PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:227.3 nTPM
FANTOM5:333.6 Scaled Tags Per Million
Pig:283.5 nTPM
Mouse:302.8 nTPM
Allen mouse:7.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 227.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 149.1
2301 Female, age 85, both hemispheres 176.0
2188 Female, age 91, both hemispheres 152.3
2090 Male, age 80, both hemispheres 136.3
1984 Male, age 76, both hemispheres 132.0
Area postrema
nTPM: 116.0
2054 Male, age 76, both hemispheres 129.4
2799 Male, age 61, both hemispheres 114.0
2306 Male, age 80, both hemispheres 104.6
Dorsal cochlear nucleus
nTPM: 141.4
2187 Female, age 91, both hemispheres 160.1
2802 Male, age 74, right hemisphere 143.3
2058 Male, age 76, both hemispheres 142.8
2370 Male, age 61, both hemispheres 133.3
2378 Male, age 80, both hemispheres 127.7
Dorsal medullary reticular nucleus
nTPM: 161.3
2040 Female, age 85, both hemispheres 220.5
2373 Male, age 61, both hemispheres 138.8
2088 Male, age 76, both hemispheres 124.6
Dorsal motor vagal complex
nTPM: 141.1
2133 Female, age 91, both hemispheres 182.7
2000 Male, age 74, unknown 180.4
2844 Male, age 55, unknown 155.4
2813 Female, age 72, unknown 153.4
2643 Male, age 74, both hemispheres 145.9
2797 Male, age 61, both hemispheres 111.2
2185 Male, age 76, both hemispheres 104.6
2807 Female, age 85, both hemispheres 95.5
Dorsal tegmental nucleus
nTPM: 147.8
2083 Male, age 80, both hemispheres 168.5
2326 Male, age 74, both hemispheres 151.2
1936 Male, age 76, left hemisphere 138.3
2358 Male, age 61, both hemispheres 133.1
Dorsolateral tegmental area
nTPM: 147.7
2751 Female, age 85, both hemispheres 168.3
2654 Male, age 80, both hemispheres 164.7
2360 Male, age 74, both hemispheres 152.2
2141 Male, age 76, both hemispheres 135.9
2337 Male, age 61, both hemispheres 117.6
Gigantocellular reticular nuclei, medullary
nTPM: 163.7
2462 Male, age 74, both hemispheres 201.0
1876 Female, age 85, both hemispheres 172.3
2387 Female, age 91, both hemispheres 160.3
2022 Male, age 76, right hemisphere 154.7
2310 Male, age 80, both hemispheres 150.1
2314 Male, age 61, both hemispheres 144.0
Gigantocellular reticular nuclei, pars
nTPM: 164.0
2168 Male, age 76, both hemispheres 212.4
2084 Female, age 85, both hemispheres 178.9
2336 Male, age 61, both hemispheres 148.1
2706 Male, age 80, both hemispheres 143.6
2330 Male, age 80, both hemispheres 136.9
Inferior olive
nTPM: 151.2
2563 Male, age 74, both hemispheres 194.6
2085 Female, age 85, both hemispheres 164.0
2628 Female, age 91, both hemispheres 144.7
2178 Male, age 61, both hemispheres 132.7
2379 Male, age 80, both hemispheres 120.3
Kolliker-Fuse nucleus
nTPM: 167.3
2163 Male, age 80, both hemispheres 174.7
2793 Female, age 91, left hemisphere 173.1
2315 Male, age 76, right hemisphere 154.2
Lateral lemniscal nuclei
nTPM: 189.8
2169 Male, age 76, both hemispheres 218.9
2036 Male, age 80, both hemispheres 204.4
2746 Female, age 85, left hemisphere 194.9
2453 Male, age 74, right hemisphere 174.7
2320 Female, age 91, left hemisphere 156.2
Lateral medullary reticular nucleus
nTPM: 158.4
2044 Male, age 76, both hemispheres 217.7
2305 Male, age 74, both hemispheres 168.5
2374 Male, age 61, both hemispheres 144.7
2804 Female, age 91, both hemispheres 142.3
2852 Male, age 80, both hemispheres 141.8
2190 Female, age 85, both hemispheres 135.5
Lateral parabrachial nucleus
nTPM: 166.1
2139 Female, age 85, right hemisphere 214.6
2013 Male, age 80, both hemispheres 164.0
2790 Male, age 61, both hemispheres 143.4
2792 Male, age 76, both hemispheres 142.4
Lateral vestibular nucleus
nTPM: 150.9
2184 Male, age 76, both hemispheres 161.2
2311 Male, age 80, both hemispheres 140.6
Locus coeruleus
nTPM: 195.7
2014 Male, age 55, unknown 234.2
2123 Female, age 91, both hemispheres 228.7
2788 Male, age 74, unknown 195.5
2720 Male, age 74, both hemispheres 190.6
2162 Male, age 80, both hemispheres 175.1
2317 Female, age 72, unknown 173.0
1980 Male, age 76, both hemispheres 172.6
Medial olivary nucleus
nTPM: 142.7
2138 Female, age 91, both hemispheres 149.2
1962 Male, age 76, both hemispheres 146.0
2851 Male, age 80, both hemispheres 144.1
1943 Male, age 61, both hemispheres 131.6
Medial parabrachial nucleus
nTPM: 162.5
2854 Male, age 80, both hemispheres 189.0
2170 Female, age 91, both hemispheres 169.1
2463 Female, age 85, right hemisphere 165.0
2156 Male, age 61, both hemispheres 148.4
2786 Male, age 76, both hemispheres 141.1
Medial periolivary nuclei
nTPM: 189.5
2171 Female, age 85, both hemispheres 259.2
2063 Male, age 76, both hemispheres 229.8
2791 Male, age 74, right hemisphere 177.6
2081 Male, age 80, both hemispheres 144.4
2458 Female, age 91, both hemispheres 136.5
Medial vestibular nucleus
nTPM: 184.9
2743 Female, age 85, both hemispheres 201.3
2801 Male, age 74, both hemispheres 189.6
2803 Female, age 91, both hemispheres 188.9
2624 Male, age 61, both hemispheres 188.0
2134 Male, age 76, both hemispheres 172.0
2093 Male, age 80, both hemispheres 169.8
Motor facial nucleus
nTPM: 189.6
2062 Male, age 76, both hemispheres 252.4
2697 Female, age 85, both hemispheres 194.5
2365 Male, age 74, right hemisphere 181.9
2327 Male, age 80, both hemispheres 180.2
2126 Male, age 61, both hemispheres 174.3
2795 Female, age 91, both hemispheres 154.3
Motor hypoglossal nucleus
nTPM: 170.2
2125 Female, age 91, both hemispheres 210.4
2132 Female, age 85, both hemispheres 186.0
2461 Male, age 61, both hemispheres 181.1
2182 Male, age 80, both hemispheres 150.5
2277 Male, age 76, both hemispheres 123.2
Motor trigeminal nucleus
nTPM: 157.4
2560 Male, age 74, both hemispheres 181.3
2079 Male, age 80, both hemispheres 179.6
2309 Male, age 76, both hemispheres 144.8
2335 Male, age 61, both hemispheres 142.3
2321 Female, age 91, both hemispheres 139.0
Nuclei of the trapezoid body
nTPM: 211.0
2159 Male, age 61, both hemispheres 262.6
2735 Female, age 85, both hemispheres 261.4
1983 Male, age 76, both hemispheres 224.3
2166 Male, age 80, both hemispheres 164.4
2368 Female, age 91, both hemispheres 142.5
Nucleus ambiguus
nTPM: 176.4
2096 Female, age 85, both hemispheres 222.9
2071 Male, age 76, both hemispheres 129.9
Nucleus cuneatus
nTPM: 133.5
2564 Male, age 74, both hemispheres 187.4
2131 Male, age 76, both hemispheres 150.5
2376 Male, age 61, both hemispheres 147.5
2562 Male, age 61, both hemispheres 138.5
2100 Male, age 76, both hemispheres 126.0
2381 Male, age 80, both hemispheres 121.4
2380 Male, age 80, both hemispheres 119.0
2808 Female, age 85, both hemispheres 108.9
2805 Female, age 91, both hemispheres 102.5
Nucleus gracilis
nTPM: 122.8
2627 Male, age 74, both hemispheres 169.7
2382 Male, age 80, both hemispheres 114.2
2299 Female, age 85, both hemispheres 84.5
Nucleus raphe magnus
nTPM: 211.0
2160 Male, age 61, both hemispheres 312.2
2172 Female, age 85, both hemispheres 250.8
2455 Male, age 74, both hemispheres 196.5
2051 Male, age 76, both hemispheres 184.4
2328 Male, age 80, both hemispheres 174.0
2459 Female, age 91, both hemispheres 148.0
Nucleus raphe obscurus
nTPM: 143.2
2845 Female, age 85, midline 165.1
2800 Male, age 61, midline 149.8
2142 Male, age 76, midline 114.8
Nucleus raphe pallidus
nTPM: 158.6
1924 Male, age 61, midline 178.1
2183 Male, age 80, midline 174.7
2145 Male, age 76, midline 123.0
Nucleus tractus solitarii
nTPM: 138.6
2144 Female, age 91, right hemisphere 195.2
2656 Male, age 76, both hemispheres 146.8
2307 Male, age 80, both hemispheres 106.7
2191 Female, age 85, both hemispheres 105.6
Paramedian reticular nucleus
nTPM: 199.1
2050 Female, age 85, both hemispheres 239.4
2057 Male, age 80, both hemispheres 194.3
2313 Male, age 61, both hemispheres 184.1
2052 Male, age 76, both hemispheres 178.6
Parvicellular reticular nuclei
nTPM: 164.7
2095 Male, age 76, both hemispheres 172.9
2119 Male, age 80, both hemispheres 164.1
2558 Male, age 74, both hemispheres 157.1
Parvicellular reticular nuclei, medullary
nTPM: 162.0
2189 Female, age 91, both hemispheres 178.5
2091 Female, age 85, both hemispheres 170.1
2181 Male, age 80, left hemisphere 137.5
Pedunculopontine tegmental nucleus
nTPM: 160.7
2334 Male, age 80, both hemispheres 172.3
1921 Female, age 85, both hemispheres 157.6
2338 Male, age 61, both hemispheres 152.1
Peritrigeminal nucleus
nTPM: 186.3
2179 Male, age 61, both hemispheres 191.1
2136 Male, age 76, both hemispheres 190.1
2067 Female, age 85, both hemispheres 177.7
Pontine nuclei
nTPM: 227.3
2727 Male, age 61, right hemisphere 306.4
1863 Male, age 55, unknown 284.2
2787 Female, age 85, both hemispheres 268.5
2109 Female, age 72, unknown 248.5
1968 Male, age 76, left hemisphere 211.5
2454 Male, age 74, left hemisphere 188.0
2319 Female, age 91, both hemispheres 161.2
2115 Male, age 80, left hemisphere 150.1
Pontine raphe nucleus
nTPM: 190.1
2122 Female, age 85, midline 222.6
2853 Male, age 76, midline 157.6
Posteroventral cochlear nucleus
nTPM: 152.3
2752 Female, age 85, both hemispheres 199.8
2070 Male, age 76, both hemispheres 159.5
2341 Male, age 80, both hemispheres 137.9
2135 Female, age 91, both hemispheres 133.3
2371 Male, age 61, both hemispheres 131.1
Prepositus hypoglossal nucleus
nTPM: 168.1
2855 Female, age 85, right hemisphere 186.5
2086 Male, age 80, both hemispheres 149.7
Principal sensory trigeminal nucleus
nTPM: 197.0
2158 Male, age 61, both hemispheres 277.2
2008 Male, age 80, left hemisphere 199.3
2367 Female, age 91, left hemisphere 158.4
2324 Male, age 76, both hemispheres 153.0
Reticular pontine nucleus, caudal
nTPM: 171.6
2092 Male, age 76, both hemispheres 185.4
2332 Male, age 80, right hemisphere 181.8
2559 Male, age 74, both hemispheres 171.8
2457 Female, age 91, both hemispheres 147.3
Reticular pontine nucleus, oral
nTPM: 180.6
2361 Male, age 74, both hemispheres 238.2
2012 Female, age 85, both hemispheres 204.0
1939 Male, age 80, both hemispheres 161.4
2366 Female, age 91, both hemispheres 149.9
2167 Male, age 76, both hemispheres 149.3
Reticulotegmental nucleus
nTPM: 164.0
2325 Male, age 76, both hemispheres 180.8
2452 Male, age 74, both hemispheres 167.9
2333 Male, age 80, both hemispheres 153.8
2322 Female, age 91, both hemispheres 153.6
Spinal trigeminal nucleus, caudal
nTPM: 158.1
2390 Female, age 91, both hemispheres 202.9
2447 Male, age 76, both hemispheres 162.6
2642 Male, age 74, both hemispheres 150.0
2312 Male, age 61, both hemispheres 145.2
2308 Male, age 80, both hemispheres 129.9
Spinal trigeminal nucleus, interpolar
nTPM: 202.3
2066 Male, age 76, right hemisphere 270.7
2625 Male, age 61, both hemispheres 231.5
2389 Female, age 91, both hemispheres 181.8
2033 Male, age 80, both hemispheres 177.5
2386 Female, age 85, both hemispheres 149.9
Spinal trigeminal nucleus, oral
nTPM: 156.8
2737 Female, age 85, both hemispheres 171.3
2164 Male, age 80, both hemispheres 159.7
1978 Male, age 76, both hemispheres 139.4
Spinal vestibular nucleus
nTPM: 165.8
2806 Female, age 85, both hemispheres 175.8
2384 Male, age 74, both hemispheres 172.0
2186 Female, age 91, both hemispheres 170.0
2780 Male, age 80, both hemispheres 167.8
2748 Male, age 76, both hemispheres 156.3
2796 Male, age 61, both hemispheres 153.1
Subcoeruleus area
nTPM: 168.0
1958 Male, age 80, both hemispheres 187.3
2323 Female, age 91, left hemisphere 177.5
2089 Male, age 76, left hemisphere 164.0
2451 Male, age 74, both hemispheres 155.8
2369 Female, age 85, left hemisphere 155.1
Superior olive
nTPM: 184.8
1875 Female, age 85, both hemispheres 237.8
2364 Male, age 74, right hemisphere 190.7
2020 Male, age 76, both hemispheres 185.0
2329 Male, age 80, right hemisphere 162.5
2561 Female, age 91, both hemispheres 148.0
Superior vestibular nucleus
nTPM: 153.4
2383 Male, age 74, both hemispheres 162.2
2015 Male, age 80, both hemispheres 153.2
2061 Male, age 76, both hemispheres 144.8
Ventral medullary reticular nucleus
nTPM: 151.0
2060 Male, age 76, both hemispheres 157.3
2372 Male, age 61, both hemispheres 144.7
Ventral periolivary nuclei
nTPM: 193.6
2130 Female, age 85, both hemispheres 229.1
2165 Male, age 80, both hemispheres 199.3
2023 Male, age 76, both hemispheres 194.8
2794 Female, age 91, left hemisphere 151.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 164.6
2741 Female, age 85, both hemispheres 198.6
1986 Male, age 76, both hemispheres 191.4
2180 Male, age 61, both hemispheres 159.8
2302 Female, age 91, both hemispheres 140.8
2118 Male, age 80, both hemispheres 132.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 166.8
2840 Female, age 85, both hemispheres 194.7
1959 Male, age 76, both hemispheres 184.6
2449 Male, age 74, both hemispheres 177.5
2161 Male, age 80, both hemispheres 162.4
2359 Male, age 61, both hemispheres 146.3
2456 Female, age 91, both hemispheres 135.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 333.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 131.9
FF:10182-103D2 60 years, female 146.6
FF:10165-103B3 76 years, female 117.2
Medulla oblongata
Scaled Tags Per Million: 122.1
FF:10038-101F2 18-64 years, mixed 146.1
FF:10155-103A2 76 years, female 136.8
FF:10174-103C3 60 years, female 83.3
Pons
Scaled Tags Per Million: 333.6
FF:10033-101E6 18-54 years, mixed 333.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 283.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 209.6
Samples: 4

Max nTPM: 252.7
Min nTPM: 188.1
Sample A Female 252.7
Sample B Female 198.9
Sample C Male 198.5
Sample D Male 188.1
Pons
nTPM: 283.5
Samples: 4

Max nTPM: 446.6
Min nTPM: 178.1
Sample A Female 446.6
Sample B Female 178.1
Sample C Male 238.8
Sample D Male 270.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 302.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 302.8
Samples: 4

Max nTPM: 317.4
Min nTPM: 290.3
Sample A Male 290.3
Sample B Male 309.2
Sample C Female 294.4
Sample D Female 317.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 7.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.4
74047909 Antisense, RP_051214_02_C06, Mouse strain C57BL/6J (56 days, male) 12.5
532748 Antisense, RP_040825_02_A11, Mouse strain C57BL/6J (56 days, male) 2.3
Pons
Expression energy: 7.8
74047909 Antisense, RP_051214_02_C06, Mouse strain C57BL/6J (56 days, male) 12.7
532748 Antisense, RP_040825_02_A11, Mouse strain C57BL/6J (56 days, male) 2.8

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