PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:68.1 nTPM
FANTOM5:73.3 Scaled Tags Per Million
Pig:42.9 nTPM
Mouse:11.4 nTPM
Allen mouse:5.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 68.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 59.4
1984 Male, age 76, both hemispheres 65.5
2188 Female, age 91, both hemispheres 61.2
2301 Female, age 85, both hemispheres 56.6
2090 Male, age 80, both hemispheres 54.4
Area postrema
nTPM: 40.0
2054 Male, age 76, both hemispheres 48.3
2306 Male, age 80, both hemispheres 38.3
2799 Male, age 61, both hemispheres 33.4
Dorsal cochlear nucleus
nTPM: 52.5
2187 Female, age 91, both hemispheres 62.3
2058 Male, age 76, both hemispheres 53.9
2802 Male, age 74, right hemisphere 53.2
2370 Male, age 61, both hemispheres 48.1
2378 Male, age 80, both hemispheres 44.8
Dorsal medullary reticular nucleus
nTPM: 61.4
2040 Female, age 85, both hemispheres 72.1
2088 Male, age 76, both hemispheres 56.4
2373 Male, age 61, both hemispheres 55.6
Dorsal motor vagal complex
nTPM: 50.8
2844 Male, age 55, unknown 64.7
2133 Female, age 91, both hemispheres 55.4
2000 Male, age 74, unknown 55.2
2813 Female, age 72, unknown 55.0
2185 Male, age 76, both hemispheres 46.5
2643 Male, age 74, both hemispheres 45.2
2807 Female, age 85, both hemispheres 44.4
2797 Male, age 61, both hemispheres 39.8
Dorsal tegmental nucleus
nTPM: 52.7
2083 Male, age 80, both hemispheres 59.4
2326 Male, age 74, both hemispheres 54.5
1936 Male, age 76, left hemisphere 51.4
2358 Male, age 61, both hemispheres 45.7
Dorsolateral tegmental area
nTPM: 55.2
2141 Male, age 76, both hemispheres 64.3
2654 Male, age 80, both hemispheres 59.7
2751 Female, age 85, both hemispheres 57.5
2360 Male, age 74, both hemispheres 49.0
2337 Male, age 61, both hemispheres 45.5
Gigantocellular reticular nuclei, medullary
nTPM: 58.3
1876 Female, age 85, both hemispheres 61.7
2314 Male, age 61, both hemispheres 60.9
2462 Male, age 74, both hemispheres 60.6
2387 Female, age 91, both hemispheres 60.0
2310 Male, age 80, both hemispheres 55.0
2022 Male, age 76, right hemisphere 51.6
Gigantocellular reticular nuclei, pars
nTPM: 62.4
2168 Male, age 76, both hemispheres 69.6
2336 Male, age 61, both hemispheres 68.9
2084 Female, age 85, both hemispheres 67.1
2330 Male, age 80, both hemispheres 53.2
2706 Male, age 80, both hemispheres 53.2
Inferior olive
nTPM: 59.6
2085 Female, age 85, both hemispheres 75.7
2563 Male, age 74, both hemispheres 57.5
2178 Male, age 61, both hemispheres 56.4
2379 Male, age 80, both hemispheres 54.4
2628 Female, age 91, both hemispheres 54.1
Kolliker-Fuse nucleus
nTPM: 53.4
2163 Male, age 80, both hemispheres 62.0
2793 Female, age 91, left hemisphere 62.0
2315 Male, age 76, right hemisphere 36.1
Lateral lemniscal nuclei
nTPM: 63.3
2036 Male, age 80, both hemispheres 67.7
2169 Male, age 76, both hemispheres 66.0
2453 Male, age 74, right hemisphere 63.5
2320 Female, age 91, left hemisphere 63.0
2746 Female, age 85, left hemisphere 56.4
Lateral medullary reticular nucleus
nTPM: 57.4
2374 Male, age 61, both hemispheres 64.1
2190 Female, age 85, both hemispheres 61.5
2305 Male, age 74, both hemispheres 57.7
2804 Female, age 91, both hemispheres 56.6
2044 Male, age 76, both hemispheres 53.2
2852 Male, age 80, both hemispheres 51.1
Lateral parabrachial nucleus
nTPM: 52.4
2139 Female, age 85, right hemisphere 58.9
2790 Male, age 61, both hemispheres 57.9
2013 Male, age 80, both hemispheres 50.6
2792 Male, age 76, both hemispheres 42.3
Lateral vestibular nucleus
nTPM: 56.8
2184 Male, age 76, both hemispheres 59.7
2311 Male, age 80, both hemispheres 53.8
Locus coeruleus
nTPM: 68.1
2014 Male, age 55, unknown 82.9
2788 Male, age 74, unknown 67.5
2317 Female, age 72, unknown 67.4
2162 Male, age 80, both hemispheres 66.9
2720 Male, age 74, both hemispheres 65.7
2123 Female, age 91, both hemispheres 64.0
1980 Male, age 76, both hemispheres 62.7
Medial olivary nucleus
nTPM: 48.1
2138 Female, age 91, both hemispheres 51.5
1962 Male, age 76, both hemispheres 49.3
2851 Male, age 80, both hemispheres 47.0
1943 Male, age 61, both hemispheres 44.6
Medial parabrachial nucleus
nTPM: 64.0
2170 Female, age 91, both hemispheres 68.4
2463 Female, age 85, right hemisphere 67.4
2786 Male, age 76, both hemispheres 63.2
2156 Male, age 61, both hemispheres 61.0
2854 Male, age 80, both hemispheres 59.9
Medial periolivary nuclei
nTPM: 59.2
2171 Female, age 85, both hemispheres 66.6
2791 Male, age 74, right hemisphere 59.9
2458 Female, age 91, both hemispheres 59.3
2063 Male, age 76, both hemispheres 57.4
2081 Male, age 80, both hemispheres 52.5
Medial vestibular nucleus
nTPM: 58.7
2801 Male, age 74, both hemispheres 65.5
2093 Male, age 80, both hemispheres 59.5
2803 Female, age 91, both hemispheres 58.9
2743 Female, age 85, both hemispheres 58.0
2134 Male, age 76, both hemispheres 56.3
2624 Male, age 61, both hemispheres 54.2
Motor facial nucleus
nTPM: 59.1
2062 Male, age 76, both hemispheres 64.3
2365 Male, age 74, right hemisphere 62.9
2126 Male, age 61, both hemispheres 58.9
2327 Male, age 80, both hemispheres 57.1
2795 Female, age 91, both hemispheres 56.7
2697 Female, age 85, both hemispheres 54.8
Motor hypoglossal nucleus
nTPM: 59.2
2125 Female, age 91, both hemispheres 63.5
2132 Female, age 85, both hemispheres 61.9
2461 Male, age 61, both hemispheres 59.3
2182 Male, age 80, both hemispheres 57.4
2277 Male, age 76, both hemispheres 53.8
Motor trigeminal nucleus
nTPM: 60.7
2560 Male, age 74, both hemispheres 66.3
2321 Female, age 91, both hemispheres 62.5
2309 Male, age 76, both hemispheres 60.0
2079 Male, age 80, both hemispheres 58.5
2335 Male, age 61, both hemispheres 56.3
Nuclei of the trapezoid body
nTPM: 62.0
2159 Male, age 61, both hemispheres 72.2
2735 Female, age 85, both hemispheres 66.8
2166 Male, age 80, both hemispheres 58.8
2368 Female, age 91, both hemispheres 58.2
1983 Male, age 76, both hemispheres 54.0
Nucleus ambiguus
nTPM: 58.1
2096 Female, age 85, both hemispheres 64.1
2071 Male, age 76, both hemispheres 52.0
Nucleus cuneatus
nTPM: 50.7
2100 Male, age 76, both hemispheres 57.1
2131 Male, age 76, both hemispheres 56.2
2564 Male, age 74, both hemispheres 52.1
2562 Male, age 61, both hemispheres 51.0
2376 Male, age 61, both hemispheres 50.7
2381 Male, age 80, both hemispheres 50.4
2805 Female, age 91, both hemispheres 49.7
2380 Male, age 80, both hemispheres 47.1
2808 Female, age 85, both hemispheres 42.4
Nucleus gracilis
nTPM: 44.0
2627 Male, age 74, both hemispheres 51.9
2382 Male, age 80, both hemispheres 45.7
2299 Female, age 85, both hemispheres 34.4
Nucleus raphe magnus
nTPM: 62.2
2160 Male, age 61, both hemispheres 73.4
2172 Female, age 85, both hemispheres 68.3
2455 Male, age 74, both hemispheres 64.1
2459 Female, age 91, both hemispheres 59.0
2328 Male, age 80, both hemispheres 57.1
2051 Male, age 76, both hemispheres 51.3
Nucleus raphe obscurus
nTPM: 60.9
2800 Male, age 61, midline 71.7
2845 Female, age 85, midline 63.9
2142 Male, age 76, midline 47.2
Nucleus raphe pallidus
nTPM: 54.3
2183 Male, age 80, midline 61.5
2145 Male, age 76, midline 54.4
1924 Male, age 61, midline 47.1
Nucleus tractus solitarii
nTPM: 46.5
2656 Male, age 76, both hemispheres 58.6
2307 Male, age 80, both hemispheres 44.7
2191 Female, age 85, both hemispheres 42.5
2144 Female, age 91, right hemisphere 40.3
Paramedian reticular nucleus
nTPM: 60.0
2050 Female, age 85, both hemispheres 65.0
2057 Male, age 80, both hemispheres 64.1
2313 Male, age 61, both hemispheres 63.2
2052 Male, age 76, both hemispheres 47.6
Parvicellular reticular nuclei
nTPM: 60.3
2558 Male, age 74, both hemispheres 65.6
2119 Male, age 80, both hemispheres 58.6
2095 Male, age 76, both hemispheres 56.8
Parvicellular reticular nuclei, medullary
nTPM: 60.1
2189 Female, age 91, both hemispheres 64.3
2181 Male, age 80, left hemisphere 58.8
2091 Female, age 85, both hemispheres 57.3
Pedunculopontine tegmental nucleus
nTPM: 58.8
1921 Female, age 85, both hemispheres 67.5
2334 Male, age 80, both hemispheres 58.3
2338 Male, age 61, both hemispheres 50.5
Peritrigeminal nucleus
nTPM: 51.9
2179 Male, age 61, both hemispheres 58.4
2067 Female, age 85, both hemispheres 48.8
2136 Male, age 76, both hemispheres 48.6
Pontine nuclei
nTPM: 64.0
2454 Male, age 74, left hemisphere 71.5
1863 Male, age 55, unknown 68.6
2727 Male, age 61, right hemisphere 68.4
2787 Female, age 85, both hemispheres 68.0
2109 Female, age 72, unknown 64.0
2319 Female, age 91, both hemispheres 59.1
1968 Male, age 76, left hemisphere 58.8
2115 Male, age 80, left hemisphere 53.5
Pontine raphe nucleus
nTPM: 62.4
2122 Female, age 85, midline 65.6
2853 Male, age 76, midline 59.3
Posteroventral cochlear nucleus
nTPM: 53.1
2752 Female, age 85, both hemispheres 64.4
2135 Female, age 91, both hemispheres 57.4
2070 Male, age 76, both hemispheres 52.7
2371 Male, age 61, both hemispheres 46.1
2341 Male, age 80, both hemispheres 44.9
Prepositus hypoglossal nucleus
nTPM: 53.6
2855 Female, age 85, right hemisphere 58.5
2086 Male, age 80, both hemispheres 48.7
Principal sensory trigeminal nucleus
nTPM: 62.9
2158 Male, age 61, both hemispheres 71.7
2008 Male, age 80, left hemisphere 62.8
2367 Female, age 91, left hemisphere 60.9
2324 Male, age 76, both hemispheres 56.4
Reticular pontine nucleus, caudal
nTPM: 60.9
2559 Male, age 74, both hemispheres 70.3
2457 Female, age 91, both hemispheres 59.6
2332 Male, age 80, right hemisphere 59.5
2092 Male, age 76, both hemispheres 54.3
Reticular pontine nucleus, oral
nTPM: 60.8
2361 Male, age 74, both hemispheres 67.8
2012 Female, age 85, both hemispheres 61.8
2167 Male, age 76, both hemispheres 58.8
2366 Female, age 91, both hemispheres 58.7
1939 Male, age 80, both hemispheres 56.9
Reticulotegmental nucleus
nTPM: 57.9
2325 Male, age 76, both hemispheres 60.5
2452 Male, age 74, both hemispheres 59.2
2322 Female, age 91, both hemispheres 58.0
2333 Male, age 80, both hemispheres 54.1
Spinal trigeminal nucleus, caudal
nTPM: 53.4
2390 Female, age 91, both hemispheres 63.1
2447 Male, age 76, both hemispheres 52.8
2312 Male, age 61, both hemispheres 52.6
2308 Male, age 80, both hemispheres 49.6
2642 Male, age 74, both hemispheres 49.0
Spinal trigeminal nucleus, interpolar
nTPM: 57.3
2625 Male, age 61, both hemispheres 65.9
2389 Female, age 91, both hemispheres 56.7
2066 Male, age 76, right hemisphere 55.5
2386 Female, age 85, both hemispheres 54.6
2033 Male, age 80, both hemispheres 54.0
Spinal trigeminal nucleus, oral
nTPM: 58.5
2737 Female, age 85, both hemispheres 62.3
1978 Male, age 76, both hemispheres 56.8
2164 Male, age 80, both hemispheres 56.3
Spinal vestibular nucleus
nTPM: 57.0
2186 Female, age 91, both hemispheres 62.4
2384 Male, age 74, both hemispheres 61.0
2780 Male, age 80, both hemispheres 57.8
2806 Female, age 85, both hemispheres 57.4
2748 Male, age 76, both hemispheres 54.7
2796 Male, age 61, both hemispheres 48.8
Subcoeruleus area
nTPM: 60.1
2089 Male, age 76, left hemisphere 65.0
2323 Female, age 91, left hemisphere 61.9
1958 Male, age 80, both hemispheres 60.7
2451 Male, age 74, both hemispheres 56.5
2369 Female, age 85, left hemisphere 56.3
Superior olive
nTPM: 60.2
1875 Female, age 85, both hemispheres 63.6
2364 Male, age 74, right hemisphere 61.9
2561 Female, age 91, both hemispheres 59.7
2329 Male, age 80, right hemisphere 59.4
2020 Male, age 76, both hemispheres 56.4
Superior vestibular nucleus
nTPM: 49.8
2015 Male, age 80, both hemispheres 51.8
2061 Male, age 76, both hemispheres 51.0
2383 Male, age 74, both hemispheres 46.7
Ventral medullary reticular nucleus
nTPM: 61.4
2372 Male, age 61, both hemispheres 61.9
2060 Male, age 76, both hemispheres 60.8
Ventral periolivary nuclei
nTPM: 59.2
2130 Female, age 85, both hemispheres 67.9
2165 Male, age 80, both hemispheres 60.3
2794 Female, age 91, left hemisphere 57.4
2023 Male, age 76, both hemispheres 51.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 53.8
2180 Male, age 61, both hemispheres 60.2
2118 Male, age 80, both hemispheres 53.6
2302 Female, age 91, both hemispheres 53.3
2741 Female, age 85, both hemispheres 53.2
1986 Male, age 76, both hemispheres 48.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 58.3
2449 Male, age 74, both hemispheres 64.6
2359 Male, age 61, both hemispheres 59.2
2456 Female, age 91, both hemispheres 57.4
1959 Male, age 76, both hemispheres 57.3
2840 Female, age 85, both hemispheres 56.8
2161 Male, age 80, both hemispheres 54.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 73.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 53.6
FF:10165-103B3 76 years, female 54.8
FF:10182-103D2 60 years, female 52.4
Medulla oblongata
Scaled Tags Per Million: 47.3
FF:10038-101F2 18-64 years, mixed 68.2
FF:10155-103A2 76 years, female 49.2
FF:10174-103C3 60 years, female 24.4
Pons
Scaled Tags Per Million: 73.3
FF:10033-101E6 18-54 years, mixed 73.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 42.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 35.1
Samples: 4

Max nTPM: 42.1
Min nTPM: 29.9
Sample A Female 42.1
Sample B Female 32.8
Sample C Male 35.7
Sample D Male 29.9
Pons
nTPM: 42.9
Samples: 4

Max nTPM: 57.7
Min nTPM: 33.7
Sample A Female 57.7
Sample B Female 41.2
Sample C Male 39.0
Sample D Male 33.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 11.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 11.4
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.0
Sample A Male 13.3
Sample B Male 10.4
Sample C Female 10.0
Sample D Female 11.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.6
69013450 Antisense, RP_050309_02_D09, Mouse strain C57BL/6J (56 days, male) 6.1
70787131 Antisense, RP_050706_03_G05, Mouse strain C57BL/6J (56 days, male) 5.2
Pons
Expression energy: 5.4
69013450 Antisense, RP_050309_02_D09, Mouse strain C57BL/6J (56 days, male) 5.7
70787131 Antisense, RP_050706_03_G05, Mouse strain C57BL/6J (56 days, male) 5.1

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