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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:62.6 nTPM
FANTOM5:70.9 Scaled Tags Per Million
Pig:26.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068416
Glial cells Medium
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 62.6
Samples: 246

Max nTPM: 400.0
Min nTPM: 28.3
Std nTPM: 34.5
Median nTPM: 54.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 400.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 235.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 214.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 190.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 168.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 149.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 141.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 137.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 133.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 132.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 129.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 125.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 118.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 116.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 101.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 100.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 94.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 94.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 94.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 93.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 90.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 89.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 88.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 87.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 86.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 85.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 85.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 84.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 83.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 83.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 82.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 82.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 80.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 78.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 78.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 78.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 77.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 76.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 75.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 75.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 75.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 74.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 74.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 74.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 72.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 72.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 71.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 71.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 71.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 70.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 69.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 69.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 68.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 67.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 67.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 65.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 65.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 65.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 65.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 64.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 64.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 64.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 64.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 63.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 63.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 63.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 63.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 63.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 62.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 62.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 62.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 62.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 62.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 61.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 61.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 61.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 60.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 60.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 60.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 60.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 60.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 59.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 59.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 59.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 58.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 58.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 58.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 58.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 58.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 58.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 58.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 57.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 57.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 57.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 56.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 56.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 56.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 56.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 56.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 56.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 56.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 55.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 55.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 55.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 55.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 55.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 55.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 54.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 54.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 54.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 54.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 54.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 54.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 54.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 54.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 53.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 53.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 53.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 53.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 53.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 53.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 53.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 53.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 53.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 53.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 53.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 52.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 52.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 51.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 51.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 51.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 51.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 51.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 51.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 51.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 51.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 50.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 50.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 50.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 50.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 50.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 50.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 50.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 49.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 49.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 49.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 49.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 48.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 48.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 48.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 48.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 48.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 48.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 48.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 48.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 48.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 48.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 48.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 47.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 47.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 47.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 47.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 47.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 47.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 47.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 47.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 47.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 47.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 46.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 46.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 46.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 46.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 45.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 45.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 45.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 45.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 45.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 44.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 44.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 44.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 44.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 44.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 43.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 43.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 43.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 43.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 43.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 42.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 42.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 42.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 42.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 42.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 42.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 41.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 41.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 41.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 41.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 41.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 40.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 39.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 39.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 39.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 38.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 38.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 38.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 38.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 38.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 37.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 37.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 37.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 36.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 35.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 35.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 35.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 33.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 33.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 32.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 32.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 28.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

70.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 70.9
FF:10164-103B2 76 years, female 70.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.1
Pig sample Sample description nTPM
Caudate
nTPM: 26.1
Samples: 4

Max nTPM: 27.5
Min nTPM: 23.2
Sample A Female 23.2
Sample B Female 27.5
Sample C Male 27.2
Sample D Male 26.4

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