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ARPP21
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  • ARPP21
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:508.8 nTPM
FANTOM5:1573.3 Scaled Tags Per Million
Pig:1226.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA017303
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

508.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 508.8
Samples: 246

Max nTPM: 1918.1
Min nTPM: 3.8
Std nTPM: 336.3
Median nTPM: 437.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1918.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1818.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1411.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1405.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1252.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1252.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1211.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1194.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1164.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1146.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1139.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1128.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1119.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1114.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1077.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1066.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1063.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1058.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1055.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1054.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1041.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 996.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 962.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 962.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 957.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 955.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 944.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 942.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 932.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 931.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 924.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 913.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 911.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 906.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 900.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 898.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 888.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 874.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 870.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 820.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 818.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 813.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 800.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 796.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 791.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 789.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 784.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 776.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 774.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 768.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 767.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 756.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 751.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 741.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 737.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 730.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 730.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 727.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 722.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 722.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 720.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 720.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 718.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 716.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 698.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 694.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 694.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 693.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 693.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 678.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 674.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 674.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 667.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 667.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 661.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 660.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 658.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 657.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 653.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 650.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 649.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 646.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 640.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 639.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 630.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 629.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 626.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 617.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 599.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 598.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 588.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 587.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 576.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 575.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 574.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 566.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 564.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 557.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 555.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 544.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 537.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 531.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 528.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 524.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 521.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 519.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 514.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 512.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 511.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 508.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 504.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 492.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 491.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 490.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 478.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 474.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 474.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 463.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 453.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 447.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 445.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 439.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 438.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 436.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 436.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 432.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 430.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 426.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 423.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 417.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 414.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 413.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 411.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 411.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 410.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 407.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 405.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 404.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 403.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 397.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 396.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 389.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 385.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 383.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 381.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 380.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 380.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 374.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 370.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 368.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 368.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 365.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 360.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 355.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 352.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 348.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 345.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 345.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 342.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 340.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 340.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 336.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 325.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 322.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 318.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 313.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 312.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 312.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 307.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 306.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 303.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 300.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 285.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 281.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 274.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 265.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 254.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 249.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 240.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 236.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 235.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 234.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 233.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 229.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 229.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 226.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 225.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 219.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 215.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 215.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 211.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 203.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 203.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 200.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 200.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 198.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 198.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 195.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 191.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 189.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 189.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 178.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 172.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 171.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 170.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 164.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 164.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 163.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 162.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 157.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 155.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 152.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 150.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 144.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 138.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 132.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 130.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 128.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 127.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 123.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 123.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 123.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 120.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 119.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 116.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 115.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 103.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 101.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 100.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 99.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 96.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 91.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 86.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 83.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 79.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 77.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 75.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 66.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 65.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 55.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 50.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 44.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 43.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 40.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 37.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1573.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1573.3
FF:10164-103B2 76 years, female 1573.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1226.0
Pig sample Sample description nTPM
Caudate
nTPM: 1226.1
Samples: 4

Max nTPM: 1428.5
Min nTPM: 1086.6
Sample A Female 1086.6
Sample B Female 1134.7
Sample C Male 1428.5
Sample D Male 1254.4

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