182.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 175.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 171.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 171.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 169.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 166.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 160.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 160.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 155.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 154.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 154.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 152.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 150.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 150.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 150.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 145.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 137.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 136.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 134.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 131.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 128.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 126.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 123.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 122.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 122.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 122.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 121.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 117.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 110.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 107.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 102.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 101.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 100.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 100.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 99.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 96.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 91.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 90.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 90.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 89.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 88.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 86.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 86.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 78.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 77.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 77.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 76.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 75.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 71.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 66.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 65.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 64.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 64.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 61.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 53.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 52.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 51.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 49.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 46.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 39.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 36.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 35.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 30.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 29.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 29.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 23.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

856.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 856.9
FF:10164-103B2 76 years, female 856.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

759.8
Pig sample Sample description nTPM
Caudate
nTPM: 759.8
Samples: 4

Max nTPM: 912.4
Min nTPM: 687.5
Sample A Female 689.8
Sample B Female 749.5
Sample C Male 912.4
Sample D Male 687.5

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